Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_3072:29428-29521 plus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_13926.ps.pdf
Locus Name: Cluster_13926
CAUAAGCUGACUGUGUGUGCAACUUUCACUGGUUAAAAACUCCUUUACGUGAAUUUUUAGCCCGCGGAAGUUGCGUAAACAGAUCUUUUUCACA
........((((((.((((((((((((.(.(((((((((.((........)).))))))))).).)))))))))))).)))).))......... (-29.00)
....................AACUUUCACUGGUUAAAAACUu.................................................... len:22 al:4
....................cACUUUCACUGGUUAAAAACUC.................................................... len:22 al:1
....................AACUUUCACUGGUUAAAAACUCa................................................... len:23 al:4
....................AACUUUCACUGGUUAAAAACUC.................................................... len:22 al:29
....................AACUUUCACUGGUUAAAAACUCu................................................... len:23 al:1
.....................ACUUUCACUGGUUAAAAACUCC................................................... len:22 al:2
.....................ACUUUCACUGGUUAAAAACUCa................................................... len:22 al:1
.....................ACUUUCACUGGUUAAAAACUCu................................................... len:22 al:3
.....................ACUUUCACUGGUUAAAAACUC.................................................... len:21 al:3
.....................ACUUUCACUGGUUAAAAACUu.................................................... len:21 al:2
....................................................AUUUUUAGCCCGCGGAAGUUGC.................... len:22 al:963
....................................................AUUUUUAGCCCGCGGAAGUUG..................... len:21 al:5
....................................................AUUUUUAGCCCGCGGgAGUUGC.................... len:22 al:1
....................................................AUUUUcAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGg.................... len:22 al:2
....................................................AUUUUUAGCCCGCGGAAGcUGC.................... len:22 al:1
....................................................AcUUUUAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGu.................... len:22 al:283
....................................................AUUUUUAGCCCGCGGAuGUUGC.................... len:22 al:1
....................................................cUUUUUAGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGU....................... len:19 al:5
....................................................AUUUUUAGCCCGCGGAAGUcGC.................... len:22 al:1
....................................................gUUUUUAGCCCGCGGAAGUUGC.................... len:22 al:6
....................................................AUUUUUcGCCCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUc...................... len:20 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGCc................... len:23 al:33
....................................................AUUUUUAGCCuGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGaUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUU...................... len:20 al:16
....................................................AUUUUUAGCuCGCGGAAGUUGC.................... len:22 al:1
....................................................AUUUUUAGCCCGCGGAAGUUGCu................... len:23 al:190
....................................................AUUUUUAGCCCGCGGAAGUUGCG................... len:23 al:15
....................................................AUUUUUAGCCCGCGGAAGUUGa.................... len:22 al:18
....................................................AUUUUUAGCCCGCGGAgGUUGC.................... len:22 al:7
....................................................AUUUUUgGCCCGCGGAAGUUGC.................... len:22 al:6
.....................................................UUUUUAGCCCGCGGAAGUUGC.................... len:21 al:7
.....................................................UUUUUAGCCCGCGGAAGU....................... len:18 al:1
......................................................UUUUAGCCCGCGGAAGUUG..................... len:19 al:1
......................................................UUUUAGCCCGCGGAAGUUGCu................... len:21 al:1
......................................................UUUUAGCCCGCGGAAGUUGu.................... len:20 al:2
......................................................UUUUAGCCCGCGGAAGUUGC.................... len:20 al:5
.......................................................UUUAGCCCGCGGAAGUUGCc................... len:20 al:1
.......................................................UUUAGCCCGCGGAAGUUGCu................... len:20 al:1