Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_356.ps
Locus Name: Cluster_356
AUAUGCAGUGAAUUAAGACACUAAACCAGACUAGGCUUCAGCAUAUUUAUUUUGUCAAGUCUAGGCUGGUUAGUUUUCUCACUUCACACUUCAAU
.......(((((...(((.(((((.((((.((((((((..(((.........))).)))))))).)))))))))..)))...)))))........ (-26.60)
AUAUGCAGUGAAgUAAGACA........................................................................... len:20 al:1
.UAUGCAGUGAAgUAAGACA........................................................................... len:19 al:1
....................CUAAACCAGACUAGGCUaC........................................................ len:19 al:3
....................CUAAACCAGACUAGGCUUCAu...................................................... len:21 al:3
....................CUAAgCCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCaU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAaC..................................................... len:22 al:22
....................CUAAACCAGACUAGGCUUCAGCAUu.................................................. len:25 al:3
....................CUAAACCAGACUAGGCUUCAGCAUAUa................................................ len:27 al:1
....................CUAAACCAGACUAGGCUUCAGCAU................................................... len:24 al:16
....................CUAAACCAGACUAGGCUUCAGg..................................................... len:22 al:2
....................CUAAACCAGACcAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCuU................................................... len:24 al:3
....................CUAAACCAGACUAGGCUUCA....................................................... len:20 al:18
....................CUAAACCAGACUAGGCUUCAGCAg................................................... len:24 al:3
....................CUAAACCAGACUAGGCUUCAG...................................................... len:21 al:14
....................CUAAACCAGACUAuGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGuA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:241
....................CUAAACCAGACUAGGCUUCAuC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAUuU................................................. len:26 al:1
....................CUAAACCAGgCUAGGCUUCAGC..................................................... len:22 al:2
....................CUgAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUgAACCAGACUAGGCUUCAGCA.................................................... len:23 al:4
....................CUAAACCAGACUAGGCUU......................................................... len:18 al:2
....................CUAAACCAGACUAGGCUUCAGCAc................................................... len:24 al:1
....................CUAAACCAGACUAGGCUa......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUu........................................................ len:19 al:4
....................CUAgACCAGACUAGGCUUCAGC..................................................... len:22 al:3
....................CUAAACCAGACUgGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCcGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGgAU................................................... len:24 al:1
....................uUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUuGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUcC........................................................ len:19 al:1
....................CUAAACCAGACUAGGCUUa........................................................ len:19 al:5
....................CUAAACCAGACUAGGCUUCAGCu.................................................... len:23 al:91
....................CUAAACCAGACUAGGCUUCAGa..................................................... len:22 al:62
....................CUAAACCgGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUcCAGCA.................................................... len:23 al:1
....................CUAAACCcGACUAGGCUUCAGC..................................................... len:22 al:2
....................uUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:2
....................CUAAACCAGACUAGGCUUCAGCc.................................................... len:23 al:34
....................CUAAACCAGACUAGGuUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCu....................................................... len:20 al:5
....................CUAAACCAGuCUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCcUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGu..................................................... len:22 al:96
....................aUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGgCUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAcCA.................................................... len:23 al:1
....................CcAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAa................................................... len:24 al:7
....................CUAAACCAGACUAGGCUUCAcC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCcU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUcCAGC..................................................... len:22 al:4
....................CUAAACCgGACUAGGCUUCAGCA.................................................... len:23 al:3
....................CUAAACCAGACUAGGCUUC........................................................ len:19 al:94
....................CUAAACCAGAuUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGCg.................................................... len:23 al:24
....................CUAAACCAGACUAGGCUcCA....................................................... len:20 al:1
....................CUAAACCAGACUAGGCUUCAGCAUA.................................................. len:25 al:2
....................CUgAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAGCAaAU................................................. len:26 al:1
....................CUAAACCAGACUAGGCUUCgGCA.................................................... len:23 al:2
....................CcAAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUAAACCAGACUAGGCUUCAGaA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:557
....................CUAAACCAGACUAGGCUUCAa...................................................... len:21 al:2
....................CUAAgCCAGACUAGGCUUCAGCA.................................................... len:23 al:1
.....................UAAACCAGACUgGGCUUCAGC..................................................... len:21 al:2
.....................UAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:51
.....................UAAACCAGACUAGGCUcC........................................................ len:18 al:1
.....................UAAACCAGACUAGGCUUCAGu..................................................... len:21 al:14
.....................UAAACCAGACUAGGCUUCAGCu.................................................... len:22 al:16
.....................UAAACCAGACUAGGCUUCAGCAc................................................... len:23 al:12
.....................UAAACCAGACUAGGCUUCAGaA.................................................... len:22 al:2
.....................UAAACCAGACUAGGCUUCAGCc.................................................... len:22 al:4
.....................UAAACCAGACUAGGCUUCAGCA.................................................... len:22 al:20
.....................UAAACCAGACUAGGCUUCAGCAUu.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGC..................................................... len:21 al:93
.....................UAAACCAGACUAGGCUaC........................................................ len:18 al:2
.....................UAAACCAGACUAGGCUUCAGCAUc.................................................. len:24 al:1
.....................UAAACCAGACUAGGCUUCAGa..................................................... len:21 al:13
.....................UAAACCAGACUAGGCUUCAGCg.................................................... len:22 al:6
.....................UAgACCAGACUAGGCUUCAGCAU................................................... len:23 al:2
.....................UAAACCAGACUAGGCUUCAGCgU................................................... len:23 al:3
.....................aAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:1
.....................UAAACCAGACUAGGCUUCAaC..................................................... len:21 al:4
.....................UAAACCAGACUAGGCUUC........................................................ len:18 al:18
.....................UAAACCAGACUAGGCUUCAG...................................................... len:20 al:6
.....................UAAACCAGACUAGGCUUCAGCAg................................................... len:23 al:4
.....................UAAACCAGACUAGGCUUCAGCAUA.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGCAa................................................... len:23 al:6
.....................UAAACCuGACUAGGCUUC........................................................ len:18 al:1
......................AAACCAGACUAGGCUUCAGa..................................................... len:20 al:1
......................AAACCAGACUAGGCUUCAGCAc................................................... len:22 al:1
......................cAACCAGACUAGGCUUCAGC..................................................... len:20 al:2
......................AAACCAGACUAGGCUUCAGC..................................................... len:20 al:3
......................AAACCAGACUAGGCUUCAGCA.................................................... len:21 al:1
........................ACCAGACUAGGCUUCAGCA.................................................... len:19 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUU.................... len:30 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUc.................... len:30 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUUU................... len:31 al:5
...............................................UAUUUUGUCAAGUCUAGGCUGGUUAGUUc................... len:29 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUc................... len:24 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUc.................... len:23 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUgU................... len:24 al:2
....................................................UGcCAAGUCUAGGCUGGUUAGUUU................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUU................... len:24 al:27
....................................................UGUCAAGUCUAGGCUGGUUAGUU.................... len:23 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUUa................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUg................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGU..................... len:22 al:1
.....................................................GUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:1
.....................................................cUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:17
.....................................................GUCAAGUCUAGGCUGGUU........................ len:18 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUc.................. len:23 al:64
......................................................UCAAGUCUgGGCUGGUUAGU..................... len:20 al:2
......................................................aCAAGUCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGuCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUaUAGGCUGGUUAGUUU................... len:22 al:39
......................................................UCAAGcCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUcGUUAGUUU................... len:22 al:16
......................................................UCAAGUCUAGGCUGGUUAGaUU................... len:22 al:106
......................................................UCAAGUCUAGGCUGGUUAG...................... len:19 al:15
......................................................UCAAGUCUAGGCUGGUcAGUU.................... len:21 al:26
......................................................aCAAGUCUAGGCUGGUUAGUU.................... len:21 al:78
......................................................UCAAGUCaAGGCUGGUUAGUUU................... len:22 al:67
......................................................UCuAGUCUAGGCUGGUUAGUUU................... len:22 al:226
......................................................UCAAGUCUAGGCUGaUUAGUU.................... len:21 al:5
......................................................cCAAGUCUAGGCUGGUUAGU..................... len:20 al:5
......................................................UCAAaUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGcUUAGUUU................... len:22 al:8
......................................................UCAgGUCUAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUUAGaU.................... len:21 al:41
......................................................UCAAGUCUAGGCUGGUgAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGuUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGuCUGGUUAGUUU................... len:22 al:29
......................................................UCAAGUCUAGGCUGGUUAGcUU................... len:22 al:2649
......................................................UaAAGUCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGgUGGUUAGUUU................... len:22 al:16
......................................................UCAAGUCUAGGCaGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAGUgUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGc......................... len:16 al:2
......................................................gCAAGUCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUg................... len:22 al:8346
......................................................UCAAGUCUAGGCUGGgUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUUAGc..................... len:20 al:91
......................................................UCAAGUCUAGGCUGGUUAGUgU................... len:22 al:8010
......................................................UCAAGUCUAGGCUuGUUAGUU.................... len:21 al:1
......................................................UCAAGUCaAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUUAaUU.................... len:21 al:2
......................................................UCAAGUCUgGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUuGGCUGGUUAGUUU................... len:22 al:90
......................................................UCAAGUCUAGGCUGGUUAGUUUg.................. len:23 al:16
......................................................UCAgGUCUAGGCUGGUUAGUU.................... len:21 al:61
......................................................UCAAGUgUAGGCUGGUUAGUUU................... len:22 al:3
......................................................UCAAGUCUAGGCUGGUcAGUUU................... len:22 al:534
......................................................UCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:532
......................................................UCAcGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGaCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCcGGUUAGUU.................... len:21 al:32
......................................................UCAAGUCUAGGCUGaUUAG...................... len:19 al:1
......................................................UCAAGUCUAGGCUaGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGaUAGUUU................... len:22 al:71
......................................................UCuAGUCUAGGCUGGUUAGUU.................... len:21 al:9
......................................................UCAAGUCUAGGCUGGcUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGuUUAGUUUU.................. len:23 al:1
......................................................aCAAGUCUAGGCUGGUUAGUUU................... len:22 al:2253
......................................................UCAAGUCUAGGCgGGUUAGUUU................... len:22 al:93
......................................................UCAAGUCUAGGCUGGUUAGU..................... len:20 al:442
......................................................UCAAGUCUAGGCaGGUUAGUU.................... len:21 al:6
......................................................UCAAGUCUAGGCaGGUUAGUUU................... len:22 al:158
......................................................UCAAGUCUAGGCUGGUUAGUUUUaU................ len:25 al:2
......................................................UCAAGUCUAaGCUGGUUAGUU.................... len:21 al:9
......................................................UCAAGUCUAGGCUGGUUAGUaU................... len:22 al:4645
......................................................UCAAGUCUuGGCUGGUUAGUU.................... len:21 al:6
......................................................UCAAGUCUAGGCUGGUUAGgUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUUu................. len:24 al:14
......................................................UCAAGUCUAGGCUGGUUAGUc.................... len:21 al:3024
......................................................UCAAGUCUAGGCUGGUUcGUUU................... len:22 al:28
......................................................cCAAGUCUAGGCUGGUUAGUU.................... len:21 al:174
......................................................UCAAGUCcAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUUA....................... len:18 al:11
......................................................UCAAGUCUAGGaUGGUUAGUU.................... len:21 al:2
......................................................UCcAGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGGCUGGUgAGUUU................... len:22 al:26
......................................................UCAAGUCUAuGCUGGUUAGUUU................... len:22 al:65
......................................................UCAAGUCUAGGCUGGUUAGgUU................... len:22 al:280
......................................................UCAAGUCUAGGCUGGUc........................ len:17 al:4
......................................................UCAAGUCUAGGCUGGaUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUaAGUU.................... len:21 al:1
......................................................UCAAGcCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGcCUAGGCUGGUUAGUU.................... len:21 al:42
......................................................UCAAGUaUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UuAAGUCUAGGCUGGUUAGUUU................... len:22 al:473
......................................................UCAAGUCUAGGCUGGUUAGa..................... len:20 al:10
......................................................gCAAGUCUAGGCUGGUUAGUUU................... len:22 al:131
......................................................UCAAGUCUAGGCUaGUUAGUU.................... len:21 al:13
......................................................aCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:4
......................................................UCAuGUCUAGGCUGGUUAGUUU................... len:22 al:86
......................................................UCAAGUCUAGGCUGGUUAGUcUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGcU........................ len:17 al:1
......................................................UCAgGUCUAGGCUGGUUAG...................... len:19 al:1
......................................................UCAAuUCUAGGCUGGUUAGUUU................... len:22 al:29
......................................................UCAAGUCcAGGCUGGUUAGUU.................... len:21 al:29
......................................................UCAAGUCUAGGCUGGUUAGg..................... len:20 al:20
......................................................UCAAGaCUAGGCUGGUUAGUUU................... len:22 al:76
......................................................UCAAGUCUAGGCUGGUUAGUUcU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUU.................... len:21 al:13428
......................................................UCAAGUCUAaGCUGGUUAGUUU................... len:22 al:203
......................................................UCAAGgCUAGGCUGGUUAGUUU................... len:22 al:38
......................................................UCAAGUCUAGGCUGGUg........................ len:17 al:1
......................................................UuAAGUCUAGGCUGGUUAGUU.................... len:21 al:15
......................................................UCAAGUCUAGGCUGuUUAGUUU................... len:22 al:80
......................................................UCAAGUCUAGGCgGGUUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUUAGUg.................... len:21 al:366
......................................................UCAAGUCUAGGCUGGUUAGUa.................... len:21 al:1051
......................................................UCAAGUCUgGGCUGGUUAGUUU................... len:22 al:1119
......................................................UCAAGUCUAGGCUGGUUAuUUU................... len:22 al:35
......................................................aCAAGUCUAGGCUGGUUA....................... len:18 al:1
......................................................UCAAGUCUgGGCUGGUUAGUU.................... len:21 al:36
......................................................UCgAGUCUAGGCUGGUUAGUU.................... len:21 al:50
......................................................UCAAGUCUAGGCUGGUaAGUUU................... len:22 al:36
......................................................UCAgGUCUAGGCUGGUU........................ len:17 al:1
......................................................aCAAGUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAuGUCUAGGCUGGUUAGUU.................... len:21 al:3
......................................................UCAAGcCUAGGCUGGUUAGUUU................... len:22 al:1206
......................................................UCAAGUCUAGGCUGGgUAGUUU................... len:22 al:76
......................................................UCAAGUCUAGGCcGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUUUa................. len:24 al:25
......................................................UCAgGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAcUUU................... len:22 al:22
......................................................UCAAGUCUAcGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAcGCUGGUUAGUUU................... len:22 al:1
......................................................UCAAGUCUAGaCUGGUUAGUU.................... len:21 al:10
......................................................UCAAGUCUAGGCUGG.......................... len:15 al:1
......................................................UCAgGUCUAGGCUGGUUAGUUU................... len:22 al:1295
......................................................UCAAGUCUAGGCUGGUgAGUUUUC................. len:24 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUgU.................. len:23 al:11
......................................................UCAAGUCUAGGCUGGUUAGUUUa.................. len:23 al:1066
......................................................UCAAGUCUAGGCcGGUUAGUUU................... len:22 al:873
......................................................UCcAGUCUAGGCUGGUUAGUUU................... len:22 al:91
......................................................UCAAGUCUAGGCUGGUUAGUUa................... len:22 al:23486
......................................................cCAAGUCUAGGCUGGUUAGUUU................... len:22 al:5213
......................................................UCAAGUCUAGGCUGGUUgGUU.................... len:21 al:35
......................................................UCAAaUCUAGGCUGGUUAGUU.................... len:21 al:10
......................................................UCAAGUCUAuGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCgGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAc...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUUgGUUU................... len:22 al:815
......................................................UCAAGUuUAGGCUGGUUAGUUU................... len:22 al:99
......................................................UCAAGUCUAGGCUGGUUAu...................... len:19 al:1
......................................................UCAcGUCUAGGCUGGUUAGUUU................... len:22 al:30
......................................................UaAAGUCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUgGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUaGUUAG...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUUAGcU.................... len:21 al:117
......................................................UCAAGUCUAGGCUGGUUAGUUUaC................. len:24 al:21
......................................................UCAAGUCUAGGCUGGUUuGUU.................... len:21 al:3
......................................................UCuAGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGaUGGUUAGUUU................... len:22 al:33
......................................................UCAAGUCUAGGCaGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUc................... len:22 al:65966
......................................................UgAAGUCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUUAGUcU................... len:22 al:1814
......................................................UCAAGUCUAGGCUGaUUAGUUU................... len:22 al:165
......................................................UCAAGUCUAGGCUaGUUAGUUU................... len:22 al:344
......................................................UCAAGUCUAGGCUGGUUAGcUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUuGUUAGUUU................... len:22 al:50
......................................................cCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:8
......................................................UCAAGUCUuGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGcUAGUUU................... len:22 al:915
......................................................UCAAGcCUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUg....................... len:18 al:2
......................................................UCAAGUCUcGGCUGGUUAGUU.................... len:21 al:2
......................................................UuAAGUCUAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUUAuUU.................... len:21 al:1
......................................................UCAAGUCUAGaCUGGUUAGUUU................... len:22 al:297
......................................................UCgAGUCUAGGCUGGUUAGUUU................... len:22 al:1361
......................................................UCAAGUCUAGGCUGGUUuGU..................... len:20 al:11
......................................................UCAAGUCUAGGCUGGUUAaU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUgGU..................... len:20 al:3
......................................................UCAAGUCUAGGCUGGUUAcUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUU........................ len:17 al:46
......................................................UCAAGUCUAGGCUGGUUAGgU.................... len:21 al:405
......................................................UCAAGUCUAGaCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGuUGGUUAGUUU................... len:22 al:280
......................................................UCAAaUCUAGGCUGGUUAGUUU................... len:22 al:136
......................................................UCgAGUCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCgAGGCUGGUUAGUUU................... len:22 al:41
......................................................UCAAGUCUAGGCUGGUUAaUUU................... len:22 al:99
......................................................UCAAGUCUAGGCUGGUUAa...................... len:19 al:8
......................................................UaAAGUCUAGGCUGGUUAGUUU................... len:22 al:105
......................................................UCAAGUCUcGGCUGGUUAGUUU................... len:22 al:44
......................................................UCAAGUCUAGGCUGGUUAGUUaU.................. len:23 al:16
......................................................UCAAGUCUAGGCUGGUUuGUUU................... len:22 al:49
......................................................UCAAcUCUAGGCUGGUUAGUUU................... len:22 al:6
......................................................UCAAGgCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................cCAAGUCUAGGCUGGUU........................ len:17 al:3
......................................................UCAAGUCUAGGCUGGUUAGUUU................... len:22 al:361684
......................................................UCAAuUCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCcAGGCUGGUUAGUUU................... len:22 al:727
......................................................UCAAGUCUAGGCUGGcUAGUU.................... len:21 al:29
......................................................UgAAGUCUAGGCUGGUUAGUUU................... len:22 al:89
......................................................UCAAGUCUAGcCUGGUUAGUUU................... len:22 al:11
......................................................UCAAGUuUAGGCUGGUUAGUU.................... len:21 al:5
.......................................................CAAGUCUAGGCUGGcUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUa.................... len:20 al:1
.......................................................CAAGUCUAGGCUGGUU........................ len:16 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUUaC................. len:23 al:1
.......................................................CAgGUCUAGGCUGGUUAGUUU................... len:21 al:4
.......................................................CAAGUCUAGGCUGGUUAGUU.................... len:20 al:22
.......................................................CAAGUCUAGGCUGGUUAGgUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUg.................... len:20 al:1
.......................................................CAAGUCUAGGCUGaUUAGUUU................... len:21 al:1
.......................................................uAAGUCUAGGCUGGUUAGUUU................... len:21 al:13
.......................................................CAAGUCUAGGCUGGUUAGUUg................... len:21 al:14
.......................................................CAAGUCUAGGCUGGUUAGcUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGUUgGUUU................... len:21 al:1
.......................................................CAAGUCUAGGuUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUaU................... len:21 al:15
.......................................................CAAGUCUAGGCUGGUUAGUUUa.................. len:22 al:1
.......................................................CAAGUCUAGGCUGGUUcGUUU................... len:21 al:2
.......................................................CAcGUCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUUc................... len:21 al:113
.......................................................CAAGUCUAGGCUGGUUAGUcU................... len:21 al:4
.......................................................CAAGcCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGU..................... len:19 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUUUu................. len:23 al:1
.......................................................CAAGUCUAGGCUGGUUAGUgU................... len:21 al:11
.......................................................CAAGUCUAGGCUaGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGgU.................... len:20 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUU................... len:21 al:645
.......................................................CgAGUCUAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGUUAGUc.................... len:20 al:2
.......................................................CAAGUCUAaGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUa................... len:21 al:55
.......................................................CAAGUCcAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCgAGGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCcGGUUAGUUU................... len:21 al:2
........................................................AAGUCUAGGCUGGUUAGUU.................... len:19 al:10
........................................................AAGUCUAGGCUGGUUAGcUU................... len:20 al:2
........................................................cAGUCUAGGCUGGUUAGUUU................... len:20 al:5
........................................................uAGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUc................... len:20 al:50
........................................................AAGUCUAGGCUGGUUAGUcU................... len:20 al:4
........................................................AAGUCUAGGCUGGUUAGUa.................... len:19 al:2
........................................................AAGUCUAGGCUGGUUAGUaU................... len:20 al:4
........................................................AAGUCUAGGCUGGcUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUaGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGuUUAGUUU................... len:20 al:1
........................................................AAGUCUgGGCUGGUUAGUUU................... len:20 al:3
........................................................AAGcCUAGGCUGGUUAGUUU................... len:20 al:3
........................................................AuGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUg................... len:20 al:6
........................................................AAGUCUAGGCUGGUUgGUUU................... len:20 al:2
........................................................AAGUCUAGGCUGGUUAGUUU................... len:20 al:222
........................................................AAGUCUAGGCUGGUUAGUgU................... len:20 al:7
........................................................AAGUCUAGGCUGGUUAGUc.................... len:19 al:3
........................................................AAGUCUAGGCUGGUUAGUUaU.................. len:21 al:1
........................................................AAGUCUAGGCUGGUUAGUUUa.................. len:21 al:1
........................................................AAGUCUAGGCUGGaUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUa................... len:20 al:12
........................................................AAGUCcAGGCUGGUUAGUUU................... len:20 al:1
.........................................................AGUCUAGGCUGGUUAGUU.................... len:18 al:4
.........................................................AGUCUAGGCUGGUUAGUa.................... len:18 al:1
.........................................................AGUCUAGGCUGGUUAGUUc................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUUa................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUUU................... len:19 al:29
.........................................................AGUCUAGGCUGGUUAGUUg................... len:19 al:1
.........................................................AGUCUAGGCUGGUUAGUaU................... len:19 al:1
..........................................................GUCUAGGCUGGUUAGUUU................... len:18 al:2
..........................................................GUCUAGGCUGGUUAGUUa................... len:18 al:1