Package: topGO Type: Package Title: Enrichment Analysis for Gene Ontology Version: 2.50.0 Date: 2016-02-03 Author: Adrian Alexa, Jorg Rahnenfuhrer Maintainer: Adrian Alexa Description: topGO package provides tools for testing GO terms while accounting for the topology of the GO graph. Different test statistics and different methods for eliminating local similarities and dependencies between GO terms can be implemented and applied. License: LGPL Depends: R (>= 2.10.0), methods, BiocGenerics (>= 0.13.6), graph (>= 1.14.0), Biobase (>= 2.0.0), GO.db (>= 2.3.0), AnnotationDbi (>= 1.7.19), SparseM (>= 0.73) Imports: lattice, matrixStats, DBI Suggests: ALL, hgu95av2.db, hgu133a.db, genefilter, xtable, multtest, Rgraphviz, globaltest Collate: AllClasses.R topGOmethods.R topGOgraph.R topGOalgo.R topGOfunctions.R topGOannotations.R topGOtests.R topGOviz.R zzz.R biocViews: Microarray, Visualization git_url: https://git.bioconductor.org/packages/topGO git_branch: RELEASE_3_16 git_last_commit: befbff4 git_last_commit_date: 2022-11-01 Date/Publication: 2022-11-01 NeedsCompilation: no Packaged: 2022-11-01 23:15:12 UTC; biocbuild Built: R 4.2.3; ; 2024-03-22 20:36:58 UTC; unix