Class "GOHyperGResult"
Defunct Functions in GOstats Package
Tools for manipulating GO and microarrays.
Distance matrices for the BCR/ABL and NEG subgroups.
Class "OBOHyperGResult"
A function to compute a correlation based graph from Gene Expression Data
A function to compute the distance between pairs of nodes in a graph.
Hypergeometric Tests for GO term association
Index to Dimnames
Construct a GO Graph
Find genes that are not connected to the others.
Construct the GO graph given a set of leaves.
Summarize Probe Sets Associated with a hyperGTest Result
Shortest Path Analysis
Functions to compute similarities between GO graphs and also between Entrez Gene IDs based on their induced GO graphs.
Extraction and Plotting of GO Terms from a GOHyperGResult Object
Triad Functions