# bases A,C # total_reads_used 100000 # count_reads_A 100000 # count_reads_C 100000 # pass_threshold_C 0.59375 # pass_threshold_A 0.7402344 base code pass_count pass_frac all_count all_frac A - 7663789 0.9469944 8207808 0.9136961 A a 428961 0.05300559 775275 0.08630389 C - 5260505 0.9280016 5633731 0.8956567 C m 233652 0.041218366 354310 0.05632859 C 21839 174481 0.030780056 302015 0.048014674