basePath | Class '"HTMLReport"' |
basePath-method | Class '"HTMLReport"' |
BaseReport-class | Class '"BaseReport"' |
baseUrl | Class '"HTMLReport"' |
baseUrl-method | Class '"HTMLReport"' |
connectionHandlers | Class '"ReportHandlers"' |
CSVFile | Function for creating and initializing a CSVFile for publishing results |
CSVFile-class | Class '"CSVFile"' |
custHeaderPanel | Define a header panel with custom JS/CSS for a Shiny app |
DataPackage | Function for creating and initializing an object of class DataPackage. |
DataPackage-class | Class '"DataPackage"' |
dependencies | Class '"DataPackage"' |
dependencies-method | Class '"DataPackage"' |
dependencies<- | Class '"DataPackage"' |
dependencies<--method | Class '"DataPackage"' |
fileHandlers | Class '"ReportHandlers"' |
filename | Methods for getting the name of a file for a CSVFile or HTMLReport. |
filename-method | Methods for getting the name of a file for a CSVFile or HTMLReport. |
filename-methods | Methods for getting the name of a file for a CSVFile or HTMLReport. |
fileWIndexHandlers | Class '"ReportHandlers"' |
finish | Finalizing reports after publishing results |
finish-method | Finalizing reports after publishing results |
finish-methods | Finalizing reports after publishing results |
HTMLReport | Class '"HTMLReportRef"' |
HTMLReport-class | Class '"HTMLReport"' |
HTMLReportRef-class | Class '"HTMLReportRef"' |
knitrHandlers | Class '"ReportHandlers"' |
Link | Create a table of Links |
Link-method | Create a table of Links |
Link-methods | Create a table of Links |
makeOldHTMLReport | Creating and initializing an HTMLReport object |
mockRnaSeqData | A counts table of mock RNA-deq data in mouse. |
modifyReportDF | Decorate the Basic data.frame Representation of an Object |
modifyReportDF-method | Decorate the Basic data.frame Representation of an Object |
modifyReportDF-methods | Decorate the Basic data.frame Representation of an Object |
name | Class '"BaseReport"' |
name-method | Class '"BaseReport"' |
name<--method | Class '"BaseReport"' |
name<--method | Class '"CSVFile"' |
name<--method | Class '"HTMLReport"' |
objectToHTML | Transform R objects into HTML form to be inserted in HTML reports |
objectToHTML-method | Transform R objects into HTML form to be inserted in HTML reports |
objectToHTML-methods | Transform R objects into HTML form to be inserted in HTML reports |
page | Class '"HTMLReport"' |
page-method | Class '"HTMLReport"' |
page<- | Class '"HTMLReport"' |
page<--method | Class '"HTMLReport"' |
path | Class '"BaseReport"' |
path-method | Class '"BaseReport"' |
path-method | Class '"DataPackage"' |
path-method | Class '"HTMLReport"' |
path-method | Class '"HTMLReportRef"' |
path-method | Class '"ReportHandlers"' |
publish | Methods for publishing a variety of data types in selected output formats |
publish-method | Class '"HTMLReportRef"' |
publish-method | Methods for publishing a variety of data types in selected output formats |
publish-methods | Methods for publishing a variety of data types in selected output formats |
readReport | Read in an Existing Report |
reportDirectory | Class '"BaseReport"' |
reportDirectory-method | Class '"BaseReport"' |
reportDirectory<- | Class '"BaseReport"' |
reportDirectory<--method | Class '"BaseReport"' |
ReportHandlers-class | Class '"ReportHandlers"' |
reporting.theme | Color theme for use in ReportingTools |
reporting.theme.alternate | Alternate color theme for use in ReportingTools |
shinyHandlers | Class '"ReportHandlers"' |
show-method | Class '"BaseReport"' |
show-method | Class '"HTMLReport"' |
show-method | Class '"HTMLReportRef"' |
title | Class '"BaseReport"' |
title-method | Class '"BaseReport"' |
title<- | Class '"BaseReport"' |
title<--method | Class '"BaseReport"' |
toReportDF | Class Specific Default Behavior for Transforming Objects to data.frames |
toReportDF-method | Class Specific Default Behavior for Transforming Objects to data.frames |
toReportDF-methods | Class Specific Default Behavior for Transforming Objects to data.frames |
url-method | Class '"HTMLReport"' |
validConnection | Determine connection validity |
[[-method | Class '"HTMLReportRef"' |
[[<--method | Class '"HTMLReportRef"' |