Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content POR-216-TP1_R1_001 POR-216-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35492251.0 5.3 Gbp 0.0 150.0 20.0 82.11263307832478 150.0 150 pass pass pass pass fail pass pass pass pass pass pass POR-216-TP1_R2_001 POR-216-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35492251.0 5.3 Gbp 0.0 150.0 20.0 81.90534867621648 150.0 150 pass pass pass pass fail fail pass pass pass warn warn POR-216-TP2_R1_001 POR-216-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46107103.0 6.9 Gbp 0.0 150.0 21.0 83.03936397832688 150.0 150 pass pass fail pass fail pass pass pass pass pass warn POR-216-TP2_R2_001 POR-216-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 46107103.0 6.9 Gbp 0.0 150.0 20.0 82.6709747876615 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-216-TP3_R1_001 POR-216-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44697292.0 6.7 Gbp 0.0 150.0 20.0 80.95094957432887 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-216-TP3_R2_001 POR-216-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44697292.0 6.7 Gbp 0.0 150.0 20.0 80.4462720339908 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-216-TP4_R1_001 POR-216-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42571547.0 6.3 Gbp 0.0 150.0 20.0 83.5615447971408 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-216-TP4_R2_001 POR-216-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42571547.0 6.3 Gbp 0.0 150.0 20.0 82.86680696915398 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-236-TP1_R1_001 POR-236-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 25015877.0 3.7 Gbp 0.0 150.0 20.0 79.81497615468105 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-236-TP1_R2_001 POR-236-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 25015877.0 3.7 Gbp 0.0 150.0 20.0 79.20686689655231 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-236-TP2_R1_001 POR-236-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38181076.0 5.7 Gbp 0.0 150.0 20.0 82.39927184491222 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-236-TP2_R2_001 POR-236-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38181076.0 5.7 Gbp 0.0 150.0 20.0 81.7257791939411 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-245-TP1_R1_001 POR-245-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44030302.0 6.6 Gbp 0.0 150.0 20.0 78.43620781443674 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-245-TP1_R2_001 POR-245-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 44030302.0 6.6 Gbp 0.0 150.0 20.0 78.42428125173797 150.0 150 pass pass pass pass fail fail pass pass pass warn warn POR-245-TP2_R1_001 POR-245-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34920046.0 5.2 Gbp 0.0 150.0 20.0 82.05519781506271 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-245-TP2_R2_001 POR-245-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34920046.0 5.2 Gbp 0.0 150.0 20.0 81.60880891018657 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-245-TP3_R1_001 POR-245-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42298983.0 6.3 Gbp 0.0 150.0 20.0 83.19246551026305 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-245-TP3_R2_001 POR-245-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42298983.0 6.3 Gbp 0.0 150.0 20.0 82.59944216196288 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-245-TP4_R1_001 POR-245-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39026893.0 5.8 Gbp 0.0 150.0 20.0 82.6137803107595 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-245-TP4_R2_001 POR-245-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 39026893.0 5.8 Gbp 0.0 150.0 20.0 81.99289826971281 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-260-TP1_R1_001 POR-260-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37266118.0 5.5 Gbp 0.0 150.0 20.0 83.1117490845108 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-260-TP1_R2_001 POR-260-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37266118.0 5.5 Gbp 0.0 150.0 20.0 82.36472463120452 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-260-TP2_R1_001 POR-260-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31687059.0 4.7 Gbp 0.0 150.0 20.0 77.6367791564172 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-260-TP2_R2_001 POR-260-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31687059.0 4.7 Gbp 0.0 150.0 20.0 77.13510401006978 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-260-TP3_R1_001 POR-260-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34184567.0 5.1 Gbp 0.0 150.0 20.0 77.99535901088043 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-260-TP3_R2_001 POR-260-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34184567.0 5.1 Gbp 0.0 150.0 20.0 77.46767321534503 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-260-TP4_R1_001 POR-260-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38965762.0 5.8 Gbp 0.0 150.0 20.0 83.58328290710617 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-260-TP4_R2_001 POR-260-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38965762.0 5.8 Gbp 0.0 150.0 20.0 82.7351493627505 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-262-TP1_R1_001 POR-262-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40270304.0 6 Gbp 0.0 150.0 20.0 82.81259377950356 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-262-TP1_R2_001 POR-262-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 40270304.0 6 Gbp 0.0 150.0 20.0 82.17386695590392 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-262-TP2_R1_001 POR-262-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47827252.0 7.1 Gbp 0.0 150.0 20.0 83.16929068197672 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-262-TP2_R2_001 POR-262-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 47827252.0 7.1 Gbp 0.0 150.0 20.0 82.93049704062902 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-262-TP4_R1_001 POR-262-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 48107247.0 7.2 Gbp 0.0 150.0 20.0 83.39760322930931 150.0 150 pass pass pass pass fail warn pass pass pass pass warn POR-262-TP4_R2_001 POR-262-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 48107247.0 7.2 Gbp 0.0 150.0 20.0 83.144122321958 150.0 150 pass pass pass pass fail warn pass pass pass pass warn POR-69-TP1_R1_001 POR-69-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28379880.0 4.2 Gbp 0.0 150.0 20.0 81.37015499806823 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-69-TP1_R2_001 POR-69-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28379880.0 4.2 Gbp 0.0 150.0 20.0 80.69885715534511 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-69-TP2_R1_001 POR-69-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31214701.0 4.6 Gbp 0.0 150.0 20.0 81.75006243440221 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-69-TP2_R2_001 POR-69-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31214701.0 4.6 Gbp 0.0 150.0 20.0 81.39221984309633 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-69-TP3_R1_001 POR-69-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45856919.0 6.8 Gbp 0.0 150.0 20.0 81.52017535859683 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-69-TP3_R2_001 POR-69-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45856919.0 6.8 Gbp 0.0 150.0 20.0 80.92886607102163 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-69-TP4_R1_001 POR-69-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36560944.0 5.4 Gbp 0.0 150.0 20.0 79.0273878408324 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-69-TP4_R2_001 POR-69-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36560944.0 5.4 Gbp 0.0 150.0 20.0 78.60693876128141 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-72-TP1_R1_001 POR-72-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36205161.0 5.4 Gbp 0.0 150.0 20.0 82.68743752550823 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-72-TP1_R2_001 POR-72-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36205161.0 5.4 Gbp 0.0 150.0 20.0 82.12113480992359 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-72-TP2_R1_001 POR-72-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37225724.0 5.5 Gbp 0.0 150.0 20.0 82.15283529080224 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-72-TP2_R2_001 POR-72-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 37225724.0 5.5 Gbp 0.0 150.0 20.0 82.17189062714897 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-72-TP3_R1_001 POR-72-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34107863.0 5.1 Gbp 0.0 150.0 20.0 82.90652989888399 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-72-TP3_R2_001 POR-72-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34107863.0 5.1 Gbp 0.0 150.0 20.0 82.38728841801756 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-72-TP4_R1_001 POR-72-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41246458.0 6.1 Gbp 0.0 150.0 20.0 79.33212593342141 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-72-TP4_R2_001 POR-72-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 41246458.0 6.1 Gbp 0.0 150.0 20.0 79.30170129104943 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-73-TP1_R1_001 POR-73-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43495512.0 6.5 Gbp 0.0 150.0 20.0 81.62311290110952 150.0 150 pass pass pass pass fail pass pass pass pass pass pass POR-73-TP1_R2_001 POR-73-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 43495512.0 6.5 Gbp 0.0 150.0 20.0 81.5483807884526 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-73-TP2_R1_001 POR-73-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 50085441.0 7.5 Gbp 0.0 150.0 19.0 84.89639640713598 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-73-TP2_R2_001 POR-73-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 50085441.0 7.5 Gbp 0.0 150.0 19.0 84.62726697553023 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-73-TP3_R1_001 POR-73-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36992346.0 5.5 Gbp 0.0 150.0 20.0 82.91823479360815 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-73-TP3_R2_001 POR-73-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36992346.0 5.5 Gbp 0.0 150.0 20.0 82.38741460930426 150.0 150 pass pass fail pass fail warn pass pass pass pass warn POR-74-TP1_R1_001 POR-74-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32701874.0 4.9 Gbp 0.0 150.0 20.0 80.98331448012244 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-74-TP1_R2_001 POR-74-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32701874.0 4.9 Gbp 0.0 150.0 20.0 80.82813515977968 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-74-TP2_R1_001 POR-74-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45106407.0 6.7 Gbp 0.0 150.0 20.0 83.1625576498337 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-74-TP2_R2_001 POR-74-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 45106407.0 6.7 Gbp 0.0 150.0 20.0 82.5433406959897 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-74-TP3_R1_001 POR-74-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31976313.0 4.7 Gbp 0.0 150.0 20.0 83.48859662304162 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-74-TP3_R2_001 POR-74-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31976313.0 4.7 Gbp 0.0 150.0 20.0 83.29906058061134 150.0 150 pass pass pass pass fail fail pass pass pass warn warn POR-74-TP4_R1_001 POR-74-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36739639.0 5.5 Gbp 0.0 150.0 20.0 80.24498372034247 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-74-TP4_R2_001 POR-74-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36739639.0 5.5 Gbp 0.0 150.0 20.0 79.59777481339326 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-83-TP1_R1_001 POR-83-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30919977.0 4.6 Gbp 0.0 150.0 20.0 84.93620619037392 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-83-TP1_R2_001 POR-83-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30919977.0 4.6 Gbp 0.0 150.0 20.0 84.27458614929044 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-83-TP2_R1_001 POR-83-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42664432.0 6.3 Gbp 0.0 150.0 20.0 79.41433443044367 150.0 150 pass pass pass pass fail warn pass pass pass pass pass POR-83-TP2_R2_001 POR-83-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 42664432.0 6.3 Gbp 0.0 150.0 20.0 79.51375629873684 150.0 150 pass pass pass pass fail warn pass pass pass warn warn POR-83-TP3_R1_001 POR-83-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30593991.0 4.5 Gbp 0.0 150.0 20.0 83.03946511428025 150.0 150 pass pass fail pass fail warn pass pass pass pass pass POR-83-TP3_R2_001 POR-83-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30593991.0 4.5 Gbp 0.0 150.0 20.0 82.48356310509637 150.0 150 pass pass fail pass fail warn pass pass pass warn warn POR-83-TP4_R1_001 POR-83-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36135314.0 5.4 Gbp 0.0 150.0 20.0 82.49491205840228 150.0 150 pass pass fail pass fail pass pass pass pass pass pass POR-83-TP4_R2_001 POR-83-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36135314.0 5.4 Gbp 0.0 150.0 20.0 81.93941147933803 150.0 150 pass pass fail pass fail warn pass pass pass warn warn