Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_316:88262-88355 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_4160.ps.pdf
Locus Name: Cluster_4160
UGAAGCUGCUCAAGUUACUUGCAGGAAUUUUCCGCGGGUAGUUUUUGCACUCCCCGCCAGGAAUUCUUGUAGUAACUGGAGAAAUGAUGUACAU
........(((.(((((((.(((((((((((..(((((.(((......))).)))))..)))))))))))))))))).)))............. (-35.00)
..................UUGCAGGAAUUUUCCGCGGGUAGU.................................................... len:24 al:2
...................UGCAGGAAUUUUCCGCGGGU....................................................... len:20 al:2
...................UGCAGGAAUUUUCCGCGGGc....................................................... len:20 al:1
....................GCAGGAAUUUUCCGCGGGUAGUUaUU................................................ len:26 al:1
....................GCAGGAAUUUUCCGCGGGUAGg.................................................... len:22 al:1
....................GCAGGAAUUUUCCGCGGGg....................................................... len:19 al:1
....................GCAGGAAUUUUCCGCGGGUAGU.................................................... len:22 al:64
....................GCAGGAAUUUUCCGCGGGUAGgU................................................... len:23 al:1
....................aCAGGAAUUUUCCGCGGGUAGU.................................................... len:22 al:1
....................GCAGGAAUUUUCCGCGGGUAa..................................................... len:21 al:4
....................GCAGGAAUUUUCCGCGGGUAGUa................................................... len:23 al:8
....................GCAGGAAUUUUCCGCGGGUAGa.................................................... len:22 al:1
....................GCAGGAAUUUUCCGCGGGUAGc.................................................... len:22 al:12
....................GCAGGAAUUUUCCGCGGGUAGUU................................................... len:23 al:9
....................GCAGGAAUUUUCCGCGGGUA...................................................... len:20 al:1
....................GCAGGAAUUUUCCGCGGGUAG..................................................... len:21 al:6
.....................CAGGAAUUUUCCGCGGGUAGa.................................................... len:21 al:1
.....................CAGGAAUUUUCCGCGGGUAGU.................................................... len:21 al:2
.....................CAGGAAUUUUCCGCGGGUAGUa................................................... len:22 al:1
......................AGGAAUUUUCCGCGGGUAGUaUU................................................. len:23 al:1
..........................AUUUUCCGCGGGUAGUUUUUGCA............................................. len:23 al:1
...........................UUUUCCGCGGGUAGUUUUUGCA............................................. len:22 al:6
.............................UUCCGCGGGUAGUUUUUGCACU........................................... len:22 al:2
..............................UCCGCGGGUAGUUUUUGCg............................................. len:19 al:1
..............................UCCGCGGGUAGUUUUUGCACc........................................... len:21 al:3
..............................UCCGCGGGUAGUUUUUGCACU........................................... len:21 al:7
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUU.......................... len:28 al:4
........................................GUUUUUGCAuUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:1
........................................GUcUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:1
........................................GUUUUUGCACUCCCCGuCAGGAAUUCUUGUA....................... len:31 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAcUCUUGUA....................... len:31 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:235
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUUGUg....................... len:31 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUc.......................... len:28 al:2
........................................GUUcUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUCU........................... len:27 al:1
........................................GUUUUUGCACUCCCCGCuAGGAAUUCUUGUA....................... len:31 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUuUUGU........................ len:30 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUUGU........................ len:30 al:17
........................................GUUUUUGCACUCCCCGCCgGGAAUUCUUGUA....................... len:31 al:3
........................................GUUUUUGCgCUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:4
........................................aUUUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:31 al:2
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUUGc........................ len:30 al:1
........................................GUUUUUGCACUCCCCGCCAGGAAUUCUUGa........................ len:30 al:1
.........................................UUUUUGCACUCCCCGCCgGGAAUUCUUGUA....................... len:30 al:1
.........................................UUUUUGCACUCCCCGCCAGGAAUUCUUGU........................ len:29 al:10
.........................................UUUUUGCACUCCCCGCCAGGAAUUCUUGUg....................... len:30 al:1
.........................................UUUUUGCACUCCCCGCCAGGAAUUgUUGU........................ len:29 al:1
.........................................UUUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:30 al:41
.........................................UUUUUGuACUCCCCGCCAGGAAUUCUUGU........................ len:29 al:2
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAGU..................... len:31 al:18
..........................................UUUUGCACUCCuCGCCAGGAAUUCUUGU........................ len:28 al:2
..........................................UUUcGCACUCCCCGCCAGGAAUUCUUGUA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAa...................... len:30 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGc........................ len:28 al:8
..........................................UUUUGCACUCCCCGCCAGGAAcUCUUGU........................ len:28 al:1
..........................................UUcUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGgA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCcUGUA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUC............................ len:24 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAaU..................... len:31 al:7
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAuU..................... len:31 al:419
..........................................cUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:29 al:2
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAG...................... len:30 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGU........................ len:28 al:28
..........................................UUUUGCACUCCCCGCCAGGAAUUCUU.......................... len:26 al:3
..........................................UUUUGCACUCCCCGCCAGGAAUUCUcGUA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:29 al:107
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAc...................... len:30 al:2
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUu....................... len:29 al:2
..........................................UUUUGCACUCCCCGCCgGGAAUUCUUGUAGU..................... len:31 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUg....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAu...................... len:30 al:59
..........................................UUUUGuACUCCCCGCCAGGAAUUCUUGUA....................... len:29 al:1
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAGc..................... len:31 al:5
..........................................UUUUGCACUCCCCGCCAGGAAUUCUUGUAcU..................... len:31 al:15
...........................................UUUGuACUCCCCGCCAGGAAUUCUUGUA....................... len:28 al:1
...........................................UUcGCACUCCCCGCCAGGAAUUCUUGUA....................... len:28 al:1
...........................................UUUGCACUCCCCGCCAGGAAUUCUU.......................... len:25 al:1
...........................................UUUGCACUCCCCGCCAGGAAUUCUUGUA....................... len:28 al:4
...........................................UUUGCACUCCCCGCCAGGAAUUCUUGUAuU..................... len:30 al:1
............................................UUGCACUCCCCGCCAGGAAUUCUUGUAuU..................... len:29 al:2
.............................................UGCACUCCCCGCCAGGAAUUCUUGUA....................... len:26 al:2
..............................................GCACUCCCCGCCAGGAAUUCUUGUA....................... len:25 al:2
.................................................CUCCCCGCCAGGAAUUCUUGUAc...................... len:23 al:2
.................................................CUCCCCGCCAGGAAUUCUUGUAu...................... len:23 al:12
.................................................CUCCCCGCCAGGAAUUCUUGUAuU..................... len:24 al:2
..................................................UCCCCGCCAGGAAUUCUUaU........................ len:20 al:3
..................................................UCCCCGCCgGGAAUUCUUGUA....................... len:21 al:9
..................................................UCCCCGCCAGGAAUUCUcG......................... len:19 al:6
..................................................UCCCCGCCAGGAAUUCaUGU........................ len:20 al:1
..................................................UCCCCGCCAGGAAcUCUUGUAG...................... len:22 al:1
..................................................UCCCCGCCAGGgAUUCUUGUAGU..................... len:23 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAGUA.................... len:24 al:9
..................................................UCCCCGCCAGGAAUUCUUGa........................ len:20 al:47
..................................................UuCCCGCCAGGAAUUCUUGU........................ len:20 al:2
..................................................UCCCCGCaAGGAAUUCUU.......................... len:18 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAGUc.................... len:24 al:4
..................................................UCCCCGCCuGGAAUUCUUGU........................ len:20 al:5
..................................................UCCCCGCCAGGAAUUCUUGUAGg..................... len:23 al:6
..................................................UCCCCGCCAGGAAUUuUUG......................... len:19 al:1
..................................................UCCCCGCCAGGAAUUCUa.......................... len:18 al:1
..................................................UCCCCGCCAGGcAUUCUUGU........................ len:20 al:1
..................................................UCCCCGCCAGGAAcUCUUGUAGU..................... len:23 al:2
..................................................UCCCCGCCAGGAgUUCUUGU........................ len:20 al:10
..................................................UCCCCGCCAGGAAUUCUUGUc....................... len:21 al:42
..................................................UCCCCGCCAGGAAUUCUUGUgGU..................... len:23 al:3
..................................................cCCCCGCCAGGAAUUCUUGUAGU..................... len:23 al:5
..................................................UCCCgGCCAGGAAUUCUUGUA....................... len:21 al:1
..................................................UCCCCGaCAGGAAUUCUUGU........................ len:20 al:1
..................................................UCCCCGuCAGGAAUUCUUGUA....................... len:21 al:3
..................................................UCCCCGCCAGGAgUUCUUGUA....................... len:21 al:4
..................................................UuCCCGCCAGGAAUUCUUGUAGU..................... len:23 al:4
..................................................UCCCCGCCAGGAAUUCUUGUAuUAA................... len:25 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAaU..................... len:23 al:229
..................................................UCCCCGuCAGGAAUUCUU.......................... len:18 al:1
..................................................UCCCCGCCAGGAAUUCUUGUuG...................... len:22 al:1
..................................................UCCCCcCCAGGAAUUCUUG......................... len:19 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAGaA.................... len:24 al:1
..................................................UCCCCGCCcGGAAUUCUUGU........................ len:20 al:1
..................................................aCCCCGCCAGGAAUUCUUGU........................ len:20 al:6
..................................................UCCCCGCCAGGAAUU............................. len:15 al:3
..................................................UCCCCGCCgGGAAUUCUUGU........................ len:20 al:9
..................................................UCCCCaCCAGGAAUUCUUGUAGU..................... len:23 al:1
..................................................UCuCCGCCAGGAAUUCUUGU........................ len:20 al:2
..................................................UCCuCGCCAGGAAUUCUUGU........................ len:20 al:2
..................................................UCCCCGCCAGGAAUUCUU.......................... len:18 al:311
..................................................cCCCCGCCAGGAAUUCUUGUA....................... len:21 al:7
..................................................UCCCCGCaAGGAAUUCUUGUAGU..................... len:23 al:1
..................................................UCCCCGCuAGGAAUUCUU.......................... len:18 al:2
..................................................UCCCCGCCAGGAAUUCUUGUg....................... len:21 al:14
..................................................UCCCCGCCAGGAAUUCUUGUAGc..................... len:23 al:74
..................................................UCCaCGCCAGGAAUUCUUGU........................ len:20 al:1
..................................................UCCCCGCCAGGgAUUCUU.......................... len:18 al:1
..................................................UCCCCGCCAGGAgUUCUUGUAGU..................... len:23 al:2
..................................................aCCCCGCCAGGAAUUCUUGUAGU..................... len:23 al:3
..................................................UCCCCGCCAGGAAUUCUUGUu....................... len:21 al:363
..................................................UCCCCaCCAGGAAUUCUUGU........................ len:20 al:4
..................................................UCCCCGCCAGGAAUUCUUGUuGU..................... len:23 al:2
..................................................UCCCCGCCAGGAAUUCUc.......................... len:18 al:21
..................................................UCCCCGCCAGuAAUUCUUGU........................ len:20 al:1
..................................................UCCCCGCCAGGAAUUCUUG......................... len:19 al:619
..................................................UCCCCGCCAGGAAUUCUUGU........................ len:20 al:2491
..................................................UCCCCGCCAGGAAcUCUUGUA....................... len:21 al:2
..................................................UCCCCGCCuGGAAUUCUUGUAGU..................... len:23 al:1
..................................................UCCCCGCCAGGAAUUCg........................... len:17 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAa...................... len:22 al:111
..................................................UCCCCGCCAGGgAUUCUUG......................... len:19 al:3
..................................................UCCCCGCCAGGAuUUCUUGUA....................... len:21 al:2
..................................................UCCCCGCCAGGAAcUCUU.......................... len:18 al:8
..................................................UCCCCGCCAGGAAUUCcUGUA....................... len:21 al:8
..................................................UCCCuGCCAGGAAUUCUUGUA....................... len:21 al:1
..................................................UCCCCGCCAGGgAUUCUUGU........................ len:20 al:10
..................................................UCCCCGCCAGGAAUUCUUa......................... len:19 al:27
..................................................UCCCCaCCAGGAAUUCUUGUA....................... len:21 al:1
..................................................UCCCCGCCAGGgAUUCUUGUA....................... len:21 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAG...................... len:22 al:33
..................................................aCCCCGCCAGGAAUUCUUGUA....................... len:21 al:4
..................................................UCCCCaCCAGGAAUUCUU.......................... len:18 al:1
..................................................UCCCCGCCAaGAAUUCUUGUA....................... len:21 al:1
..................................................UuCCCGCCAGGAAUUCUUGUA....................... len:21 al:1
..................................................UCCCuGCCAGGAAUUCUUGU........................ len:20 al:7
..................................................UCCCCGuCAGGAAUUCUUGU........................ len:20 al:2
..................................................UCCCCGCCAGGAAUUCcUGUAGU..................... len:23 al:3
..................................................UCCCCGCCAGGAAUUC............................ len:16 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAcUA.................... len:24 al:1
..................................................UCCCCGCCAGGAAUUCUUGUA....................... len:21 al:1230
..................................................UCCCCGCCAGGAAUUCUUGUAGa..................... len:23 al:17
..................................................aCCCCGCCAGGAAUUCUU.......................... len:18 al:1
..................................................aCCCCGCCAGGAAUUCUUG......................... len:19 al:4
..................................................UCCCCGCCAGGAAUUCUUGUAcU..................... len:23 al:3648
..................................................UCCCCGCCAGGAAUUCUUGUAGUu.................... len:24 al:22
..................................................UCCCCGCCAGGAAUUCc........................... len:17 al:3
..................................................UCCCCGCCAGGAAUUCUUGUAaUA.................... len:24 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAuU..................... len:23 al:24066
..................................................UCCCCGCCAGGuAUUCUUGU........................ len:20 al:1
..................................................UCaCCGCCAGGAAUUCUUGU........................ len:20 al:1
..................................................UaCCCGCCAGGAAUUCUUGUA....................... len:21 al:1
..................................................UCCCCGCCAGGAcUUCUUGU........................ len:20 al:1
..................................................UCCCCGCCAGGAAUUCUcGU........................ len:20 al:3
..................................................UCCCCGCCAGGAAUUCUUGUAGU..................... len:23 al:739
..................................................cCCCCGCCAGGAAUUCUUGU........................ len:20 al:7
..................................................UCCCCGCCAGGAAUcCUUGUA....................... len:21 al:6
..................................................UCCCCGCCAGGAAUUCUUGaA....................... len:21 al:11
..................................................UCCCCGCCAGGAAUUCUg.......................... len:18 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAuUA.................... len:24 al:119
..................................................UCCCCGCCAGGAAUUCUUGcA....................... len:21 al:4
..................................................UCCCCGCCAGGAAUUaUUGUA....................... len:21 al:1
..................................................UCCCCGCCAGaAAUUCUUGUA....................... len:21 al:2
..................................................UCCCCGCCAGGAgUUCUUG......................... len:19 al:2
..................................................UCCCCGCCAGGAAUUCU........................... len:17 al:41
..................................................UCCCCGCCAGGAAUUCUaG......................... len:19 al:1
..................................................UCCCCGCCgGGAAUUCUUG......................... len:19 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAu...................... len:22 al:5717
..................................................UCCCCGCCAGGAAUUCcUGU........................ len:20 al:8
..................................................UCCCCGCCAGGAAUUCUUaUA....................... len:21 al:1
..................................................UCCCCGCCuGGAAUUCUUGUA....................... len:21 al:2
..................................................UCCCCGCCAGGAAUcCUUGU........................ len:20 al:7
..................................................UCCCCGCCAGGAAUaCUUGUAGU..................... len:23 al:1
..................................................UCCCCGCCAaGAAUUCUUGU........................ len:20 al:3
..................................................UCCCCGCCcGGAAUUCUUG......................... len:19 al:1
..................................................UCCCCGCCAGGAAUUCUUGUAGUAc................... len:25 al:1
..................................................UCuCCGCCAGGAAUUCUUGUAGU..................... len:23 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAc...................... len:22 al:693
..................................................UCCCCGCCAGGAAUUCUUuU........................ len:20 al:4
..................................................UCCCCGCCAGGAAUUCUUGg........................ len:20 al:29
..................................................UCCCCGCCAGGAAUUCUUu......................... len:19 al:4
..................................................UCCCCGCCAGGAAUUCgU.......................... len:18 al:1
..................................................UCCCCGCCAGGAAUUCUcGUA....................... len:21 al:3
..................................................UCCCCGCCAGGAAUUCUUGUAGgA.................... len:24 al:1
..................................................UCCCCGCCAGGAAUcCUUG......................... len:19 al:2
..................................................UCCCCGCCAGGAAUUCUUGUAGUAu................... len:25 al:2
..................................................UCCCCGCCAGGAAcUCUUGU........................ len:20 al:9
..................................................UCCCuGCCAGGAAUUCUUGUAGU..................... len:23 al:3
..................................................UCCCCGCCAGGAAUUCUcGUAGU..................... len:23 al:4
..................................................UCCCCGCCAGGAAUUCUUGc........................ len:20 al:371
..................................................UCCCCGCCuGGAAUUCUU.......................... len:18 al:1
..................................................UCCCCGCCAGGAAUUCUUGgA....................... len:21 al:5
...................................................CCCCGCCAGGAAUUCUUGUu....................... len:20 al:4
...................................................CCCCGCCAGGAAUUCUcGU........................ len:19 al:1
...................................................CCCCGCCAGGAAUUC............................ len:15 al:5
...................................................CCCCGCCAGGAAUUCUUGUAaU..................... len:22 al:2
...................................................CCCCGCCAGGAAUUCUU.......................... len:17 al:1
...................................................CCCCGCCAGGAAUUCUUGUAuU..................... len:22 al:240
...................................................CCCCGCCAGGAAUUCUUGcA....................... len:20 al:1
...................................................CCCCGCCAGGAAUUCUUGUAu...................... len:21 al:53
...................................................CCCCGCCAGGAAUUCU........................... len:16 al:6
...................................................CCCCGCCAGGAAUUCUUGg........................ len:19 al:1
...................................................CCCCGCCAGGAAUUCUUa......................... len:18 al:6
...................................................CCCCGCCAGGAAUUCUUGUAGU..................... len:22 al:8
...................................................CCCCGCCAGGAAUUCUUGc........................ len:19 al:10
...................................................CCCCGCCAGGAAUUCUUGUAcU..................... len:22 al:22
...................................................CCCCGCCAGGAAUUuUUGU........................ len:19 al:1
...................................................CCCCGCCAGGAAUUCUUGUA....................... len:20 al:20
...................................................CCCCGCCAGGAAcUCUUG......................... len:18 al:2
...................................................CCCCGCCAGGgAUUCUUGUA....................... len:20 al:1
...................................................uCCCGCCAGGAAUUCUUGU........................ len:19 al:9
...................................................CCCCGCCAGGAAUUCUUGUAc...................... len:21 al:6
...................................................CCCCGCCAGGAAUUCUUGa........................ len:19 al:1
...................................................CCCCGCCAGGAAUUCUUG......................... len:18 al:51
...................................................CCCCGCCAGGAAUUCUUGgA....................... len:20 al:1
...................................................uCCCGCCAGGAAUUCUUGUA....................... len:20 al:4
...................................................CCCCGCCAGGAAUUCUUGU........................ len:19 al:75
...................................................CCCCGCCAGGAAUUCUUGUAuUA.................... len:23 al:2
...................................................CCCCGCCAGGAAUUCUUGUAa...................... len:21 al:1
...................................................CCCCGCCAGGAgUUCUUGU........................ len:19 al:1
....................................................CCCGCCAGGAAUUCUUGU........................ len:18 al:14
....................................................CCCGCCAGGAAUUCUUGUAu...................... len:20 al:7
....................................................CCCGCCAGGAAUUCUUGUu....................... len:19 al:1
....................................................CCCGCCAGGAAUUCUUGUA....................... len:19 al:6
....................................................CCCGCCAGGAAUUCUUGc........................ len:18 al:2
....................................................CCCGCCAGGAAUUCUUGUAGU..................... len:21 al:3
....................................................CCCGCCAGGAAUUCUUGa........................ len:18 al:1
....................................................CCCGCCAGGAAUUCUU.......................... len:16 al:1
....................................................CCCGCCAGGAAUUCUUGUAuU..................... len:21 al:74
....................................................CCCGCCAGGAAUUCUUGUAcU..................... len:21 al:6
.....................................................CCGCCAGGAAUUCUUGUAc...................... len:19 al:1
.....................................................CCGCCAGGAAUUCUUGUA....................... len:18 al:1
.....................................................CCGCCAGGAAUUCUUGUAu...................... len:19 al:5
.....................................................CCGCCAGGAAUUCUUGUAcU..................... len:20 al:3
.....................................................CCGCCAGGAAUUCUUGUAuU..................... len:20 al:20
......................................................CGCCAGGAAUUCUUGUAu...................... len:18 al:2
......................................................CGCCAGGAAUUCUUGUAuU..................... len:19 al:47
......................................................CGCCAGGAAUUCUUGUA....................... len:17 al:1
.......................................................GCCAGGAAUUCUUGUAuU..................... len:18 al:2
........................................................CCAGGAAUUCUUGUA....................... len:15 al:1
..........................................................AGGAAUUCUUGUAGU..................... len:15 al:1
.......................................................................GUAACUGGAGAAAUGAUGa.... len:19 al:1
.......................................................................GUAACUGGAGAAAUGAUGc.... len:19 al:3
.......................................................................GUAACUGGAGAAAUGAUGUACA. len:22 al:2
.......................................................................GUAACUGGAGAAAUGAUGUA... len:20 al:3
.......................................................................GUAgCUGGAGAAAUGAUG..... len:18 al:1
.......................................................................GUAACUGGAGAAAUGAUGUACAa len:23 al:1
.......................................................................GUAgCUGGAGAAAUGAUGUACAU len:23 al:1
.......................................................................GUAACUGGAGAAAUGAUGUACAU len:23 al:11
.......................................................................GUAACcGGAGAAAUGAUGUACAU len:23 al:1
.......................................................................GUAACUGGAGAAAUGAUG..... len:18 al:4
.......................................................................GUAACUGGAGAAAUGAUGU.... len:19 al:13
.......................................................................GUAACaGGAGAAAUGAUGU.... len:19 al:1