Deprecated              Deprecated functionality
EnsDb                   Connect to an EnsDb object
EnsDb-class             Basic usage of an Ensembl based annotation
                        database
Filter-classes          Filters supported by ensembldb
addFilter,EnsDb-method
                        Globally add filters to an EnsDb database
cdsToTranscript         Map positions within the CDS to coordinates
                        relative to the start of the transcript
convertFilter,AnnotationFilter,EnsDb-method
                        Convert an AnnotationFilter to a SQL WHERE
                        condition for EnsDb
exonsBy                 Retrieve annotation data from an Ensembl based
                        package
genomeToProtein         Map genomic coordinates to protein coordinates
genomeToTranscript      Map genomic coordinates to transcript
                        coordinates
getGeneRegionTrackForGviz
                        Utility functions
getGenomeFaFile         Functionality related to DNA/RNA sequences
hasProteinData,EnsDb-method
                        Determine whether protein data is available in
                        the database
lengthOf                Calculating lengths of features
listEnsDbs              List EnsDb databases in a MariaDB/MySQL server
makeEnsembldbPackage    Generating a Ensembl annotation package from
                        Ensembl
proteinToGenome         Map within-protein coordinates to genomic
                        coordinates
proteinToTranscript     Map protein-relative coordinates to positions
                        within the transcript
proteins,EnsDb-method   Protein related functionality
runEnsDbApp             Search annotations interactively
select                  Integration into the AnnotationDbi framework
seqlevelsStyle          Support for other than Ensembl seqlevel style
transcriptToCds         Map transcript-relative coordinates to
                        positions within the CDS
transcriptToGenome      Map transcript-relative coordinates to genomic
                        coordinates
transcriptToProtein     Map transcript-relative coordinates to amino
                        acid residues of the encoded protein
useMySQL,EnsDb-method   Use a MariaDB/MySQL backend