Genome: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1954:5675-5770 minus
PDF file name: /home/shared/8TB_HDD_02/shedurkin/timeseries_molecular/E-Peve/output/08-Peve-sRNA-discovery-ShortStack/ShortStack_out/strucVis/Cluster_11615.ps.pdf
Locus Name: Cluster_11615
ACAGACUAGCCUCCCACGUAGGCGUUUUUAGGGGAGCUCGUUUUUCAUCAAACGAGCUCCCUUAAAAACGACGGCGUGGGAGGCUACGAACAGACU
......(((((((((((((...(((((((((((((((((((((......)))))))))))))))))))))...))))))))))))).......... (-61.80)
................CGUAGGCGUUUUUAGGGGAG............................................................ len:20 al:1
....................GGCGUUUUUAGGGGAGCUCGUU...................................................... len:22 al:2
...................................................ACGAGCUCCCUUAAAAACGAC........................ len:21 al:2
...................................................ACGAGCUCCCUUAAAAACGACG....................... len:22 al:3
...................................................ACGAGCUCCCUUAAAAACGACGG...................... len:23 al:48
...................................................ACGAGCUCCCUUAAAAACGACa....................... len:22 al:1
...................................................ACGAGCUCCCUUAAAAACGAu........................ len:21 al:1
...................................................ACGAGCUCCCUUAAAAACGA......................... len:20 al:6
...................................................ACGAGCUCCCUUAAAAACGACc....................... len:22 al:2
...................................................ACGAGCUCCCUUAAAAACGACGGC..................... len:24 al:1
...................................................ACGAGuUCCCUUAAAAACGACGG...................... len:23 al:1
...................................................ACGAGCUCCCUUAAAAACGACu....................... len:22 al:2
...................................................AuGAGCUCCCUUAAAAACGACGG...................... len:23 al:1
...................................................ACGAGCUCCCUUAAAAACGACGu...................... len:23 al:2
...................................................ACGAGCUCCCUUAAAAACGACGGu..................... len:24 al:1
...................................................ACGAGCUCCCUUAAAAACGACGc...................... len:23 al:1
...................................................ACGAGCUCCCUUAAAAACGACGa...................... len:23 al:7
....................................................uGAGCUCCCUUAAAAACGACGG...................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACuGC..................... len:23 al:1
....................................................CGAGCUCCCUUAAAAACGA......................... len:19 al:12
....................................................CGAGCUCCCUUAAAAACGAu........................ len:20 al:1
....................................................CGAGCUCCCUUAAAAgCGACGG...................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGAaGG...................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGGg..................... len:23 al:1
....................................................CGAGCUCCCUUAAAAACGACGu...................... len:22 al:57
....................................................CGAGCUCCCUUAAAAACGACG....................... len:21 al:10
....................................................CGAGCUCCCUUAAAAACGACc....................... len:21 al:5
....................................................CGAGCUCCCUUAAAAACG.......................... len:18 al:1
....................................................CGAGCUCCCUUAAAAACGACcG...................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGc...................... len:22 al:8
....................................................CGAGCUCCCUUAAAAACaACGGC..................... len:23 al:1
....................................................CGAGCUCCCUUAAAAACGACGG...................... len:22 al:274
....................................................aGAGCUCCCUUAAAAACGACGG...................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGAC........................ len:20 al:10
....................................................CGAGCcCCCUUAAAAACGACGG...................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACGGa..................... len:23 al:9
....................................................CGAGCUCCCUUAAAAACGgCGG...................... len:22 al:2
....................................................CGcGCUCCCUUAAAAACGAC........................ len:20 al:1
....................................................CGAGCUCCCUUAAAAACGACu....................... len:21 al:1
....................................................CGAGCUCCCUUAAAAACGACa....................... len:21 al:1
....................................................CGAGCUCCCUUAgAAACGACGG...................... len:22 al:2
....................................................CGAGCUCCCUUAAAAACGACuG...................... len:22 al:2
....................................................CaAGCUCCCUUAAAAACGACGG...................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGGu..................... len:23 al:41
....................................................CGAGCUCCCUUAAAAACGACGGC..................... len:23 al:12
....................................................CGAaCUCCCUUAAAAACGACGG...................... len:22 al:1
....................................................CGAGCUCCCUUcAAAACGACGG...................... len:22 al:1
....................................................CGAGCUCCCUUAAAAACGACGa...................... len:22 al:48
.....................................................GAGCUCCCUUAAAAACGACGG...................... len:21 al:3
.....................................................GAGCUCCCUUcAAAACGACGG...................... len:21 al:1