Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_3397.ps
Locus Name: Cluster_3397
UAUGCAGUAAGUUUUGUGUUUUUACUUCAAUGUUAUCGGUUUGUUUAAAACGAACCGAUAACAUUGAAGUUAAAACACAAAACUUGUAAACAA
.......(((((((((((((((.((((((((((((((((((((((...)))))))))))))))))))))).)))))))))))))))....... (-49.00)
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....................UUUACUUCAAcGUUAUCGGUUUGU................................................. len:24 al:2
....................UUUACUUCAAUGUUAUCGGUUU................................................... len:22 al:5
....................UUUACUUCAAUGUUAUCGGUUUGU................................................. len:24 al:60
....................UUUACUUCAAUGUUAUCGGUgUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUUc................................................... len:22 al:1
....................UUUACUUCAAUGUUAUCGaUUUGU................................................. len:24 al:11
....................UUUACUUCAAUGUgAUCGGUUUGU................................................. len:24 al:2
....................UUUACUUCAAUGUUAUCGGUUUGUU................................................ len:25 al:2
....................UUUACUUCAAUGUUAUCGGUUUGc................................................. len:24 al:15
....................UUUACUUCAAUGUUAUCGGUUUGg................................................. len:24 al:2
....................UUUACUUCAAUGUUAUCGGUUUGa................................................. len:24 al:2
....................cUUACUUCAAUGUUAUCGGUUUGU................................................. len:24 al:2
....................UUUACUUCAAUGUUAcCGGUUUGU................................................. len:24 al:1
....................UUUACUUCAAUGUUAUCGGUUa................................................... len:22 al:1
.....................UUACaUCAAUGUUAUCGGUUUGUU................................................ len:24 al:1
.....................UUACUUCAAUGUaAUCGGUUUGU................................................. len:23 al:2
.....................cUACUUCAAUGUUAUCGGUUUG.................................................. len:22 al:1
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.....................UUACUUCAAUGUUAUCaGUUUGU................................................. len:23 al:11
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.....................UUACUUCAgUGUUAUCGGUUUGUU................................................ len:24 al:3
.....................UUACUUCAAUGUUAUCGGUUcGU................................................. len:23 al:3
.....................UUACUUCAAUGUcAUCGGUUUGU................................................. len:23 al:11
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.....................UUACUUCAAUGUUAUCGGg..................................................... len:19 al:2
.....................UUACcUCAAUGUUAUCGGUUUGU................................................. len:23 al:25
.....................UUACUUCAAUGUUAUCGGUUcGUU................................................ len:24 al:1
.....................UUACUUCAAUGUUAUCGGUUUGUUUA.............................................. len:26 al:5
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.....................UUACUUCAAUGUUAUCGGUUUGUc................................................ len:24 al:175
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.....................UUACaUCAAUGUUAUCGGUUUGU................................................. len:23 al:3
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.....................UUACUUCAAUGUUAUCGGUUUGUaU............................................... len:25 al:2
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.....................UUACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:6806
.....................UUACUUCAAUGUUAUCGGUUUGUUUu.............................................. len:26 al:1
.....................UUgCUUCAAUGUUAUCGGUUUGU................................................. len:23 al:21
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.....................UUACUUCAAUGUUAUCGGUaUGU................................................. len:23 al:1
.....................UUACUUCAAUGUUAUCGGc..................................................... len:19 al:4
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.....................UUACUUCAAUGcUAUCGGUUUGU................................................. len:23 al:19
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.....................UUACUUCAAUGUUAUCGGcUUGU................................................. len:23 al:21
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.....................UUACcUCAAUGUUAUCGGUUUGUU................................................ len:24 al:3
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.....................UUACUUCAAUGUUAUCGGUUa................................................... len:21 al:7
.....................UUACUUCAAUGUUAUCGcUUUGU................................................. len:23 al:1
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.....................UUACUcCAAUGUUAUCGGUUUGU................................................. len:23 al:19
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.....................UUACUUCgAUGUUAUCGGUUUGUU................................................ len:24 al:5
.....................UUACUUCAAUGUUAUCGGUUU................................................... len:21 al:20
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.....................UUACUUCAAUaUUAUCGGUUUGU................................................. len:23 al:2
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.....................UUACUUCAAUGUUAUCGGUUUGg................................................. len:23 al:598
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.....................UaACUUCAAUGUUAUCGGUUUGU................................................. len:23 al:11
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.....................UUACUUCAAUGUUAUCGGUUUa.................................................. len:22 al:8
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.....................UUACUUCAAcGUUAUCGGUUUGU................................................. len:23 al:11
.....................UUACUUCAAUGUUAUCGGUUUc.................................................. len:22 al:1
.....................UUACUUCAAUGUUAUCGaUUUGU................................................. len:23 al:1046
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.....................UUACUUCAAUGUUgUCGGUUUGUU................................................ len:24 al:4
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......................UACUUCAAUGUUAUCGGUUUGaU................................................ len:23 al:3
......................UACUUCAAUGUUAUCGGaUUGU................................................. len:22 al:3
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......................UACUUCAAUGUUAUCGGUaUGUU................................................ len:23 al:1
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......................UACUUCAAUGUUAUCGGUUUcU................................................. len:22 al:4
......................UACUUCAAUGUUAUCGGUUUu.................................................. len:21 al:2
......................UACUUCAAUGUUAUCGGgUUGU................................................. len:22 al:3
......................UACUUCAAUGUUAUCGGUaU................................................... len:20 al:2
......................UACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:7987
......................UgCUUCAAUGUUAUCGGUUU................................................... len:20 al:1
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......................aACUUCAAUGUUAUCGGUUUGUU................................................ len:23 al:9
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......................UACUUCAgUGUUAUCGGUUUGUU................................................ len:23 al:3
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......................UACUUCAAUGUUAUCGGUUUG.................................................. len:21 al:56
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......................UACUUCAAUGUUAUCGGUUUGg................................................. len:22 al:610
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......................UACUUCAAUGUUAUCGGUa.................................................... len:19 al:1
......................UACUUCAAUGUUAUCGGUUUa.................................................. len:21 al:8
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......................UACcUCAAUGUUAUCGGUUUGU................................................. len:22 al:34
......................cACUUCAAUGUUAUCGGUUUGU................................................. len:22 al:99
......................UACUUCAAUGUUAUCGGUUaGU................................................. len:22 al:3
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......................cACUUCAAUGUUAUCGGUU.................................................... len:19 al:1
.......................ACUUCAAUGUUAUCGGUUUGUU................................................ len:22 al:1
.......................ACUUCAAUGUUAUCGGUUUGc................................................. len:21 al:1
.......................ACUUCAAUGUUAUCGGUUUaU................................................. len:21 al:1
.......................ACUUCAAUGUUAUCGGUUUGa................................................. len:21 al:3
.......................ACUUCAAUGUUAUCGGUUUGUc................................................ len:22 al:2
.......................ACUUCAAUGUUAUCGGUUUGU................................................. len:21 al:6
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.........................UUCAAUGUUAUCGGUUUGUUa............................................... len:21 al:1
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.........................UUCAAUGUUAUCGGUUUGUg................................................ len:20 al:1
.........................UUCAAUGUUAUCGGUUUG.................................................. len:18 al:1
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.........................UUCAAUGUUAUCGGUUUGUaU............................................... len:21 al:2
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..........................UCAAUGUUAUCGGUUUGU................................................. len:18 al:3
...........................CAAUGUUAUCGGUUUGUUa............................................... len:19 al:1
............................uAUGUUAUCGGUUUGUU................................................ len:17 al:1
............................AAUGUUAUCGGUUUGUU................................................ len:17 al:1
..................................................CGAACCGAUAACAUUGAAGUUAAAACACA.............. len:29 al:1
...................................................GAACCGAUAACAUUGAAu........................ len:18 al:2
...................................................aAACCGAUAACAUUGAAGUUA..................... len:21 al:1
...................................................GAgCCGAUAACAUUGAAGUUA..................... len:21 al:1
...................................................GAACCGAUAACAUUGAAGU....................... len:19 al:3
...................................................GAACCGAUAACgUUGAAGUUAA.................... len:22 al:1
...................................................GAACCGAUAACAUUGAAGUUAAAu.................. len:24 al:1
...................................................GAACCGAUAACAUUGAAG........................ len:18 al:7
...................................................GAACCGAUAACAUUGAAGaU...................... len:20 al:1
...................................................GAACCGAUAACAUUGAAGUU...................... len:20 al:2
...................................................GAACCGAUAACAUUGAAGa....................... len:19 al:1
...................................................GAACCGAUAACAUUGAAGUUAA.................... len:22 al:2
...................................................GAACCGAUAACAUUGAAa........................ len:18 al:1
...................................................GAACCGAUAACAUUGA.......................... len:16 al:1
...................................................GAACCGAUAACAUUGAAGUUA..................... len:21 al:7
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...................................................GAACCGAUAACAUUGAAGc....................... len:19 al:2