Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 1A11_R1_001 1A11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3239089.0 485.8 Mbp 0.0 150.0 64.0 23.52267257754268 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1A11_R2_001 1A11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3239089.0 485.8 Mbp 0.0 150.0 68.0 23.153691050632556 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1A7_R1_001 1A7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11922215.0 1.7 Gbp 0.0 150.0 71.0 14.566346843100803 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1A7_R2_001 1A7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11922215.0 1.7 Gbp 0.0 150.0 68.0 13.710576842031088 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B3_R1_001 1B3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45754.0 6.8 Mbp 0.0 150.0 72.0 14.237006600515803 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1B3_R2_001 1B3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45754.0 6.8 Mbp 0.0 150.0 76.0 10.667919744721772 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1B4_R1_001 1B4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21471113.0 3.2 Gbp 0.0 150.0 68.0 31.09053872889608 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1B4_R2_001 1B4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21471113.0 3.2 Gbp 0.0 150.0 68.0 29.001821809502932 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1B6_R1_001 1B6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2512999.0 376.9 Mbp 0.0 150.0 64.0 26.197450616841238 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 1B6_R2_001 1B6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2512999.0 376.9 Mbp 0.0 150.0 67.0 25.728190392828886 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1B7_R1_001 1B7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 269760.0 40.4 Mbp 0.0 150.0 71.0 14.087336892052193 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1B7_R2_001 1B7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 269760.0 40.4 Mbp 0.0 150.0 74.0 11.497627520759194 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1C11_R1_001 1C11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 4323.0 648.4 kbp 0.0 150.0 73.0 25.32963219986121 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1C11_R2_001 1C11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 4323.0 648.4 kbp 0.0 150.0 75.0 16.331251445755264 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1C12_R1_001 1C12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2243794.0 336.5 Mbp 0.0 150.0 65.0 35.33650397894632 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1C12_R2_001 1C12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2243794.0 336.5 Mbp 0.0 150.0 68.0 34.627127232646075 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1C5_R1_001 1C5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39214111.0 5.8 Gbp 0.0 150.0 65.0 11.406690452838491 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1C5_R2_001 1C5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39214111.0 5.8 Gbp 0.0 150.0 68.0 11.898957832437453 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1C6_R1_001 1C6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 145390.0 21.8 Mbp 0.0 150.0 59.0 68.74131645917876 150.0 150 pass pass fail pass fail pass pass pass warn fail fail 1C6_R2_001 1C6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 145390.0 21.8 Mbp 0.0 150.0 60.0 65.69915399958731 150.0 150 pass pass fail pass fail fail pass pass warn fail fail 1D12_R1_001 1D12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 314677.0 47.2 Mbp 0.0 150.0 73.0 15.038912917054631 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1D12_R2_001 1D12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 314677.0 47.2 Mbp 0.0 150.0 73.0 13.320325285928112 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1D1_R1_001 1D1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17347410.0 2.6 Gbp 0.0 150.0 73.0 17.507714276890432 150.0 150 pass warn fail pass fail fail pass pass fail warn fail 1D1_R2_001 1D1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17347410.0 2.6 Gbp 0.0 150.0 69.0 16.221470107915334 150.0 150 pass pass warn pass fail pass pass pass fail warn fail 1D2_R1_001 1D2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42652107.0 6.3 Gbp 0.0 150.0 67.0 13.229086914381954 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1D2_R2_001 1D2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42652107.0 6.3 Gbp 0.0 150.0 68.0 13.758678915540107 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1D5_R1_001 1D5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20050766.0 3 Gbp 0.0 150.0 70.0 23.91984672992776 150.0 150 pass warn warn pass fail warn pass pass fail fail fail 1D5_R2_001 1D5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20050766.0 3 Gbp 0.0 150.0 68.0 22.05402872274891 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1D7_R1_001 1D7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10826531.0 1.6 Gbp 0.0 150.0 69.0 17.31580619915107 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1D7_R2_001 1D7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10826531.0 1.6 Gbp 0.0 150.0 67.0 16.933750312075396 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1E7_R1_001 1E7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 271172.0 40.6 Mbp 0.0 150.0 71.0 16.843184399569278 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1E7_R2_001 1E7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 271172.0 40.6 Mbp 0.0 150.0 74.0 13.791615653533551 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1F10_R1_001 1F10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 6281555.0 942.2 Mbp 0.0 150.0 65.0 22.29112665396242 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1F10_R2_001 1F10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 6281555.0 942.2 Mbp 0.0 150.0 68.0 21.353342992159256 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1F12_R1_001 1F12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41248264.0 6.1 Gbp 0.0 150.0 66.0 14.9927787783836 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1F12_R2_001 1F12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41248264.0 6.1 Gbp 0.0 150.0 67.0 15.038476577380392 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1F1_R1_001 1F1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 436846.0 65.5 Mbp 0.0 150.0 68.0 23.17993948200734 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1F1_R2_001 1F1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 436846.0 65.5 Mbp 0.0 150.0 68.0 23.03670969629979 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1F3_R1_001 1F3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49934377.0 7.4 Gbp 0.0 150.0 64.0 8.31936301190435 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1F3_R2_001 1F3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 49934377.0 7.4 Gbp 0.0 150.0 67.0 8.297474035393368 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1F6_R1_001 1F6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18903290.0 2.8 Gbp 0.0 150.0 71.0 20.892034139750557 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1F6_R2_001 1F6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18903290.0 2.8 Gbp 0.0 150.0 67.0 18.53767582024231 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1F7_R1_001 1F7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3607654.0 541.1 Mbp 0.0 150.0 65.0 16.180038756099247 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1F7_R2_001 1F7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3607654.0 541.1 Mbp 0.0 150.0 67.0 13.725995785089577 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1G10_R1_001 1G10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39812148.0 5.9 Gbp 0.0 150.0 67.0 10.109550708258002 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1G10_R2_001 1G10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39812148.0 5.9 Gbp 0.0 150.0 68.0 9.772357395632195 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1G1_R1_001 1G1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43795569.0 6.5 Gbp 0.0 150.0 64.0 13.520952792154345 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1G1_R2_001 1G1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43795569.0 6.5 Gbp 0.0 150.0 68.0 14.078944802439683 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1G3_R1_001 1G3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1627005.0 244 Mbp 0.0 150.0 67.0 16.19306306269254 150.0 150 pass warn warn pass fail fail pass pass fail fail fail 1G3_R2_001 1G3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1627005.0 244 Mbp 0.0 150.0 69.0 15.56245314768395 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1H1_R1_001 1H1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3188669.0 478.3 Mbp 0.0 150.0 65.0 16.667843359781205 150.0 150 pass warn warn pass fail fail pass pass fail fail fail 1H1_R2_001 1H1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3188669.0 478.3 Mbp 0.0 150.0 68.0 16.136797760283567 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1H2_R1_001 1H2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1171673.0 175.7 Mbp 0.0 150.0 65.0 15.538543917365994 150.0 150 pass warn warn pass fail fail pass pass fail fail fail 1H2_R2_001 1H2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1171673.0 175.7 Mbp 0.0 150.0 68.0 14.584972645358615 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 1H3_R1_001 1H3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1881714.0 282.2 Mbp 0.0 150.0 64.0 12.40916655700161 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 1H3_R2_001 1H3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 1881714.0 282.2 Mbp 0.0 150.0 68.0 11.973605756030626 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 2A3_R1_001 2A3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2432495.0 364.8 Mbp 0.0 150.0 79.0 12.318458267792124 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2A3_R2_001 2A3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 2432495.0 364.8 Mbp 0.0 150.0 77.0 10.50371443093236 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2B1_R1_001 2B1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17656021.0 2.6 Gbp 0.0 150.0 65.0 22.308212838262012 150.0 150 pass fail pass pass fail warn pass pass fail fail fail 2B1_R2_001 2B1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17656021.0 2.6 Gbp 0.0 150.0 67.0 22.038164484152272 150.0 150 pass pass pass pass fail warn pass pass fail fail fail 2D1_R1_001 2D1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16065514.0 2.4 Gbp 0.0 150.0 71.0 10.917305792189898 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 2D1_R2_001 2D1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16065514.0 2.4 Gbp 0.0 150.0 68.0 10.459632754627167 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2D3_R1_001 2D3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3037939.0 455.6 Mbp 0.0 150.0 81.0 9.310058702444564 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2D3_R2_001 2D3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 3037939.0 455.6 Mbp 0.0 150.0 77.0 7.692745933113038 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2E1_R1_001 2E1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16734587.0 2.5 Gbp 0.0 150.0 71.0 7.610946974176709 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 2E1_R2_001 2E1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16734587.0 2.5 Gbp 0.0 150.0 69.0 7.160074897289494 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2E3_R1_001 2E3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 445.0 66.7 kbp 0.0 150.0 56.0 90.3370786516854 150.0 150 pass pass fail pass fail warn pass pass pass fail fail 2E3_R2_001 2E3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 445.0 66.7 kbp 0.0 150.0 57.0 89.43820224719101 150.0 150 pass pass fail pass fail warn pass pass pass fail fail 2F2_R1_001 2F2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 106837.0 16 Mbp 0.0 150.0 70.0 45.121072287690595 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 2F2_R2_001 2F2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 106837.0 16 Mbp 0.0 150.0 70.0 42.70243454982825 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 2H1_R1_001 2H1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15270.0 2.2 Mbp 0.0 150.0 71.0 42.206941715782584 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 2H1_R2_001 2H1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15270.0 2.2 Mbp 0.0 150.0 70.0 40.897184020956125 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 2H2_R1_001 2H2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20324284.0 3 Gbp 0.0 150.0 69.0 16.7520931269942 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2H2_R2_001 2H2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20324284.0 3 Gbp 0.0 150.0 68.0 14.773303428954707 150.0 150 pass pass pass pass fail fail pass pass fail fail fail