Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_442:239713-239804 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_5058.ps.pdf
Locus Name: Cluster_5058
CUGAGAAUGAUCUGAAGAAUUAUGGAGAUCGAGGAUGGCAUUAUUGACAACACCCUCCUCGAUCUCCAUAAUUUUUCAGAUGAUAUGAAAGC
......((.((((((((((((((((((((((((((.((..............)).)))))))))))))))))))))))))).))........ (-45.20)
...................UUAUGGAGAUCGAGGAUGGCAgU.................................................. len:23 al:1
...................UUAUGGAGAgCGAGGAUGGCAU................................................... len:22 al:4
...................UUAUGGAGAUCGAGGAUGGCAUUuUU............................................... len:26 al:1
...................UUAUGGAGAUCGAGGAUGGCAUU.................................................. len:23 al:36
...................UUAUGGAGAgCGAGGAUGGCAUU.................................................. len:23 al:3
...................UUAUGGAGAUCGAGGAUGGCAc................................................... len:22 al:1
...................UUAUGGAGAgCGAGGAUGGCAUUA................................................. len:24 al:2
...................UUAUGGAGAgCGAGGAUG....................................................... len:18 al:1
...................UUAUGGAGAUCGAGGAUGGCAU................................................... len:22 al:1
....................UAUGGAGAUCGAGGAUGGCAUUA................................................. len:23 al:2
....................UAUGGAGAUCGAGGAUGaCAUU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAUGGCgUU.................................................. len:22 al:3
....................UAUGGAGAUCGgGGAUGGCAUU.................................................. len:22 al:5
....................UAUGGAGAUCGAGGAUGGCAUUAcU............................................... len:25 al:1
....................UAUGGAGAgCGAGGAUGGC..................................................... len:19 al:1
....................UAUGGAGAUCGAGGAUGGCAaU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAUGGCAUa.................................................. len:22 al:2
....................UAUGGAGAgCGAGGAUGGCAU................................................... len:21 al:3
....................UAUGGAGcUCGAGGAUGGCAUU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAUGGCA.................................................... len:20 al:1
....................UAUGGAGAUCGAGGAUGGuAUU.................................................. len:22 al:1
....................UAUGaAGAUCGAGGAUGGCAUU.................................................. len:22 al:1
....................UAUGGAGuUCGAGGAUGGCAUU.................................................. len:22 al:1
....................UgUGGAGAUCGAGGAUGGCAU................................................... len:21 al:2
....................UAUGGAGAUCGAGGAUGGCAUUu................................................. len:23 al:34
....................UAUGGuGAUCGAGGAUGGCAUU.................................................. len:22 al:1
....................cAUGGAGAUCGAGGAUGGCAUU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAUGGCAU................................................... len:21 al:81
....................UAUGGAGAgCGAGGAUGGCAUUAUUGAC............................................ len:28 al:1
....................UAUGGAGAUCGAGGAUGG...................................................... len:18 al:8
....................UAUGGAGAUCGAGGAUGGCAcU.................................................. len:22 al:2
....................UAUGGAGAUCGAGGgUGGCAU................................................... len:21 al:2
....................UAUGGgGAUCGAGGAUGGCAUU.................................................. len:22 al:7
....................UAUGGAGAUCGAGGAUGGCAUUuU................................................ len:24 al:2
....................UgUGGAGAUCGAGGAUGGCAUU.................................................. len:22 al:6
....................UAUGGAGgUCGAGGAUGGCAUU.................................................. len:22 al:8
....................UAUGGAGAUCGAGGAUGGa..................................................... len:19 al:1
....................UAUGGAGAUCGAGGAUGGCAUU.................................................. len:22 al:819
....................UAUGGAGAUCGAGGgUGGCAUU.................................................. len:22 al:2
....................UAUGGAGAUCGAGGAUG....................................................... len:17 al:1
....................UAUGGAGAgCGAGGAUGGCAUU.................................................. len:22 al:7
....................UAUGGgGAUCGAGGAUGGCAU................................................... len:21 al:1
....................UAUGGAGAUCGAGGAUGGCAUUc................................................. len:23 al:3
....................UAUGGAGAUCGAGGAUGGCAUUAU................................................ len:24 al:3
....................aAUGGAGAUCGAGGAUGGCAUU.................................................. len:22 al:3
....................UAUGGAGAUCGAGGAUGGCAgU.................................................. len:22 al:6
....................UAUGGAGAUCGAGGAUGGC..................................................... len:19 al:26
....................UAUGGAGAUCaAGGAUGGCAUU.................................................. len:22 al:1
....................UAUGGcGAUCGAGGAUGGCAUU.................................................. len:22 al:1
....................gAUGGAGAUCGAGGAUGGCAUU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAUGGCAc................................................... len:21 al:17
....................UAUGGAGAUCGAGGAUGGCAUc.................................................. len:22 al:102
....................UAUGGAGAUCGAGaAUGGCAUU.................................................. len:22 al:1
....................UAUGGAGAUCGAGGAcGGCAUU.................................................. len:22 al:4
.....................AUGGAGAgCGAGGAUGGCAUU.................................................. len:21 al:2
......................UGGAGAUCGAGGAUGGCAU................................................... len:19 al:8
......................UGGAGAUCGAGGAUGGCAUU.................................................. len:20 al:7
......................UGGAGAUCGAGGAUGGuAU................................................... len:19 al:1
........................................UUAUUGACAACACCCUCCUCGAUCUCCAUAA..................... len:31 al:1
.........................................UAUUGACAACACCCUCCUCGAUCU........................... len:24 al:2
.........................................UAUUGACAACACCCUCCUCGAUCUCCAUAAU.................... len:31 al:2
..........................................AUUGACAACACCCUCCUCGAUCUCCAUAAc.................... len:30 al:2
..........................................AUUGACAACACCCUCCUCGAUCUCCgUAAUU................... len:31 al:1
..........................................AUUGACAACACCCcCCUCGAUCUCCAUAAU.................... len:30 al:1
..........................................AUUGACAACACCCUCCUCGAUCUCCAUAAU.................... len:30 al:16
..........................................AUUGACAACACCCUCCUCGAUCUCCAUgAUU................... len:31 al:1
..........................................AUUGACAACACCCUCCUCGAUCUCCAUAA..................... len:29 al:1
...........................................UUGACAACACCCUCCUCGAUCUCCAUAAUU................... len:30 al:1
...........................................UUGACAACACCCUCCUCGAUCUCCAUAAU.................... len:29 al:1
...........................................UaGACAACACCCUCCUCGAUCUCCAUAAU.................... len:29 al:1
.............................................GACAACACCCUCCUCGAUCUCCAUAAU.................... len:27 al:6
..................................................CACCCUCCUCGAUCUCCAUAAUUU.................. len:24 al:1
..................................................CACCCUCCUCGAUCUCCAUAAU.................... len:22 al:7
......................................................CUCCUCGAUCUCCAUAAUUU.................. len:20 al:4
......................................................CUCCcCGAUCUCCAUAAUUU.................. len:20 al:2