Tools for manipulating GO and microarrays.
Distance matrices for the BCR/ABL and NEG subgroups.
A function to compute a correlation based graph from Gene Expression Data
A function to compute the distance between pairs of nodes in a graph.
Hypergeometric Tests for GO term association
Find genes that are not connected to the others.
Construct the GO graph given a set of leaves.
Summarize Probe Sets Associated with a hyperGTest Result
Functions to compute similarities between GO graphs and also between Entrez Gene IDs based on their induced GO graphs.
Extraction and Plotting of GO Terms from a GOHyperGResult Object