# go_term

go_id: GO:0016103
term: diterpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of diterpenoid compounds, terpenoids with four isoprene units.


go_id: GO:0016104
term: triterpenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of triterpenoid compounds, terpenoids with six isoprene units.


go_id: GO:0016105
term: triterpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of triterpenoid compounds, terpenoids with six isoprene units.


go_id: GO:0016106
term: sesquiterpenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.


go_id: GO:0016107
term: sesquiterpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of sesquiterpenoid compounds, terpenoids with three isoprene units.


go_id: GO:0016108
term: tetraterpenoid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.


go_id: GO:0016109
term: tetraterpenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.


go_id: GO:0016110
term: tetraterpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tetraterpenoid compounds, terpenoids with eight isoprene units.


go_id: GO:0016111
term: polyterpenoid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.


go_id: GO:0016112
term: polyterpenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of polyterpenoid compounds, terpenoids with more than eight isoprene units.


go_id: GO:0016113
term: polyterpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of polyterpenoid compounds, terpenoids with more than eight isoprene units.


go_id: GO:0016114
term: terpenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.


go_id: GO:0016115
term: terpenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.


go_id: GO:0016116
term: carotenoid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.


go_id: GO:0016117
term: carotenoid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.


go_id: GO:0016118
term: carotenoid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.


go_id: GO:0016120
term: carotene biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of carotenes, hydrocarbon carotenoids.


go_id: GO:0016121
term: carotene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.


go_id: GO:0016123
term: xanthophyll biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.


go_id: GO:0016124
term: xanthophyll catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of xanthophylls, oxygen-containing carotenoids.


go_id: GO:0016125
term: sterol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.


go_id: GO:0016126
term: sterol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.


go_id: GO:0016127
term: sterol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.


go_id: GO:0016128
term: phytosteroid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.


go_id: GO:0016129
term: phytosteroid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.


go_id: GO:0016130
term: phytosteroid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.


go_id: GO:0016131
term: brassinosteroid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.


go_id: GO:0016132
term: brassinosteroid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.


go_id: GO:0016133
term: brassinosteroid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.


go_id: GO:0016134
term: saponin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.


go_id: GO:0016135
term: saponin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.


go_id: GO:0016136
term: saponin catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.


go_id: GO:0016137
term: glycoside metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.


go_id: GO:0016138
term: glycoside biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.


go_id: GO:0016139
term: glycoside catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.


go_id: GO:0016143
term: S-glycoside metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.


go_id: GO:0016144
term: S-glycoside biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.


go_id: GO:0016145
term: S-glycoside catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.


go_id: GO:0016149
term: translation release factor activity, codon specific
ontology: MF
definition:
A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.


go_id: GO:0016150
term: translation release factor activity, codon nonspecific
ontology: MF
definition:
A translation release factor that is not specific to particular codons; binds to guanine nucleotides.


go_id: GO:0016154
term: pyrimidine-nucleoside phosphorylase activity
ontology: MF
definition:
Catalysis of the reaction: pyrimidine nucleoside + phosphate = pyrimidine + alpha-D-ribose 1-phosphate.


go_id: GO:0016155
term: formyltetrahydrofolate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 10-formyltetrahydrofolate + H(2)O + NADP(+) = (6S)-5,6,7,8-tetrahydrofolate + CO(2) + H(+) + NADPH.


go_id: GO:0016158
term: 3-phytase activity
ontology: MF
definition:
Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate.


go_id: GO:0016161
term: beta-amylase activity
ontology: MF
definition:
Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.


go_id: GO:0016162
term: cellulose 1,4-beta-cellobiosidase activity
ontology: MF
definition:
Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.


go_id: GO:0016163
term: nitrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP + 16 H2O = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.


go_id: GO:0016166
term: phytoene dehydrogenase activity
ontology: MF
definition:
Catalysis of the dehydrogenation of phytoene to produce a carotenoid intermediate such as phytofluene.


go_id: GO:0016167
term: glial cell-derived neurotrophic factor receptor activity
ontology: MF
definition:
Combining with glial cell line-derived neurotrophic factor and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


go_id: GO:0016168
term: chlorophyll binding
ontology: MF
definition:
Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.


go_id: GO:0016169
term: bacteriochlorophyll c binding
ontology: MF
definition:
Binding to bacteriochlorophyll c, a chlorophyll of photosynthetic bacteria, for example green sulfur bacteria.


go_id: GO:0016180
term: snRNA processing
ontology: BP
definition:
Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule. The primary function of snRNAs is processing pre-messenger RNA in the nucleus. They have also been shown to aid in the regulation of transcription factors (7SK RNA) or RNA polymerase II (B2 RNA), and maintaining the telomeres.


go_id: GO:0016182
term: synaptic vesicle budding from endosome
ontology: BP
definition:
Budding of synaptic vesicles during the formation of constitutive recycling vesicles from early endosomes.


go_id: GO:0016183
term: synaptic vesicle coating
ontology: BP
definition:
The formation of clathrin coated pits in the presynaptic membrane endocytic zone, triggered by the presence of high concentrations of synaptic vesicle components. This process leads to, but does not include budding of the membrane to form new vesicles.


go_id: GO:0016188
term: synaptic vesicle maturation
ontology: BP
definition:
Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.


go_id: GO:0016191
term: synaptic vesicle uncoating
ontology: BP
definition:
The removal of the protein coat on a synaptic vesicle following the pinching step at the end of budding from the presynaptic membrane.


go_id: GO:0016192
term: vesicle-mediated transport
ontology: BP
definition:
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.


go_id: GO:0016197
term: endosomal transport
ontology: BP
definition:
The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.


go_id: GO:0016198
term: axon choice point recognition
ontology: BP
definition:
The recognition of molecules at a choice point by an axon growth cone; at a choice point the growth cone determines the direction of its future growth.


go_id: GO:0016199
term: axon midline choice point recognition
ontology: BP
definition:
The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline.


go_id: GO:0016200
term: synaptic target attraction
ontology: BP
definition:
The process in which a neuronal cell in a multicellular organism recognizes chemoattractant signals from, and grows towards, potential targets.


go_id: GO:0016201
term: synaptic target inhibition
ontology: BP
definition:
The process in which a neuronal cell in a multicellular organism recognizes chemorepellent signals that inhibit its growth toward the source.


go_id: GO:0016203
term: muscle attachment
ontology: BP
definition:
The developmental process in which a skeletal muscle attaches to its target (such as bone or body wall).


go_id: GO:0016204
term: determination of muscle attachment site
ontology: BP
definition:
The process that mediates the transfer of information from the cells of a muscle to those of its intended target, thereby identifying the target site.


go_id: GO:0016205
term: selenocysteine methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: selenocysteine + S-adenosyl-L-methionine = Se-methylselenocysteine + S-adenosyl-homocysteine.


go_id: GO:0016206
term: catechol O-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol.


go_id: GO:0016209
term: antioxidant activity
ontology: MF
definition:
Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.


go_id: GO:0016211
term: ammonia ligase activity
ontology: MF
definition:
Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate.


go_id: GO:0016212
term: kynurenine-oxoglutarate transaminase activity
ontology: MF
definition:
Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate.


go_id: GO:0016213
term: linoleoyl-CoA desaturase activity
ontology: MF
definition:
Catalysis of the reaction: linoleoyl-CoA + reduced acceptor + O2 = gamma-linolenoyl-CoA + acceptor + 2 H2O.


go_id: GO:0016215
term: acyl-CoA desaturase activity
ontology: MF
definition:
Catalysis of the reaction: acyl-CoA + reduced acceptor + O2 = desaturated-acyl-CoA + acceptor + 2 H2O.


go_id: GO:0016216
term: isopenicillin-N synthase activity
ontology: MF
definition:
Catalysis of the reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O(2) = 2 H(2)O + isopenicillin N.


go_id: GO:0016218
term: polyketide synthase activity
ontology: MF
definition:
Catalysis of a multistep reaction that produce polyketides through decarboxylative condensation of carboxylic acids. The key chain-building reaction, a C-N bond-forming reaction, involves the generation of the characteristic peptide bond by nucleophilic attack of the amino group of an amino-acyl donor unit covalently bound to a downstream peptidyl carrier protein module (amino acyl-S-PCP) on the acyl group of an upstream electrophilic acyl- or peptidyl acyl-S-PCP chain, catalyzed by a condensation (C) domain. Supplementing these core chain-elongation domains are variable numbers of auxiliary domains that are responsible for modification of the growing polypeptide chain by a small set of iterated reactions including epimerization, N-methylation, and heterocyclization.


go_id: GO:0016222
term: procollagen-proline 4-dioxygenase complex
ontology: CC
definition:
A protein complex that catalyzes the formation of procollagen trans-4-hydroxy-L-proline and succinate from procollagen L-proline and 2-oxoglutarate, requiring Fe2+ and ascorbate. Contains two alpha subunits that contribute to most parts of the catalytic sites, and two beta subunits that are identical to protein-disulfide isomerase.


go_id: GO:0016231
term: beta-N-acetylglucosaminidase activity
ontology: MF
definition:
Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides.


go_id: GO:0016232
term: HNK-1 sulfotransferase activity
ontology: MF
definition:
Catalysis of the synthesis of the HKK-1 carbohydrate epitope; adds a sulfate group to a precursor, GlcA-beta-(1->3)-Gal-beta-(1->4)-GlcNAc-beta-(1->R), forming sulfo-3GlcA-beta-(1->3)-Gal-beta-(1->4)-GlcNAc-beta-(1->R).


go_id: GO:0016233
term: telomere capping
ontology: BP
definition:
A process in which telomeres are protected from degradation and fusion, thereby ensuring chromosome stability by protecting the ends from both degradation and from being recognized as damaged DNA. May be mediated by specific single- or double-stranded telomeric DNA binding proteins.


go_id: GO:0016235
term: aggresome
ontology: CC
definition:
An inclusion body formed by dynein-dependent retrograde transport of an aggregated protein on microtubules.


go_id: GO:0016236
term: macroautophagy
ontology: BP
definition:
The major inducible pathway for the general turnover of cytoplasmic constituents in eukaryotic cells, it is also responsible for the degradation of active cytoplasmic enzymes and organelles during nutrient starvation. Macroautophagy involves the formation of double-membrane-bounded autophagosomes which enclose the cytoplasmic constituent targeted for degradation in a membrane-bounded structure.  Autophagosomes then fuse with a lysosome (or vacuole) releasing single-membrane-bounded autophagic bodies that are then degraded within the lysosome (or vacuole). Some types of macroautophagy, e.g. pexophagy, mitophagy, involve selective targeting of the targets to be degraded.


go_id: GO:0016237
term: lysosomal microautophagy
ontology: BP
definition:
The transfer of cytosolic components into the lysosomal compartment by direct invagination of the lysosomal membrane without prior sequestration into an autophagosome. The engulfing membranes fuse, resulting in the lysosomal delivery of the cargo wrapped in a single membrane derived from the invaginated lysosomal membrane. In S. cerevisiae, the vacuole is the lysosomal compartment.


go_id: GO:0016239
term: positive regulation of macroautophagy
ontology: BP
definition:
Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.


go_id: GO:0016240
term: autophagosome membrane docking
ontology: BP
definition:
The initial attachment of an autophagosome membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.


go_id: GO:0016247
term: channel regulator activity
ontology: MF
definition:
Bonds to and modulates the activity of a channel. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.


go_id: GO:0016251
term: RNA polymerase II general transcription initiation factor activity
ontology: MF
definition:
A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase II. The general transcription factors for RNA polymerase II include TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBP). In most species, RNA polymerase II transcribes all messenger RNAs (mRNAs), most untranslated regulatory RNAs, the majority of the snoRNAs, four of the five snRNAs (U1, U2, U4, and U5), and other small noncoding RNAs. For some small RNAs there is variability between species as to whether it is transcribed by RNA polymerase II or RNA polymerase III. However there are also rare exceptions, such as Trypanosoma brucei, where RNA polymerase I transcribes certain mRNAs in addition to its normal role in rRNA transcription.


go_id: GO:0016254
term: preassembly of GPI anchor in ER membrane
ontology: BP
definition:
The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane.


go_id: GO:0016255
term: attachment of GPI anchor to protein
ontology: BP
definition:
A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain.


go_id: GO:0016256
term: N-glycan processing to lysosome
ontology: BP
definition:
The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.


go_id: GO:0016257
term: N-glycan processing to secreted and cell-surface N-glycans
ontology: BP
definition:
The modification of high-mannose (Man9-Asn) N-glycans by mannosyl-oligosaccharide 1,2-alpha-mannosidase. This may result in Man8GlcNAc2-Asn N-glycans (which in yeast may be subsequently modified by the addition of further mannose residues) or Man5GlcNAc2-Asn N-glycans that are substrates for further diversification in the Golgi apparatus.


go_id: GO:0016258
term: N-glycan diversification
ontology: BP
definition:
The generation, in the Golgi apparatus, of side chain diversity from high mannose Man5GlcNAc2-Asn N-glycans by specific glycosyltransferases and glycosidases.


go_id: GO:0016259
term: selenocysteine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving selenocysteine, an essential component of glutathione peroxidase and some other proteins.


go_id: GO:0016260
term: selenocysteine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of selenocysteine, an essential component of glutathione peroxidase and some other proteins.


go_id: GO:0016261
term: selenocysteine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of selenocysteine, an essential component of glutathione peroxidase and some other proteins.


go_id: GO:0016262
term: protein N-acetylglucosaminyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein.


go_id: GO:0016263
term: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
ontology: MF
definition:
Catalysis of the addition of a galactosyl residue to a non-reducing O-linked N-acetylgalactosamine residue in an O-glycan.


go_id: GO:0016264
term: gap junction assembly
ontology: BP
definition:
Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.


go_id: GO:0016266
term: O-glycan processing
ontology: BP
definition:
The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form a core O-glycan structure.


go_id: GO:0016267
term: O-glycan processing, core 1
ontology: BP
definition:
The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 1 O-glycan structure, Gal-beta-(1->3)-GalNAc.


go_id: GO:0016268
term: O-glycan processing, core 2
ontology: BP
definition:
The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 2 O-glycan structure, GlcNAc-beta-(1->6)[Gal-beta-(1->3)]-GalNAc.


go_id: GO:0016269
term: O-glycan processing, core 3
ontology: BP
definition:
The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 3 O-glycan structure, GlcNAc-beta-(1->3)-GalNAc.


go_id: GO:0016270
term: O-glycan processing, core 4
ontology: BP
definition:
The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.


go_id: GO:0016272
term: prefoldin complex
ontology: CC
definition:
A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.


go_id: GO:0016273
term: arginine N-methyltransferase activity
ontology: MF
definition:
Enables the transfer of a methyl group from S-adenosyl-L-methionine to an amino group of an arginine residue.


go_id: GO:0016274
term: protein-arginine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.


go_id: GO:0016277
term: [myelin basic protein]-arginine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + (myelin basic protein)-arginine = S-adenosyl-L-homocysteine + (myelin basic protein)-N(omega)-methyl-arginine.


go_id: GO:0016278
term: lysine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue.


go_id: GO:0016279
term: protein-lysine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.


go_id: GO:0016281
term: eukaryotic translation initiation factor 4F complex
ontology: CC
definition:
The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome.


go_id: GO:0016282
term: eukaryotic 43S preinitiation complex
ontology: CC
definition:
A protein complex composed of the 40S ribosomal subunit plus eIF1A, eIF3, and eIF2-GTP-bound methionyl-initiator methionine tRNA.


go_id: GO:0016286
term: small conductance calcium-activated potassium channel activity
ontology: MF
definition:
Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.


go_id: GO:0016295
term: myristoyl-[acyl-carrier-protein] hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: myristoyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + myristate.


go_id: GO:0016296
term: palmitoyl-[acyl-carrier-protein] hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: palmitoyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + palmitate.


go_id: GO:0016297
term: acyl-[acyl-carrier-protein] hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: acyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + a fatty acid.


go_id: GO:0016303
term: 1-phosphatidylinositol-3-kinase activity
ontology: MF
definition:
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ADP + 2 H(+).


go_id: GO:0016307
term: phosphatidylinositol phosphate kinase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate.


go_id: GO:0016308
term: 1-phosphatidylinositol-4-phosphate 5-kinase activity
ontology: MF
definition:
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ADP + 2 H(+).


go_id: GO:0016309
term: 1-phosphatidylinositol-5-phosphate 4-kinase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.


go_id: GO:0016310
term: phosphorylation
ontology: BP
definition:
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.


go_id: GO:0016314
term: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidylinositol-4,5-bisphosphate + phosphate.


go_id: GO:0016316
term: phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate.


go_id: GO:0016318
term: ommatidial rotation
ontology: BP
definition:
The process in which photoreceptors are arranged in ommatidia in the dorsal and ventral fields to be mirror images. The polarity is established in the imaginal discs concurrently with cell fate specification.


go_id: GO:0016319
term: mushroom body development
ontology: BP
definition:
The process whose specific outcome is the progression of the mushroom body over time, from its formation to the mature structure. The mushroom body is composed of the prominent neuropil structures of the insect central brain, thought to be crucial for olfactory associated learning. These consist mainly of a bulbous calyx and tightly packaged arrays of thin parallel fibers of the Kenyon cells.


go_id: GO:0016321
term: female meiosis chromosome segregation
ontology: BP
definition:
The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.


go_id: GO:0016322
term: neuron remodeling
ontology: BP
definition:
The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.


go_id: GO:0016323
term: basolateral plasma membrane
ontology: CC
definition:
The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.


go_id: GO:0016325
term: oocyte microtubule cytoskeleton organization
ontology: BP
definition:
Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster.


go_id: GO:0016328
term: lateral plasma membrane
ontology: CC
definition:
The portion of the plasma membrane at the lateral side of the cell. In epithelial cells, lateral plasma membranes are on the sides of cells which lie at the interface of adjacent cells.


go_id: GO:0016330
term: second mitotic wave involved in compound eye morphogenesis
ontology: BP
definition:
A discrete cell cycle in the third instar eye imaginal disc after progression of the morphogenetic furrow that contributes to compound eye morphogenesis. It is essential for generation of a sufficient pool of uncommitted cells to develop complete ommatidia.


go_id: GO:0016332
term: establishment or maintenance of polarity of embryonic epithelium
ontology: BP
definition:
Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization of epithelial cells in an embryo.


go_id: GO:0016333
term: morphogenesis of follicular epithelium
ontology: BP
definition:
The process in which the anatomical structures of a follicular epithelium are generated and organized.


go_id: GO:0016334
term: establishment or maintenance of polarity of follicular epithelium
ontology: BP
definition:
Any cellular process that results in the specification, formation or maintenance of a polarized follicular epithelial sheet.


go_id: GO:0016335
term: morphogenesis of larval imaginal disc epithelium
ontology: BP
definition:
The process in which the anatomical structures of a larval imaginal disc epithelium are generated and organized.


go_id: GO:0016336
term: establishment or maintenance of polarity of larval imaginal disc epithelium
ontology: BP
definition:
Any cellular process that results in the specification, formation or maintenance of a polarized larval imaginal disc epithelium.


go_id: GO:0016338
term: calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
ontology: BP
definition:
The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.


go_id: GO:0016339
term: calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
ontology: BP
definition:
The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.


go_id: GO:0016340
term: calcium-dependent cell-matrix adhesion
ontology: BP
definition:
The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction.


go_id: GO:0016342
term: catenin complex
ontology: CC
definition:
Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton.


go_id: GO:0016344
term: meiotic chromosome movement towards spindle pole
ontology: BP
definition:
The cell cycle process in which the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis.


go_id: GO:0016345
term: female meiotic chromosome movement towards spindle pole
ontology: BP
definition:
The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during female meiosis.


go_id: GO:0016346
term: male meiotic chromosome movement towards spindle pole
ontology: BP
definition:
The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during male meiosis.


go_id: GO:0016348
term: imaginal disc-derived leg joint morphogenesis
ontology: BP
definition:
The process in which the anatomical structures of an imaginal disc-derived leg joint are generated and organized. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner. An example of this is found in Drosophila melanogaster.


go_id: GO:0016358
term: dendrite development
ontology: BP
definition:
The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.


go_id: GO:0016360
term: sensory organ precursor cell fate determination
ontology: BP
definition:
The process in which a cell becomes capable of differentiating autonomously into a sensory organ precursor cell regardless of its environment; upon determination, the cell fate cannot be reversed.


go_id: GO:0016361
term: activin receptor activity, type I
ontology: MF
definition:
Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals.


go_id: GO:0016362
term: activin receptor activity, type II
ontology: MF
definition:
Combining with activin to initiate a change in cell activity; upon ligand binding, binds to and catalyses the phosphorylation of a type I activin receptor.


go_id: GO:0016402
term: pristanoyl-CoA oxidase activity
ontology: MF
definition:
Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.


go_id: GO:0016404
term: 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
ontology: MF
definition:
Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+.


go_id: GO:0016421
term: CoA carboxylase activity
ontology: MF
definition:
Catalysis of the joining of a carboxyl group to a molecule that is attached to CoA, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016422
term: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am.


go_id: GO:0016423
term: tRNA (guanine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylguanine.


go_id: GO:0016426
term: tRNA (adenine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methyladenine.


go_id: GO:0016427
term: tRNA (cytosine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylcytosine.


go_id: GO:0016428
term: tRNA (cytosine-5-)-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine.


go_id: GO:0016429
term: tRNA (adenine-N1-)-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.


go_id: GO:0016430
term: tRNA (adenine-N6-)-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N6-methyladenine.


go_id: GO:0016432
term: tRNA-uridine aminocarboxypropyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA uridine = 5'-methylthioadenosine + tRNA 3-(3-amino-3-carboxypropyl)-uridine.


go_id: GO:0016433
term: rRNA (adenine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyladenine.


go_id: GO:0016434
term: rRNA (cytosine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylcytosine.


go_id: GO:0016435
term: rRNA (guanine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylguanine.


go_id: GO:0016436
term: rRNA (uridine) methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyluridine.


go_id: GO:0016438
term: tRNA-queuosine beta-mannosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: GDP-mannose + tRNA(Asp)-queuosine = GDP + tRNA(Asp)-O-5''-beta-D-mannosylqueuosine.


go_id: GO:0016442
term: RISC complex
ontology: CC
definition:
A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.


go_id: GO:0016443
term: bidentate ribonuclease III activity
ontology: MF
definition:
Catalysis of the digestion of double-stranded RNAs into 20 to 30-nucleotide products. These products typically associate to the RNA-induced silencing complex and serve as guide RNAs for posttranslational RNA interference.


go_id: GO:0016446
term: somatic hypermutation of immunoglobulin genes
ontology: BP
definition:
Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins.


go_id: GO:0016447
term: somatic recombination of immunoglobulin gene segments
ontology: BP
definition:
The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus.


go_id: GO:0016456
term: X chromosome located dosage compensation complex, transcription activating
ontology: CC
definition:
An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.


go_id: GO:0016457
ontology: BP
term:
dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome

definition:
The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on the X chromosome of the heterogametic sex, ultimately resulting in a two-fold increase in transcription from this chromosome. An example of this is found in Drosophila melanogaster.


go_id: GO:0016459
term: myosin complex
ontology: CC
definition:
A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.


go_id: GO:0016460
term: myosin II complex
ontology: CC
definition:
A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures.


go_id: GO:0016462
term: pyrophosphatase activity
ontology: MF
definition:
Catalysis of the hydrolysis of a pyrophosphate bond (diphosphate bond) between two phosphate groups.


go_id: GO:0016463
term: P-type zinc transporter activity
ontology: MF
definition:
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Zn2+(in) -> ADP + phosphate + Zn2+(out).


go_id: GO:0016464
term: chloroplast protein-transporting ATPase activity
ontology: MF
definition:
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate; drives the transport of proteins into the chloroplast stroma.


go_id: GO:0016465
term: chaperonin ATPase complex
ontology: CC
definition:
Multisubunit protein complex with 2x7 (Type I, in most cells) or 2x8 (Type II, in Archaea) ATP-binding sites involved in maintaining an unfolded polypeptide structure before folding or to entry into mitochondria and chloroplasts.


go_id: GO:0016469
term: proton-transporting two-sector ATPase complex
ontology: CC
definition:
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.


go_id: GO:0016471
term: vacuolar proton-transporting V-type ATPase complex
ontology: CC
definition:
A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.


go_id: GO:0016472
term: sodium ion-transporting two-sector ATPase complex
ontology: CC
definition:
A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.


go_id: GO:0016473
term: sodium ion-transporting F-type ATPase complex
ontology: CC
definition:
A sodium ion-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism.


go_id: GO:0016474
term: sodium ion-transporting V-type ATPase complex
ontology: CC
definition:
A sodium ion-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of sodium ions across a concentration gradient. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis.


go_id: GO:0016477
term: cell migration
ontology: BP
definition:
The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.


go_id: GO:0016479
term: negative regulation of transcription by RNA polymerase I
ontology: BP
definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase I.


go_id: GO:0016480
term: negative regulation of transcription by RNA polymerase III
ontology: BP
definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase III.


go_id: GO:0016485
term: protein processing
ontology: BP
definition:
Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein.


go_id: GO:0016487
term: farnesol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.


go_id: GO:0016488
term: farnesol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.


go_id: GO:0016490
term: structural constituent of peritrophic membrane
ontology: MF
definition:
The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.


go_id: GO:0016491
term: oxidoreductase activity
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.


go_id: GO:0016492
term: G protein-coupled neurotensin receptor activity
ontology: MF
definition:
Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.


go_id: GO:0016493
term: C-C chemokine receptor activity
ontology: MF
definition:
Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.


go_id: GO:0016494
term: C-X-C chemokine receptor activity
ontology: MF
definition:
Combining with a C-X-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif.


go_id: GO:0016495
term: C-X3-C chemokine receptor activity
ontology: MF
definition:
Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.


go_id: GO:0016496
term: substance P receptor activity
ontology: MF
definition:
Combining with substance P, the peptide Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met, to initiate a change in cell activity.


go_id: GO:0016497
term: substance K receptor activity
ontology: MF
definition:
Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.


go_id: GO:0016498
term: neuromedin K receptor activity
ontology: MF
definition:
Combining with neuromedin K, the peptide Asp-Met-His-Asp-Phe-Phe-Val-Gly-Leu-Met to initiate a change in cell activity.


go_id: GO:0016502
term: nucleotide receptor activity
ontology: MF
definition:
Combining with a nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A nucleotide is a compound that consists of a nucleoside esterified with a phosphate molecule.


go_id: GO:0016503
term: pheromone receptor activity
ontology: MF
definition:
Combining with a pheromone to initiate a change in cell activity. A pheromone is a substance used in olfactory communication between organisms of the same species eliciting a change in sexual or social behavior.


go_id: GO:0016504
term: peptidase activator activity
ontology: MF
definition:
Binds to and increases the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.


go_id: GO:0016507
term: mitochondrial fatty acid beta-oxidation multienzyme complex
ontology: CC
definition:
A complex that includes the long-chain 3-hydroxyacyl-CoA dehydrogenase and long-chain enoyl-CoA hydratase activities in two subunits (alpha and beta), catalyzing two steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix.


go_id: GO:0016508
term: long-chain-enoyl-CoA hydratase activity
ontology: MF
definition:
Catalysis of the reaction: a long-chain (3S)-3-hydroxyacyl-CoA = a long-chain trans-2-enoyl-CoA + H2O. A long-chain acyl-CoA is an acyl-CoA thioester where the acyl chain contains 13 to 22 carbon atoms.


go_id: GO:0016509
term: long-chain-3-hydroxyacyl-CoA dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD(P)+ = 3-oxoacyl-CoA + NAD(P)H + H+, where the acyl group is a long-chain fatty acid residue. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.


go_id: GO:0016513
term: core-binding factor complex
ontology: CC
definition:
A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.


go_id: GO:0016514
term: SWI/SNF complex
ontology: CC
definition:
A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the yeast SNF2 or mammalian SMARCA4/BAF190A/BRG1 gene, or an ortholog thereof.


go_id: GO:0016515
term: interleukin-13 receptor activity
ontology: MF
definition:
Combining with interleukin-13 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


go_id: GO:0016516
term: interleukin-4 receptor complex
ontology: CC
definition:
A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.


go_id: GO:0016517
term: interleukin-12 receptor activity
ontology: MF
definition:
Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


go_id: GO:0016519
term: gastric inhibitory peptide receptor activity
ontology: MF
definition:
Combining with gastric inhibitory peptide (GIP) and transmitting the signal across the membrane to activate an associated G-protein.


go_id: GO:0016521
term: pituitary adenylate cyclase activating polypeptide activity
ontology: MF
definition:
The action characteristic of pituitary adenylate cyclase activating polypeptide, a peptide produced in the hypothalamus that binds to receptors to exert pleiotropic effects including control of neurotransmitter release, vasodilation, bronchodilation, activation of intestinal motility, increase in insulin and histamine secretion, immune modulation, and stimulation of cell proliferation and differentiation.


go_id: GO:0016524
term: latrotoxin receptor activity
ontology: MF
definition:
Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


go_id: GO:0016529
term: sarcoplasmic reticulum
ontology: CC
definition:
A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.


go_id: GO:0016532
term: superoxide dismutase copper chaperone activity
ontology: MF
definition:
A copper chaperone activity that specifically delivers copper to the Cu-Zn superoxide dismutase, to activate superoxide dismutase activity.


go_id: GO:0016533
term: protein kinase 5 complex
ontology: CC
definition:
A protein complex that has protein serine/threonine kinase activity; in mammals composed of catalytic subunit CDK5 and regulatory subunits CDK5R1 or CDK5R2. Contrary to its gene symbol, CDK5 is not cyclin-dependent.


go_id: GO:0016538
term: cyclin-dependent protein serine/threonine kinase regulator activity
ontology: MF
definition:
Modulates the activity of a cyclin-dependent protein serine/threonine kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins.


go_id: GO:0016539
term: intein-mediated protein splicing
ontology: BP
definition:
The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues.


go_id: GO:0016540
term: protein autoprocessing
ontology: BP
definition:
Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.


go_id: GO:0016543
term: male courtship behavior, orientation prior to leg tapping and wing vibration
ontology: BP
definition:
The process during courtship, where the male orients towards a potential partner. An example of this is found in Drosophila melanogaster.


go_id: GO:0016544
term: male courtship behavior, tapping to detect pheromone
ontology: BP
definition:
The process during courtship where the male insect taps the female with his frontal leg. An example of this is found in Drosophila melanogaster.


go_id: GO:0016545
term: male courtship behavior, veined wing vibration
ontology: BP
definition:
The process during courtship where the male insect vibrates his wings. An example of this is found in Drosophila melanogaster.


go_id: GO:0016546
term: male courtship behavior, proboscis-mediated licking
ontology: BP
definition:
The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.


go_id: GO:0016553
term: base conversion or substitution editing
ontology: BP
definition:
Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s).


go_id: GO:0016556
term: mRNA modification
ontology: BP
definition:
The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.


go_id: GO:0016558
term: protein import into peroxisome matrix
ontology: BP
definition:
The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported. The cargo protein is then released into the peroxisome matrix.


go_id: GO:0016559
term: peroxisome fission
ontology: BP
definition:
The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments.


go_id: GO:0016560
term: protein import into peroxisome matrix, docking
ontology: BP
definition:
The process in which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the peroxisomal membrane.


go_id: GO:0016561
term: protein import into peroxisome matrix, translocation
ontology: BP
definition:
The process in which proteins are moved across the peroxisomal membrane into the matrix. It is likely that the peroxisome targeting sequence receptor remains associated with cargo proteins during translocation.


go_id: GO:0016562
term: protein import into peroxisome matrix, receptor recycling
ontology: BP
definition:
The process in which peroxisome targeting sequence receptors dissociates from cargo proteins and are returned to the cytosol.


go_id: GO:0016580
term: Sin3 complex
ontology: CC
definition:
A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.


go_id: GO:0016581
term: NuRD complex
ontology: CC
definition:
An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins.


go_id: GO:0016586
term: RSC-type complex
ontology: CC
definition:
A SWI/SNF-type complex that contains a bromodomain containing-protein, such as yeast Rsc1 or Rsc4 or mammalian PB1/BAF180. The RSC complex is generally recruited to RNA polymerase III promoters and is specifically recruited to RNA polymerase II promoters by transcriptional activators and repressors; it is also involved in non-homologous end joining.


go_id: GO:0016587
term: Isw1 complex
ontology: CC
definition:
A protein complex that contains an Isw1 subunit from the ISWI-family of ATPases and acts to modify chromatin structure.


go_id: GO:0016589
term: NURF complex
ontology: CC
definition:
An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2L in mammals), a NURF301 homolog (BPTF in humans), and additional subunits, though the composition of these additional subunits varies slightly with species. NURF is involved in regulation of transcription from TRNA polymerase II promoters.


go_id: GO:0016590
term: ACF complex
ontology: CC
definition:
An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and generally no other subunits, though Xenopus is an exception with a third non-conserved subunit. ACF plays roles in regulation of RNA polymerase II transcription and in DNA replication and repair.


go_id: GO:0016591
term: RNA polymerase II, holoenzyme
ontology: CC
definition:
A nuclear DNA-directed RNA polymerase complex containing an RNA polymerase II core enzyme as well as additional proteins and transcription factor complexes, that are capable of promoter recognition and transcription initiation from an RNA polymerase II promoter in vivo. These additional components may include general transcription factor complexes TFIIA, TFIID, TFIIE, TFIIF, or TFIIH, as well as Mediator, SWI/SNF, GCN5, or SRBs and confer the ability to recognize promoters.


go_id: GO:0016592
term: mediator complex
ontology: CC
definition:
A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The mediator complex is required for activation of transcription of most protein-coding genes, but can also act as a transcriptional corepressor. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.


go_id: GO:0016593
term: Cdc73/Paf1 complex
ontology: CC
definition:
A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.


go_id: GO:0016598
term: protein arginylation
ontology: BP
definition:
The conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway.


go_id: GO:0016600
term: flotillin complex
ontology: CC
definition:
A protein complex that contains flotillin-1 and flotillin-2, and may contain associated proteins. Flotillins associate into membrane microdomains resembling caveolae.


go_id: GO:0016601
term: Rac protein signal transduction
ontology: BP
definition:
The series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state.


go_id: GO:0016602
term: CCAAT-binding factor complex
ontology: CC
definition:
A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.


go_id: GO:0016604
term: nuclear body
ontology: CC
definition:
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.


go_id: GO:0016605
term: PML body
ontology: CC
definition:
A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection.


go_id: GO:0016606
term: LYSP100-associated nuclear domain
ontology: CC
definition:
A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.


go_id: GO:0016607
term: nuclear speck
ontology: CC
definition:
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.


go_id: GO:0016608
term: growth hormone-releasing hormone activity
ontology: MF
definition:
The action characteristic of growth hormone-releasing hormone, any of a family of peptide hormones that act on the anterior pituitary to stimulate the secretion of growth hormone and exert a trophic effect on the gland.


go_id: GO:0016610
term: nitrogenase complex
ontology: CC
definition:
An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.


go_id: GO:0016611
term: iron-iron nitrogenase complex
ontology: CC
definition:
An enzyme complex containing an iron-iron cluster found in species such as the photosynthetic bacterium Rhodobacter capsulatus. It is composed of two main subunits, dinitrogenase and nitrogenase reductase. Dinitrogenase, the iron-iron containing subunit, has an alpha1-beta2 or alpha2-beta2 structure, and the nitrogenase reductase subunit is a homodimer. Functions in the catalysis of the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.


go_id: GO:0016612
term: molybdenum-iron nitrogenase complex
ontology: CC
definition:
An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.


go_id: GO:0016613
term: vanadium-iron nitrogenase complex
ontology: CC
definition:
An enzyme complex containing a vanadium-iron cluster found in some species, such as Azotobacter vinelandii. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the vanadium-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.


go_id: GO:0016614
term: oxidoreductase activity, acting on CH-OH group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016616
term: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.


go_id: GO:0016620
term: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016622
term: oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.


go_id: GO:0016623
term: oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016624
term: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.


go_id: GO:0016625
ontology: MF
term:
oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.


go_id: GO:0016627
term: oxidoreductase activity, acting on the CH-CH group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016628
term: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016629
term: 12-oxophytodienoate reductase activity
ontology: MF
definition:
Catalysis of the reaction: 8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-en-1-yl}cyclopentyl]octanoate + NADP(+) = (15Z)-12-oxophyto-10,15-dienoate + H(+) + NADPH.


go_id: GO:0016631
term: enoyl-[acyl-carrier-protein] reductase activity
ontology: MF
definition:
Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.


go_id: GO:0016632
term: oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a cytochrome.


go_id: GO:0016633
term: galactonolactone dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: L-galactono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c.


go_id: GO:0016634
term: oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016635
ontology: MF
term:
oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.


go_id: GO:0016636
term: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.


go_id: GO:0016638
term: oxidoreductase activity, acting on the CH-NH2 group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016639
term: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.


go_id: GO:0016640
term: oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a cytochrome molecule.


go_id: GO:0016641
term: oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.


go_id: GO:0016642
term: oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a disulfide group.


go_id: GO:0016643
term: oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.


go_id: GO:0016645
term: oxidoreductase activity, acting on the CH-NH group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016646
term: oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016647
term: oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016648
term: oxidoreductase activity, acting on the CH-NH group of donors, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces disulfide.


go_id: GO:0016649
ontology: MF
term:
oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.


go_id: GO:0016651
term: oxidoreductase activity, acting on NAD(P)H
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016652
term: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces NAD+ or NADP.


go_id: GO:0016653
term: oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a heme protein.


go_id: GO:0016655
term: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.


go_id: GO:0016657
term: oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a nitrogenous group.


go_id: GO:0016661
term: oxidoreductase activity, acting on other nitrogenous compounds as donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016662
term: oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.


go_id: GO:0016663
term: oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016664
ontology: MF
term:
oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an iron-sulfur protein.


go_id: GO:0016667
term: oxidoreductase activity, acting on a sulfur group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016668
term: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016669
term: oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a cytochrome.


go_id: GO:0016670
term: oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016671
term: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.


go_id: GO:0016672
ontology: MF
term:
oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces quinone or a related compound.


go_id: GO:0016673
term: oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.


go_id: GO:0016675
term: oxidoreductase activity, acting on a heme group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016677
term: oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a nitrogenous group.


go_id: GO:0016679
term: oxidoreductase activity, acting on diphenols and related substances as donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016680
ontology: MF
term:
oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016682
term: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.


go_id: GO:0016684
term: oxidoreductase activity, acting on peroxide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the peroxide group acts as a hydrogen or electron acceptor.


go_id: GO:0016690
term: diarylpropane peroxidase activity
ontology: MF
definition:
Catalysis of the reaction: (3,4-dimethoxyphenyl)methanol + H2O2 = 3,4-dimethoxybenzaldehyde + 2 H2O.


go_id: GO:0016696
term: oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces NAD or NADP.


go_id: GO:0016697
term: oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.


go_id: GO:0016699
term: oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces an iron-sulfur protein.


go_id: GO:0016701
term: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.


go_id: GO:0016702
ontology: MF
term:
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.


go_id: GO:0016703
ontology: MF
term:
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and one oxygen atom is incorporated into a donor.


go_id: GO:0016705
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.


go_id: GO:0016706
term: 2-oxoglutarate-dependent dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.


go_id: GO:0016707
term: gibberellin 3-beta-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.


go_id: GO:0016708
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and two atoms of oxygen are incorporated into one donor.


go_id: GO:0016709
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016712
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016713
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced iron-sulfur protein and one other donor, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016714
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced pteridine and one other donor, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016715
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced ascorbate and one other donor, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016716
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and one atom of oxygen is incorporated into one donor.


go_id: GO:0016717
ontology: MF
term:
oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

definition:
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water.


go_id: GO:0016721
term: oxidoreductase activity, acting on superoxide radicals as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a superoxide radical (O2- or O2.-) acts as a hydrogen or electron acceptor.


go_id: GO:0016723
term: oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.


go_id: GO:0016724
term: oxidoreductase activity, acting on metal ions, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction in which the oxidation state of metal ion is altered and oxygen acts as an electron acceptor.


go_id: GO:0016725
term: oxidoreductase activity, acting on CH or CH2 groups
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016726
term: oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.


go_id: GO:0016727
term: oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.


go_id: GO:0016728
term: oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a disulfide group.


go_id: GO:0016730
term: oxidoreductase activity, acting on iron-sulfur proteins as donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016731
term: oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces NAD or NADP.


go_id: GO:0016732
term: oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces dinitrogen.


go_id: GO:0016737
term: oxidoreductase activity, acting on reduced flavodoxin as donor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016738
term: oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces dinitrogen.


go_id: GO:0016740
term: transferase activity
ontology: MF
definition:
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.


go_id: GO:0016742
term: hydroxymethyl-, formyl- and related transferase activity
ontology: MF
definition:
Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).


go_id: GO:0016743
term: carboxyl- or carbamoyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).


go_id: GO:0016744
term: transketolase or transaldolase activity
ontology: MF
definition:
Catalysis of the transfer of an aldehyde or ketonic group from one compound (donor) to another (acceptor).


go_id: GO:0016747
term: acyltransferase activity, transferring groups other than amino-acyl groups
ontology: MF
definition:
Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).


go_id: GO:0016754
term: sinapoylglucose-malate O-sinapoyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: (S)-malate + 1-O-sinapoyl-beta-D-glucose = D-glucose + sinapoyl (S)-malate.


go_id: GO:0016759
term: cellulose synthase activity
ontology: MF
definition:
Catalysis of the reaction: nucleoside-disphosphate-glucose + ((1,4)-beta-D-glucosyl)(n) = nucleoside-disphosphate + ((1,4)-beta-D-glucosyl)(n+1).


go_id: GO:0016760
term: cellulose synthase (UDP-forming) activity
ontology: MF
definition:
Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).


go_id: GO:0016761
term: cellulose synthase (GDP-forming) activity
ontology: MF
definition:
Catalysis of the reaction: GDP-glucose + ((1,4)-beta-D-glucosyl)(n) = GDP + ((1,4)-beta-D-glucosyl)(n+1).


go_id: GO:0016762
term: xyloglucan:xyloglucosyl transferase activity
ontology: MF
definition:
Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.


go_id: GO:0016765
term: transferase activity, transferring alkyl or aryl (other than methyl) groups
ontology: MF
definition:
Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).


go_id: GO:0016768
term: spermine synthase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.


go_id: GO:0016772
term: transferase activity, transferring phosphorus-containing groups
ontology: MF
definition:
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).


go_id: GO:0016773
term: phosphotransferase activity, alcohol group as acceptor
ontology: MF
definition:
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).


go_id: GO:0016774
term: phosphotransferase activity, carboxyl group as acceptor
ontology: MF
definition:
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a carboxyl group (acceptor).


go_id: GO:0016775
term: phosphotransferase activity, nitrogenous group as acceptor
ontology: MF
definition:
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).


go_id: GO:0016776
term: phosphotransferase activity, phosphate group as acceptor
ontology: MF
definition:
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).


go_id: GO:0016780
term: phosphotransferase activity, for other substituted phosphate groups
ontology: MF
definition:
Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor).


go_id: GO:0016781
term: phosphotransferase activity, paired acceptors
ontology: MF
definition:
Catalysis of the transfer of two phosphate groups from a donor, such as ATP, to two different acceptors.


go_id: GO:0016782
term: transferase activity, transferring sulphur-containing groups
ontology: MF
definition:
Catalysis of the transfer of a sulfur-containing group from one compound (donor) to another (acceptor).


go_id: GO:0016785
term: selenotransferase activity
ontology: MF
definition:
Catalysis of the transfer of a selenium-containing group from one compound (donor) to another (acceptor).


go_id: GO:0016790
term: thiolester hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A.


go_id: GO:0016793
term: triphosphoric monoester hydrolase activity
ontology: MF
definition:
Catalysis of the hydrolysis of a triphosphoester to give a triphosphate group and a free hydroxyl group.


go_id: GO:0016794
term: diphosphoric monoester hydrolase activity
ontology: MF
definition:
Catalysis of the hydrolysis of a diphosphoester to give a diphosphate group and a free hydroxyl group.


go_id: GO:0016796
ontology: MF
term:
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters

definition:
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.


go_id: GO:0016797
ontology: MF
term:
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters

definition:
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.


go_id: GO:0016807
term: cysteine-type carboxypeptidase activity
ontology: MF
definition:
Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.


go_id: GO:0016813
term: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
ontology: MF
definition:
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.


go_id: GO:0016814
term: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
ontology: MF
definition:
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.


go_id: GO:0016815
term: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles
ontology: MF
definition:
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.


go_id: GO:0016823
term: hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
ontology: MF
definition:
Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.


go_id: GO:0016829
term: lyase activity
ontology: MF
definition:
Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.


go_id: GO:0016830
term: carbon-carbon lyase activity
ontology: MF
definition:
Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.


go_id: GO:0016832
term: aldehyde-lyase activity
ontology: MF
definition:
Catalysis of the cleavage of a C-C bond in a molecule containing a hydroxyl group and a carbonyl group to form two smaller molecules, each being an aldehyde or a ketone.


go_id: GO:0016833
term: oxo-acid-lyase activity
ontology: MF
definition:
Catalysis of the cleavage of a C-C bond by other means than by hydrolysis or oxidation, of a 3-hydroxy acid.


go_id: GO:0016837
term: carbon-oxygen lyase activity, acting on polysaccharides
ontology: MF
definition:
Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a polysaccharide.


go_id: GO:0016840
term: carbon-nitrogen lyase activity
ontology: MF
definition:
Catalysis of the release of ammonia or one of its derivatives, with the formation of a double bond or ring. Enzymes with this activity may catalyze the actual elimination of the ammonia, amine or amide, e.g. CH-CH(-NH-R) = C=CH- + NH2-R. Others, however, catalyze elimination of another component, e.g. water, which is followed by spontaneous reactions that lead to breakage of the C-N bond, e.g. L-serine ammonia-lyase (EC:4.3.1.17), so that the overall reaction is C(-OH)-CH(-NH2) = CH2-CO- + NH3, i.e. an elimination with rearrangement. The sub-subclasses of EC:4.3 are the ammonia-lyases (EC:4.3.1), lyases acting on amides, amidines, etc. (EC:4.3.2), the amine-lyases (EC:4.3.3), and other carbon-nitrogen lyases (EC:4.3.99).


go_id: GO:0016841
term: ammonia-lyase activity
ontology: MF
definition:
Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.


go_id: GO:0016842
term: amidine-lyase activity
ontology: MF
definition:
Catalysis of the release of amides or amidines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amide or amidine as a substrate.


go_id: GO:0016843
term: amine-lyase activity
ontology: MF
definition:
Catalysis of the release of amines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amine as a substrate.


go_id: GO:0016847
term: 1-aminocyclopropane-1-carboxylate synthase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H(+).


go_id: GO:0016849
term: phosphorus-oxygen lyase activity
ontology: MF
definition:
Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.


go_id: GO:0016851
term: magnesium chelatase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + H2O + Mg2+ + protoporphyrin IX = ADP + 3 H+ + Mg-protoporphyrin IX + phosphate.


go_id: GO:0016853
term: isomerase activity
ontology: MF
definition:
Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.


go_id: GO:0016855
term: racemase and epimerase activity, acting on amino acids and derivatives
ontology: MF
definition:
Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.


go_id: GO:0016856
term: racemase and epimerase activity, acting on hydroxy acids and derivatives
ontology: MF
definition:
Catalysis of a reaction that alters the configuration of one or more chiral centers in a hydroxy acid molecule.


go_id: GO:0016857
term: racemase and epimerase activity, acting on carbohydrates and derivatives
ontology: MF
definition:
Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.


go_id: GO:0016859
term: cis-trans isomerase activity
ontology: MF
definition:
Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers.


go_id: GO:0016860
term: intramolecular oxidoreductase activity
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, and no oxidized product appears.


go_id: GO:0016861
term: intramolecular oxidoreductase activity, interconverting aldoses and ketoses
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.


go_id: GO:0016862
term: intramolecular oxidoreductase activity, interconverting keto- and enol-groups
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is a keto- or an enol-group, are the same molecule, and no oxidized product appears.


go_id: GO:0016863
term: intramolecular oxidoreductase activity, transposing C=C bonds
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.


go_id: GO:0016864
term: intramolecular oxidoreductase activity, transposing S-S bonds
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more sulfur-sulfur bonds in the molecule are rearranged, and no oxidized product appears.


go_id: GO:0016866
term: intramolecular transferase activity
ontology: MF
definition:
Catalysis of the transfer of a functional group from one position to another within a single molecule.


go_id: GO:0016868
term: intramolecular transferase activity, phosphotransferases
ontology: MF
definition:
Catalysis of the transfer of a phosphate group from one position to another within a single molecule.


go_id: GO:0016874
term: ligase activity
ontology: MF
definition:
Catalysis of the joining of two molecules, or two groups within a single molecule, using the energy from the hydrolysis of ATP, a similar triphosphate, or a pH gradient.


go_id: GO:0016875
term: ligase activity, forming carbon-oxygen bonds
ontology: MF
definition:
Catalysis of the joining of two molecules via a carbon-oxygen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016877
term: ligase activity, forming carbon-sulfur bonds
ontology: MF
definition:
Catalysis of the joining of two molecules via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016878
term: acid-thiol ligase activity
ontology: MF
definition:
Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016879
term: ligase activity, forming carbon-nitrogen bonds
ontology: MF
definition:
Catalysis of the joining of two molecules, or two groups within a single molecule, via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016880
term: acid-ammonia (or amide) ligase activity
ontology: MF
definition:
Catalysis of the ligation of an acid to ammonia (NH3) or an amide via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016881
term: acid-amino acid ligase activity
ontology: MF
definition:
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016882
term: cyclo-ligase activity
ontology: MF
definition:
Catalysis of the joining of two groups within a single molecule via a carbon-nitrogen bond, forming heterocyclic ring, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016884
term: carbon-nitrogen ligase activity, with glutamine as amido-N-donor
ontology: MF
definition:
Catalysis of the transfer of the amide nitrogen of glutamine to a substrate. Usually composed of two subunits or domains, one that first hydrolyzes glutamine, and then transfers the resulting ammonia to the second subunit (or domain), where it acts as a source of nitrogen.


go_id: GO:0016885
term: ligase activity, forming carbon-carbon bonds
ontology: MF
definition:
Catalysis of the joining of two molecules via a carbon-carbon bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016886
term: ligase activity, forming phosphoric ester bonds
ontology: MF
definition:
Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


go_id: GO:0016887
term: ATP hydrolysis activity
ontology: MF
definition:
Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.


go_id: GO:0016888
term: endodeoxyribonuclease activity, producing 5'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.


go_id: GO:0016889
term: endodeoxyribonuclease activity, producing 3'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.


go_id: GO:0016890
term: site-specific endodeoxyribonuclease activity, specific for altered base
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.


go_id: GO:0016891
term: endoribonuclease activity, producing 5'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.


go_id: GO:0016892
term: endoribonuclease activity, producing 3'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.


go_id: GO:0016893
ontology: MF
term:
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters

definition:
Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 5'-phosphomonoesters.


go_id: GO:0016894
ontology: MF
term:
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters

definition:
Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters.


go_id: GO:0016895
term: exodeoxyribonuclease activity, producing 5'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.


go_id: GO:0016896
term: exoribonuclease activity, producing 5'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.


go_id: GO:0016897
term: exoribonuclease activity, producing 3'-phosphomonoesters
ontology: MF
definition:
Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.


go_id: GO:0016898
term: oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a cytochrome molecule.


go_id: GO:0016899
term: oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.


go_id: GO:0016900
term: oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a disulfide molecule.


go_id: GO:0016901
ontology: MF
term:
oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor

definition:
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.


go_id: GO:0016903
term: oxidoreductase activity, acting on the aldehyde or oxo group of donors
ontology: MF
definition:
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


go_id: GO:0016907
term: G protein-coupled acetylcholine receptor activity
ontology: MF
definition:
Combining with acetylcholine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


go_id: GO:0016913
term: follicle-stimulating hormone activity
ontology: MF
definition:
The action characteristic of follicle-stimulating hormone (FSH), a gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland. Upon receptor binding, FSH stimulates growth of Graafian follicles in the ovaries in females, and stimulates the epithelium of the seminiferous tubules to increase spermatogenesis.


go_id: GO:0016914
term: follicle-stimulating hormone complex
ontology: CC
definition:
A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.


go_id: GO:0016917
term: GABA receptor activity
ontology: MF
definition:
Combining with gamma-aminobutyric acid (GABA), and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. (GABA, 4-aminobutyrate) is an amino acid which acts as a neurotransmitter in some organisms.


go_id: GO:0016918
term: retinal binding
ontology: MF
definition:
Binding to retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina.


go_id: GO:0016922
term: nuclear receptor binding
ontology: MF
definition:
Binding to a nuclear receptor protein. Nuclear receptor proteins are DNA-binding transcription factors which are regulated by binding to a ligand.


go_id: GO:0016925
term: protein sumoylation
ontology: BP
definition:
The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.


go_id: GO:0016926
term: protein desumoylation
ontology: BP
definition:
The process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.


go_id: GO:0016929
term: deSUMOylase activity
ontology: MF
definition:
An thiol-dependent isopeptidase activity that cleaves SUMO from a target protein to which it is conjugated.


go_id: GO:0016933
term: extracellularly glycine-gated ion channel activity
ontology: MF
definition:
Enables the transmembrane transfer of an ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.


go_id: GO:0016934
term: extracellularly glycine-gated chloride channel activity
ontology: MF
definition:
Enables the transmembrane transfer of a chloride ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.


go_id: GO:0016935
term: glycine-gated chloride channel complex
ontology: CC
definition:
A protein complex that forms a transmembrane channel through which chloride ions may pass in response to glycine binding to the channel complex or one of its constituent parts.


go_id: GO:0016937
term: short-branched-chain-acyl-CoA dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor, where the acyl group is a short branched chain fatty acid residue.


go_id: GO:0016939
term: kinesin II complex
ontology: CC
definition:
A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes.


go_id: GO:0016941
term: natriuretic peptide receptor activity
ontology: MF
definition:
Combining with a natriuretic peptide and transmitting the signal to initiate a change in cell activity.


go_id: GO:0016942
term: insulin-like growth factor binding protein complex
ontology: CC
definition:
A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development.


go_id: GO:0016964
term: alpha-2 macroglobulin receptor activity
ontology: MF
definition:
Combining with alpha-2 macroglobulin and delivering alpha-2 macroglobulin into the cell via receptor-mediated endocytosis.


go_id: GO:0016966
term: nitric oxide reductase activity
ontology: MF
definition:
Catalysis of the reaction: H(2)O + 2 ferricytochrome c + nitrous oxide = 2 H(+) + 2 ferrocytochrome c + 2 nitric oxide.


go_id: GO:0016977
term: chitosanase activity
ontology: MF
definition:
Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.


go_id: GO:0016979
term: lipoate-protein ligase activity
ontology: MF
definition:
Catalysis of the lipoylation of a protein in two steps: ATP + (R)-lipoate + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP + diphosphate (overall reaction): (1) ATP + (R)-lipoate = lipoyl-AMP + diphosphate; (2) lipoyl-AMP + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP.


go_id: GO:0016984
term: ribulose-bisphosphate carboxylase activity
ontology: MF
definition:
Catalysis of the reaction: 2 (2R)-3-phosphoglycerate + 2 H+ = CO2 + D-ribulose 1,5-bisphosphate + H2O.


go_id: GO:0016985
term: mannan endo-1,4-beta-mannosidase activity
ontology: MF
definition:
Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.


go_id: GO:0016987
term: sigma factor activity
ontology: MF
definition:
Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.


go_id: GO:0016989
term: sigma factor antagonist activity
ontology: MF
definition:
The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.


go_id: GO:0016992
term: lipoate synthase activity
ontology: MF
definition:
Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl.


go_id: GO:0016998
term: cell wall macromolecule catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.


go_id: GO:0016999
term: antibiotic metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.


go_id: GO:0017000
term: antibiotic biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.


go_id: GO:0017001
term: antibiotic catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.


go_id: GO:0017002
term: activin receptor activity
ontology: MF
definition:
Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.


go_id: GO:0017004
term: cytochrome complex assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.


go_id: GO:0017005
term: 3'-tyrosyl-DNA phosphodiesterase activity
ontology: MF
definition:
Catalysis of the hydrolysis of 3'-phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between DNA topoisomerase I and DNA.


go_id: GO:0017015
term: regulation of transforming growth factor beta receptor signaling pathway
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway.


go_id: GO:0017017
term: MAP kinase tyrosine/serine/threonine phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate.


go_id: GO:0017022
term: myosin binding
ontology: MF
definition:
Binding to a myosin; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.


go_id: GO:0017023
term: myosin phosphatase complex
ontology: CC
definition:
An enzyme complex that catalyzes the removal of the phosphate group from phosphomyosin. Composed of a PP1 catalytic subunit (PP1c/PPP1CB) and a myosin phosphatase targeting subunit (MYPT1/PPP1R12A).


go_id: GO:0017024
term: myosin I binding
ontology: MF
definition:
Binding to a class I myosin; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments.


go_id: GO:0017025
term: TBP-class protein binding
ontology: MF
definition:
Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs).


go_id: GO:0017032
term: amino acid:potassium symporter activity
ontology: MF
definition:
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + K+(out) = amino acid(in) + K+(in).


go_id: GO:0017038
term: protein import
ontology: BP
definition:
The targeting and directed movement of proteins into a cell or organelle.  Not all import involves an initial targeting event.


go_id: GO:0017041
term: galactosylgalactosylglucosylceramidase activity
ontology: MF
definition:
Catalysis of the reaction: D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine + H2O = lactosyl-N-acylsphingosine + D-galactose.


go_id: GO:0017044
term: melanocyte-stimulating hormone activity
ontology: MF
definition:
The action characteristic of melanocyte-stimulating hormone, any of three peptide hormones that are produced by the intermediate lobe of the pituitary gland and, upon receptor binding, cause dispersal of melanosomes in melanophores of poikilothermic vertebrates.


go_id: GO:0017045
term: corticotropin-releasing hormone activity
ontology: MF
definition:
The action characteristic of corticotropin-releasing hormone (CRH), any of a number of peptides released by the mammalian hypothalamus into the hypophyseal-portal circulation in response to neural and/or chemical stimuli. Upon receptor binding, CRH increases the rate of corticotropin secretion by the anterior pituitary.


go_id: GO:0017051
term: retinol dehydratase activity
ontology: MF
definition:
Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + retinol = adenosine 3',5'-bisphosphate + anhydroretinol.


go_id: GO:0017054
term: negative cofactor 2 complex
ontology: CC
definition:
A heterodimeric protein complex that can stably associate with TATA-binding protein on promoters, thereby preventing the assembly of transcription factors TFIIA and TFIIB and leading to repression of RNA polymerase II transcription. The two subunits, NC2alpha (Drap1) and NC2beta (Dr1), dimerize through histone fold domains of the H2A/H2B type present in the amino termini.


go_id: GO:0017055
term: negative regulation of RNA polymerase II transcription preinitiation complex assembly
ontology: BP
definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.


go_id: GO:0017056
term: structural constituent of nuclear pore
ontology: MF
definition:
The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules.


go_id: GO:0017057
term: 6-phosphogluconolactonase activity
ontology: MF
definition:
Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H(2)O = 6-phospho-D-gluconate + H(+).


go_id: GO:0017058
term: FH1 domain binding
ontology: MF
definition:
Binding to a FH1 domain of a protein, a proline-rich domain, usually located in front of a FH2 domain.


go_id: GO:0017059
term: serine C-palmitoyltransferase complex
ontology: CC
definition:
An enzyme complex that catalyzes the transfer of a palmitoyl on to serine, forming 3-dehydro-D-sphinganine.


go_id: GO:0017060
term: 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-(1,3)-N-acetyl-D-glucosaminyl-R = GDP + beta-D-galactosyl-(1,3)-[alpha-L-fucosyl-(1,4)]-N-acetyl-D-glucosaminyl-R.


go_id: GO:0017061
term: S-methyl-5-thioadenosine phosphorylase activity
ontology: MF
definition:
Catalysis of the reaction: 5'-methylthioadenosine + phosphate = adenine + 5-methylthio-D-ribose 1-phosphate.


go_id: GO:0017062
term: respiratory chain complex III assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex, a transmembrane lipoprotein complex that it catalyzes the reduction of cytochrome c by accepting reducing equivalents from Coenzyme Q, by the aggregation, arrangement and bonding together of its constituents.


go_id: GO:0017065
term: single-strand selective uracil DNA N-glycosylase activity
ontology: MF
definition:
Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases present in single-stranded DNA.


go_id: GO:0017067
term: tyrosine-ester sulfotransferase activity
ontology: MF
definition:
Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H(+).


go_id: GO:0017071
term: intracellular cyclic nucleotide activated cation channel complex
ontology: CC
definition:
A protein complex that forms a transmembrane channel through which cations ions may pass in response to an intracellular cyclic nucleotide binding to the channel complex or one of its constituent parts.


go_id: GO:0017076
term: purine nucleotide binding
ontology: MF
definition:
Binding to a purine nucleotide, a compound consisting of a purine nucleoside esterified with (ortho)phosphate.


go_id: GO:0017077
term: oxidative phosphorylation uncoupler activity
ontology: MF
definition:
Enables the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis.


go_id: GO:0017083
term: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: GDP-beta-L-fucose + beta-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R = GDP + 1,4-beta-D-galactosyl-(1,4)-[alpha-L-fucosyl-(1,3)]-N-acetyl-D-glucosaminyl-R.


go_id: GO:0017084
term: delta1-pyrroline-5-carboxylate synthetase activity
ontology: MF
definition:
Catalysis of the reaction: L-glutamate + ATP + NADPH = ADP + L-glutamate gamma-semialdehyde + NADP+ + phosphate.


go_id: GO:0017085
term: response to insecticide
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects.


go_id: GO:0017086
term: 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) complex
ontology: CC
definition:
A protein complex that catalyzes the reaction 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)-dihydrolipoamide + carbon dioxide (CO2). This requires thiamine diphosphate; the enzyme also acts on (S)-3-methyl-2-oxopentanoate and 4-methyl-2-oxo-pentanoate.


go_id: GO:0017087
term: mitochondrial processing peptidase complex
ontology: CC
definition:
A protein complex consisting of a regulatory subunit (alpha-MPP) and a catalytic subunit (beta-MPP) that catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.


go_id: GO:0017089
term: glycolipid transfer activity
ontology: MF
definition:
Removes a glycolipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. A glycolipid is a compound usually containing 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid.


go_id: GO:0017090
term: meprin A complex
ontology: CC
definition:
A protein complex that is located in the cell membrane, and is involved in the metabolism of peptides, including neuropeptides. The complex has metalloendopeptidase activity that catalyzes the hydrolysis of protein and peptide substrates, preferentially on carboxyl side of hydrophobic residues.


go_id: GO:0017095
term: heparan sulfate 6-O-sulfotransferase activity
ontology: MF
definition:
Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 6-O-sulfate; results in 6-O-sulfation of glucosamine residues in heparan sulfate.


go_id: GO:0017096
term: acetylserotonin O-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin. Melatonin is also known as N-acetyl-5-methoxytryptamine.


go_id: GO:0017098
term: sulfonylurea receptor binding
ontology: MF
definition:
Binding to a sulfonylurea receptor, a regulatory subunit of the ATP-sensitive potassium ion channel.


go_id: GO:0017099
term: very-long-chain-acyl-CoA dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a very-long-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A very long-chain fatty acid is a fatty acid which has a chain length greater than C22.


go_id: GO:0017101
term: aminoacyl-tRNA synthetase multienzyme complex
ontology: CC
definition:
A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates.


go_id: GO:0017102
term: methionyl glutamyl tRNA synthetase complex
ontology: CC
definition:
A complex consisting of methionyl- and glutamyl-tRNA synthetases. The tRNA synthetases present in the complex bind to their cognate tRNAs more efficiently than they do as monomers.


go_id: GO:0017105
term: acyl-CoA delta11-desaturase activity
ontology: MF
definition:
Catalysis of the reaction: acyl-CoA + reduced acceptor + O2 = delta11-acyl-CoA + acceptor + 2 H2O. The enzyme introduces a cis double bond at position C-11 of saturated fatty acyl-CoAs.


go_id: GO:0017108
term: 5'-flap endonuclease activity
ontology: MF
definition:
Catalysis of the cleavage of a 5' flap structure in DNA, but not other DNA structures; processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis.


go_id: GO:0017110
term: nucleoside diphosphate phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate  + phosphate.


go_id: GO:0017111
term: ribonucleoside triphosphate phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: a ribonucleoside triphosphate + H2O = a ribonucleoside diphosphate + H+ + phosphate.


go_id: GO:0017116
term: single-stranded DNA helicase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix.


go_id: GO:0017118
term: lipoyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.


go_id: GO:0017119
term: Golgi transport complex
ontology: CC
definition:
A  multisubunit tethering complex of the CATCHR family (complexes associated with tethering containing helical rods) that has a role in tethering vesicles to the Golgi prior to fusion. Composed of 8 subunits COG1-8.


go_id: GO:0017121
term: plasma membrane phospholipid scrambling
ontology: BP
definition:
The movement of a population of phospholipid molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet, resulting in loss of lipid asymmetry and surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE).


go_id: GO:0017122
term: protein N-acetylglucosaminyltransferase complex
ontology: CC
definition:
A protein complex capable of protein N-acetylglucosaminyltransferase activity, the addition of nucleotide-activated sugars onto the polypeptide according to reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein. The complex has different compositions in different species: In mammals it is often a homotrimer, in bacteria a heterotetramer of 2 different subunits.


go_id: GO:0017124
term: SH3 domain binding
ontology: MF
definition:
Binding to a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins.


go_id: GO:0017126
term: nucleologenesis
ontology: BP
definition:
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells.


go_id: GO:0017128
term: phospholipid scramblase activity
ontology: MF
definition:
Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, by an ATP-independent mechanism.


go_id: GO:0017131
term: uridine-rich cytoplasmic polyadenylylation element binding
ontology: MF
definition:
Binding to a U-rich sequence in the 3'-end of nuclear-transcribed mRNAs; required for cytoplasmic polyadenylylation.


go_id: GO:0017133
term: mitochondrial electron transfer flavoprotein complex
ontology: CC
definition:
A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system.


go_id: GO:0017136
term: NAD-dependent histone deacetylase activity
ontology: MF
definition:
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from a histone.


go_id: GO:0017145
term: stem cell division
ontology: BP
definition:
The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.


go_id: GO:0017146
term: NMDA selective glutamate receptor complex
ontology: CC
definition:
An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD.


go_id: GO:0017148
term: negative regulation of translation
ontology: BP
definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.


go_id: GO:0017153
term: sodium:dicarboxylate symporter activity
ontology: MF
definition:
Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in).


go_id: GO:0017154
term: semaphorin receptor activity
ontology: MF
definition:
Combining with a semaphorin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


go_id: GO:0017156
term: calcium-ion regulated exocytosis
ontology: BP
definition:
The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, induced by a rise in cytosolic calcium-ion levels.


go_id: GO:0017161
term: inositol-1,3,4-trisphosphate 4-phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 1,3-bisphosphate + phosphate.


go_id: GO:0017166
term: vinculin binding
ontology: MF
definition:
Binding to vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.


go_id: GO:0017168
term: 5-oxoprolinase (ATP-hydrolyzing) activity
ontology: MF
definition:
Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H(2)O = L-glutamate + ADP + 2 H(+) + phosphate.


go_id: GO:0017171
term: serine hydrolase activity
ontology: MF
definition:
Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).


go_id: GO:0017174
term: glycine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine.


go_id: GO:0017176
term: phosphatidylinositol N-acetylglucosaminyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol.


go_id: GO:0017177
term: glucosidase II complex
ontology: CC
definition:
A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins.


go_id: GO:0017180
term: peptidyl-diphthine biosynthetic process from peptidyl-histidine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of peptidyl-diphthine from other compounds, including peptidyl-histidine.


go_id: GO:0017181
term: peptidyl-diphthine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthine, a modified histidine residue.


go_id: GO:0017183
term: peptidyl-diphthamide biosynthetic process from peptidyl-histidine
ontology: BP
definition:
The modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor EF-2. The process occurs in eukaryotes and archaea but not eubacteria.


go_id: GO:0017184
term: peptidyl-diphthamide catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.


go_id: GO:0017186
term: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of peptidyl-pyroglutamic acid, catalyzed by glutaminyl-peptide cyclotransferase.


go_id: GO:0017187
term: peptidyl-glutamic acid carboxylation
ontology: BP
definition:
The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.


go_id: GO:0017189
term: N-terminal peptidyl-alanine acetylation
ontology: BP
definition:
The acetylation of the N-terminal alanine of proteins; catalyzed by peptide alpha-N-acetyltransferase or other enzymes of this class, such as ribosomal-protein-alanine N-acetyltransferase.


go_id: GO:0017190
term: N-terminal peptidyl-aspartic acid acetylation
ontology: BP
definition:
The acetylation of the N-terminal aspartic acid of proteins; catalyzed by aspartate N-acetyltransferase.


go_id: GO:0017192
term: N-terminal peptidyl-glutamine acetylation
ontology: BP
definition:
The acetylation of a glutamine residue in protein to form the N5-methyl-L-glutamine derivative. The occurrence of this modification has not been confirmed. Its annotation in sequence databases is either due to the misidentification of 2-pyrrolidone-5-carboxylic acid, or to inappropriate homolog comparisons when proteolytic modification is more probable.


go_id: GO:0017194
term: N-terminal peptidyl-isoleucine acetylation
ontology: BP
definition:
The acetylation of the N-terminal isoleucine of proteins to form the derivative N-acetyl-L-isoleucine. The occurrence of this modification has not been confirmed.


go_id: GO:0017195
term: N-terminal peptidyl-lysine N2-acetylation
ontology: BP
definition:
The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.


go_id: GO:0017196
term: N-terminal peptidyl-methionine acetylation
ontology: BP
definition:
The acetylation of the N-terminal methionine of proteins to form the derivative N-acetyl-L-methionine.


go_id: GO:0017199
term: N-terminal peptidyl-threonine acetylation
ontology: BP
definition:
The acetylation of the N-terminal threonine of proteins to form the derivative N-acetyl-L-threonine; catalyzed by peptide alpha-N-acetyltransferase.


go_id: GO:0018002
term: N-terminal peptidyl-glutamic acid acetylation
ontology: BP
definition:
The acetylation of the N-terminal glutamic acid of proteins to form the derivate acetyl-glutamic acid.


go_id: GO:0018003
term: peptidyl-lysine N6-acetylation
ontology: BP
definition:
The acetylation of the peptidyl-lysine of proteins to form the derivative peptidyl-N6-acetyl-L-lysine.


go_id: GO:0018007
term: N-terminal peptidyl-glycine N-glucuronylation
ontology: BP
definition:
The glucuronylation of the N-terminal glycine of proteins to form the derivative D-glucuronyl-N-glycine.


go_id: GO:0018008
term: N-terminal peptidyl-glycine N-myristoylation
ontology: BP
definition:
The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine.


go_id: GO:0018009
term: N-terminal peptidyl-L-cysteine N-palmitoylation
ontology: BP
definition:
The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal cysteine residue to form N-palmitoyl-L-cysteine.


go_id: GO:0018012
term: N-terminal peptidyl-alanine trimethylation
ontology: BP
definition:
The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.


go_id: GO:0018014
term: N-terminal peptidyl-methionine methylation
ontology: BP
definition:
The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.


go_id: GO:0018015
term: N-terminal peptidyl-phenylalanine methylation
ontology: BP
definition:
The methylation of the N-terminal phenylalanine of proteins to form the derivative N-methyl-L-phenylalanine.


go_id: GO:0018016
term: N-terminal peptidyl-proline dimethylation
ontology: BP
definition:
The methylation of the N-terminal proline of proteins to form the derivative N,N-dimethyl-L-proline.


go_id: GO:0018019
term: N-terminal peptidyl-glutamine methylation
ontology: BP
definition:
The methylation of a glutamine residue in proteins to form the peptidyl-N5-methyl-L-glutamine derivative.


go_id: GO:0018021
term: peptidyl-histidine methylation
ontology: BP
definition:
The methylation of peptidyl-L-histidine to form peptidyl-L-1'-methyl-L-histidine (otherwise known as tau-methylhistidine, tele-methylhistidine) or peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).


go_id: GO:0018024
term: histone-lysine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.


go_id: GO:0018025
term: calmodulin-lysine N-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + calmodulin L-lysine = S-adenosyl-L-homocysteine + calmodulin N6-methyl-L-lysine.


go_id: GO:0018030
term: peptidyl-lysine N6-myristoyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.


go_id: GO:0018031
term: peptidyl-lysine N6-palmitoyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a palmitoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.


go_id: GO:0018057
term: peptidyl-lysine oxidation
ontology: BP
definition:
The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens.


go_id: GO:0018058
term: N-terminal protein amino acid deamination, from amino carbon
ontology: BP
definition:
The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.


go_id: GO:0018059
term: N-terminal peptidyl-serine deamination
ontology: BP
definition:
The oxidative deamination of N-terminal peptidyl-serine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.


go_id: GO:0018060
term: N-terminal peptidyl-cysteine deamination
ontology: BP
definition:
The oxidative deamination of N-terminal peptidyl-cysteine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.


go_id: GO:0018061
term: peptidyl-L-3-phenyllactic acid biosynthetic process from peptidyl-phenylalanine
ontology: BP
definition:
The modification of a N-terminal peptidyl-phenylalanine residue by either oxidative deamination or by transamination and subsequent reduction to form peptidyl-L-3-phenyllactic acid.


go_id: GO:0018062
term: peptidyl-tryptophan succinylation
ontology: BP
definition:
The modification of an N-terminal peptidyl-tryptophan residue to form peptidyl-N2-succinyl-L-tryptophan.


go_id: GO:0018064
term: protein-L-histidine N-tele-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: L-histidyl-[protein] + S-adenosyl-L-methionine = N(tele)-methyl-L-histidyl-[protein] + S-adenosyl-L-homocysteine.


go_id: GO:0018068
term: peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine
ontology: BP
definition:
The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.


go_id: GO:0018069
term: peptide cross-linking via 4'-(L-tryptophan)-L-tryptophyl quinone
ontology: BP
definition:
The cross-linking of a tryptophan residue to tryptophyl quinone to form 4'-(L-tryptophan)-L-tryptophyl quinone, a cofactor found at the active site of methylamine dehydrogenase.


go_id: GO:0018072
ontology: BP
term:
peptidyl-L-glutamyl 5-glycerylphosphorylethanolamine biosynthetic process from peptidyl-glutamic acid

definition:
The modification of peptidyl-glutamic acid residues by the covalent attachment of ethanolamine, itself further modified by the addition of a phosphoglycerol unit.


go_id: GO:0018081
term: peptide cross-linking via lanthionine or 3-methyl-lanthionine
ontology: BP
definition:
The synthesis of (2R,6R)-lanthionine, sn-(2S,6R)-lanthionine or (2S,3S,6R)-3-methyl-lanthionine, forming an intra-polypeptide cross-link between peptidyl-cysteine, and peptidyl-serine or peptidyl-threonine; dehydration of the serine or threonine residue to the alpha,beta-unsaturated amino acid is the first step; a bond then forms between the ethylene (ethene) group thus formed and the sulfur atom of a cysteine, with the inversion of the configuration of the alpha carbon of the serine or threonine occurring during the process.


go_id: GO:0018083
term: peptidyl-L-3-oxoalanine biosynthetic process from peptidyl-cysteine or peptidyl-serine
ontology: BP
definition:
The modification of peptidyl-cysteine or peptidyl-serine to peptidyl-L-3-oxoalanine; characteristic of the active sites of arylsulfatases.


go_id: GO:0018095
term: protein polyglutamylation
ontology: BP
definition:
The addition of one or more alpha-linked glutamyl units to the gamma carboxyl group of peptidyl-glutamic acid.


go_id: GO:0018096
term: peptide cross-linking via S-(2-aminovinyl)-D-cysteine
ontology: BP
definition:
The synthesis of (S,Z)-S-(2-aminovinyl)cysteine forming an intra-polypeptide cross-link between serine and cysteine.


go_id: GO:0018103
term: protein C-linked glycosylation
ontology: BP
definition:
A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via a C atom.


go_id: GO:0018106
term: peptidyl-histidine phosphorylation
ontology: BP
definition:
The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).


go_id: GO:0018110
term: histone arginine kinase activity
ontology: MF
definition:
Catalysis of the reaction: histone L-arginine + ATP = histone N(omega)-phospho-L-arginine + ADP + 2 H(+).


go_id: GO:0018118
term: peptidyl-L-cysteine glutathione disulfide biosynthetic process from peptidyl-cysteine
ontology: BP
definition:
The modification of peptidyl-cysteine by covalent addition of glutathione to form peptidyl-L-cysteine glutathione disulfide.


go_id: GO:0018119
term: peptidyl-cysteine S-nitrosylation
ontology: BP
definition:
The covalent addition of a nitric oxide (NO) group to the sulphur (S) atom of a cysteine residue in a protein, to form peptidyl-S-nitrosyl-L-cysteine.


go_id: GO:0018120
term: peptidyl-arginine ADP-ribosylation
ontology: BP
definition:
The transfer, from NAD, of ADP-ribose to peptidyl-arginine to form omega-N-(ADP-ribosyl)-L-arginine.


go_id: GO:0018122
term: peptidyl-asparagine ADP-ribosylation
ontology: BP
definition:
The transfer, from NAD, of ADP-ribose to peptidyl-asparagine to form peptidyl-N4-(ADP-ribosyl)-L-asparagine.


go_id: GO:0018123
term: peptidyl-cysteine ADP-ribosylation
ontology: BP
definition:
The transfer, from NAD, of ADP-ribose to peptidyl-cysteine to form peptidyl-S-(ADP-ribosyl)-L-cysteine.


go_id: GO:0018124
term: peptide cross-linking via 5'-(N6-L-lysine)-L-topaquinone
ontology: BP
definition:
The cross-linking of the epsilon-amino group of a peptidyl-lysine with peptidyl-topaquinone, a modified tyrosine residue.


go_id: GO:0018130
term: heterocycle biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).


go_id: GO:0018131
term: oxazole or thiazole biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.


go_id: GO:0018132
term: peptide cross-linking via L-cysteine oxazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018133
term: peptide cross-linking via L-cysteine oxazolinecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue.


go_id: GO:0018134
term: peptide cross-linking via glycine oxazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018137
term: peptide cross-linking via glycine thiazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018138
term: peptide cross-linking via L-serine thiazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018139
term: peptide cross-linking via L-phenylalanine thiazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl phenylalanine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018140
term: peptide cross-linking via L-cysteine thiazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl cysteine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018141
term: peptide cross-linking via L-lysine thiazolecarboxylic acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018145
term: protein-DNA covalent cross-linking via peptidyl-serine
ontology: BP
definition:
The formation of a covalent cross-link between DNA and a peptidyl-serine residue by the formation of O-(phospho-5'-DNA)-L-serine.


go_id: GO:0018146
term: keratan sulfate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.


go_id: GO:0018147
term: molybdenum incorporation via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide)
ontology: BP
definition:
The incorporation of molybdenum into a protein via L-selenocysteinyl molybdenum bis(molybdopterin guanine dinucleotide).


go_id: GO:0018148
term: RNA-protein covalent cross-linking via peptidyl-tyrosine
ontology: BP
definition:
The formation of a covalent cross-link between RNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-RNA)-L-tyrosine.


go_id: GO:0018150
term: peptide cross-linking via 3-(3'-L-histidyl)-L-tyrosine
ontology: BP
definition:
The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3-(3'-L-histidyl)-L-tyrosine protein cross-link.


go_id: GO:0018152
term: peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine
ontology: BP
definition:
The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.


go_id: GO:0018153
term: isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine
ontology: BP
definition:
The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glutamine to produce N6-(L-isoglutamyl)-L-lysine.


go_id: GO:0018154
term: peptide cross-linking via (2R,6R)-lanthionine
ontology: BP
definition:
The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of (2R,6R)-lanthionine (L-lanthionine).


go_id: GO:0018155
term: peptide cross-linking via sn-(2S,6R)-lanthionine
ontology: BP
definition:
The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of sn-(2S,6R)-lanthionine (meso-lanthione).


go_id: GO:0018156
term: peptide cross-linking via (2S,3S,6R)-3-methyl-lanthionine
ontology: BP
definition:
The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,6R)-3-methyl-lanthionine (3-methyl-L-lanthionine).


go_id: GO:0018157
term: peptide cross-linking via an oxazole or thiazole
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine, or peptidyl cysteine-peptidyl glycine cross-link by the condensation of the serine hydroxyl or cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.


go_id: GO:0018160
term: peptidyl-pyrromethane cofactor linkage
ontology: BP
definition:
The covalent binding of a pyrromethane (dipyrrin) cofactor to protein via the sulfur atom of cysteine forming dipyrrolylmethanemethyl-L-cysteine.


go_id: GO:0018161
term: dipyrrin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.


go_id: GO:0018162
term: peptide cross-linking via S-(2-aminovinyl)-3-methyl-D-cysteine
ontology: BP
definition:
The formation of a cross-link between peptidyl-cysteine and peptidyl-threonine via the formation of S-(2-aminovinyl)-3-methyl-D-cysteine.


go_id: GO:0018163
term: protein-DNA covalent cross-linking via the 5'-end to peptidyl-tyrosine
ontology: BP
definition:
The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-DNA)-L-tyrosine.


go_id: GO:0018164
term: protein-DNA covalent cross-linking via peptidyl-threonine
ontology: BP
definition:
The formation of a covalent cross-link between DNA and a peptidyl-threonine residue by the formation of O-(phospho-5'-DNA)-L-threonine.


go_id: GO:0018165
term: peptidyl-tyrosine uridylylation
ontology: BP
definition:
The uridylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-uridine)-L-tyrosine, found in glutamine synthetase.


go_id: GO:0018167
term: protein-phycoerythrobilin linkage via phycoerythrobilin-bis-L-cysteine
ontology: BP
definition:
The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine.


go_id: GO:0018168
term: protein-phycoerythrobilin linkage via S-phycoerythrobilin-L-cysteine
ontology: BP
definition:
The linkage of the chromophore phycoerythrobilin to phycoerythrocyanin via S-phycoerythrobilin-L-cysteine.


go_id: GO:0018169
term: ribosomal S6-glutamic acid ligase activity
ontology: MF
definition:
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.


go_id: GO:0018171
term: peptidyl-cysteine oxidation
ontology: BP
definition:
The oxidation of peptidyl-cysteine to peptidyl-L-cysteine sulfinic acid or peptidyl-L-cysteine sulfenic acid.


go_id: GO:0018173
term: peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of peptidyl-1-thioglycine from other compounds, including peptidyl-glycine.


go_id: GO:0018181
term: peptidyl-arginine C5-methylation
ontology: BP
definition:
The methylation of peptidyl-arginine on the carbon 5 (C5) residue to form peptidyl-5-methyl-L-arginine.


go_id: GO:0018182
term: protein-heme linkage via 3'-L-histidine
ontology: BP
definition:
The covalent linkage of heme and a protein via 3'-L-histidine (otherwise known as pi-heme-histidine, pros-heme-histidine).


go_id: GO:0018185
term: poly-N-methyl-propylamination
ontology: BP
definition:
The modification of peptidyl-lysine by the addition of an N6-propylamino and of propylmethylamino units, forming N6-(propylamino-poly(propylmethylamino)-propyldimethylamine)-L-lysine, typical of the silicate binding protein silaffin.


go_id: GO:0018189
term: pyrroloquinoline quinone biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of the cofactor pyrroloquinoline quinone (PQQ); it is synthesized from a small peptide containing tyrosine and glutamic acid; these amino acids in the peptide are multiply cross-linked and the rest of the peptide is removed.


go_id: GO:0018191
term: peptidyl-serine octanoylation
ontology: BP
definition:
The octanoylation of peptidyl-serine to form peptidyl-O3-octanoyl-L-serine, typical of the protein ghrelin.


go_id: GO:0018220
term: peptidyl-threonine palmitoylation
ontology: BP
definition:
The covalent attachment of a palmitoyl group to an oxygen (O) atom in a threonine residue to form peptidyl-O-palmitoyl-L-threonine.


go_id: GO:0018221
term: peptidyl-serine palmitoylation
ontology: BP
definition:
The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.


go_id: GO:0018226
term: peptidyl-S-farnesyl-L-cysteine biosynthetic process from peptidyl-cysteine
ontology: BP
definition:
The modification of peptidyl-cysteine to form peptidyl-S-farnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine; the residue may be found at the first position in the sequence motif C-X-X-(SAQCMT)* where the second and third positions are usually aliphatic.


go_id: GO:0018227
term: peptidyl-S-12-hydroxyfarnesyl-L-cysteine biosynthetic process from peptidyl-cysteine
ontology: BP
definition:
The modification of peptidyl-cysteine to form S-12-hydroxyfarnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine.


go_id: GO:0018228
term: peptidyl-S-geranylgeranyl-L-cysteine biosynthetic process from peptidyl-cysteine
ontology: BP
definition:
The modification of peptidyl-cysteine to form peptidyl-S-geranylgeranylcysteine; formation of S-geranylgeranyl-L-cysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CAAX motif and methyl esterification of the geranylgeranylated cysteine; methyl esterification but not cleavage occurs for the CXC motif. For the type II geranylgeranyltransferase the residue may be found at the first and final positions in the sequence motif C-X-C* or at the final position in the sequence motif C-C*. These motifs are necessary but not sufficient for modification.


go_id: GO:0018230
term: peptidyl-L-cysteine S-palmitoylation
ontology: BP
definition:
The covalent attachment of a palmitoyl group to a sulfur (S) atom within a cysteine residue to form peptidyl-S-palmitoyl-L-cysteine.


go_id: GO:0018231
term: peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine
ontology: BP
definition:
The modification of peptidyl-cysteine to form peptidyl-S-diacylglycerol-L-cysteine; the oleate and palmitate actually represent mixtures of saturated (generally at 3') and unsaturated (generally at 2') fatty acids.


go_id: GO:0018232
term: peptide cross-linking via S-(L-isoglutamyl)-L-cysteine
ontology: BP
definition:
The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.


go_id: GO:0018233
term: peptide cross-linking via 2'-(S-L-cysteinyl)-L-histidine
ontology: BP
definition:
The modification of peptidyl-histidine and peptidyl-cysteine to form a 2'-(S-L-cysteinyl)-L-histidine protein cross-link.


go_id: GO:0018234
term: peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine
ontology: BP
definition:
The thioether cross-linking of a cysteine residue to a tyrosine residue to form 3'-(S-L-cysteinyl)-L-tyrosine, found in galactose oxidase.


go_id: GO:0018240
term: protein S-linked glycosylation via cysteine
ontology: BP
definition:
The glycosylation of protein via the sulfur atom of peptidyl-cysteine, forming S-glycosyl-L-cysteine.


go_id: GO:0018241
term: protein O-linked glycosylation via hydroxylysine
ontology: BP
definition:
The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.


go_id: GO:0018242
term: protein O-linked glycosylation via serine
ontology: BP
definition:
The glycosylation of protein via the O3 atom of peptidyl-serine, forming O3-glycosyl-L-serine; the most common forms are N-acetylgalactosaminyl, mannosyl, galactosyl, and xylosyl serine.


go_id: GO:0018243
term: protein O-linked glycosylation via threonine
ontology: BP
definition:
The glycosylation of protein via the O3 atom of peptidyl-threonine, forming O3-glycosyl-L-threonine; the most common forms are N-acetylgalactosaminyl, mannosyl, and galactosyl threonine.


go_id: GO:0018244
term: protein N-linked glycosylation via tryptophan
ontology: BP
definition:
The glycosylation of protein via peptidyl-tryptophan, 1'-glycosyl-L-tryptophan; results in the formation of an (S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid residue.


go_id: GO:0018245
term: protein O-linked glycosylation via tyrosine
ontology: BP
definition:
The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.


go_id: GO:0018247
term: protein-phosphoribosyl dephospho-coenzyme A linkage
ontology: BP
definition:
The linkage of phosphoribosyl dephospho-coenzyme A to protein via peptidyl-serine, to form O-(phosphoribosyl dephospho-coenzyme A)-L-serine; it is uncertain whether the phosphoribosyl glycosidic attachment to the dephospho-coenzyme A is alpha or beta, and through the 2' or the 3' position.


go_id: GO:0018250
term: peptidyl-dehydroalanine biosynthetic process from peptidyl-tyrosine or peptidyl-serine
ontology: BP
definition:
The formation of peptidyl-dehydroalanine from either peptidyl-tyrosine by phenyl transfer, or from peptidyl-serine, which is coupled with the formation of 5-imidazolinone by the two neighboring residues, produces an 4-methylidene-imidazole-5-one active site of some amino acid ammonia-lyases; the 4-methylidene-imidazole-5-one, is formed autocatalytically by cyclization and dehydration of the sequence ASG.


go_id: GO:0018251
term: peptidyl-tyrosine dehydrogenation
ontology: BP
definition:
The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.


go_id: GO:0018253
term: peptide cross-linking via 5-imidazolinone glycine
ontology: BP
definition:
The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue n, an alanine, serine or cysteine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with an oxidation of residue n+1 to form an active aldehyde.


go_id: GO:0018255
term: peptide cross-linking via S-glycyl-L-cysteine
ontology: BP
definition:
The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.


go_id: GO:0018258
term: protein O-linked glycosylation via hydroxyproline
ontology: BP
definition:
The glycosylation of proteins via 04 atom of hydroxyproline to form O4-glycosyl-L-hydroxyproline; the most common form is arabinofuranosyl-4-proline.


go_id: GO:0018259
term: RNA-protein covalent cross-linking via peptidyl-serine
ontology: BP
definition:
The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.


go_id: GO:0018262
term: isopeptide cross-linking
ontology: BP
definition:
The formation of a covalent cross-link between or within peptide chains, where either the amino group or the carboxyl group, or both, are not attached to the alpha carbon.


go_id: GO:0018263
term: isopeptide cross-linking via N-(L-isoaspartyl)-L-cysteine
ontology: BP
definition:
The formation of an isopeptide cross-link between peptidyl-asparagine and peptidyl-cysteine to produce N-(L-isoaspartyl)-L-cysteine.


go_id: GO:0018264
term: isopeptide cross-linking via N-(L-isoaspartyl)-glycine
ontology: BP
definition:
The formation of an isopeptide cross-link between peptidyl-asparagine and peptidyl-glycine to produce N-(L-isoaspartyl)-glycine.


go_id: GO:0018265
term: GPI anchor biosynthetic process via N-asparaginyl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-asparagine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a asparaginyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018266
term: GPI anchor biosynthetic process via N-aspartyl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-aspartic acid ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a aspartyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018267
term: GPI anchor biosynthetic process via N-cysteinyl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-cysteine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a cysteinyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018268
term: GPI anchor biosynthetic process via N-glycyl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a glycyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018269
term: GPI anchor biosynthetic process via N-seryl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018270
term: GPI anchor biosynthetic process via N-alanyl-glycosylphosphatidylinositolethanolamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-alanine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of an alanyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018274
term: peptide cross-linking via L-lysinoalanine
ontology: BP
definition:
The modification of peptidyl-lysine and peptidyl-serine to form a (2Xi,9S)-L-lysinoalanine cross-link.


go_id: GO:0018276
term: isopeptide cross-linking via N6-glycyl-L-lysine
ontology: BP
definition:
The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glycine to produce N6-glycyl-L-lysine. This is distinct from the formation of the thiolester intermediate, which occurs during ubiquitination.


go_id: GO:0018279
term: protein N-linked glycosylation via asparagine
ontology: BP
definition:
The glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine and N4 glucosyl asparagine also occur. This modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification.


go_id: GO:0018280
term: protein S-linked glycosylation
ontology: BP
definition:
A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via a sulfur atom of a peptidyl-amino-acid such as cysteine or methionine.


go_id: GO:0018281
term: GSI anchor biosynthetic process via N-seryl-glycosylsphingolipidinositolethanolamine
ontology: BP
definition:
The formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


go_id: GO:0018282
term: metal incorporation into metallo-sulfur cluster
ontology: BP
definition:
The formation of a cluster of several metal atoms, including iron, nickel, molybdenum, vanadium, or copper, with one or more bridging (mu-bond) sulfur atoms; amino acids residues in proteins that may ligate the metal sulfur cluster are cysteine, histidine, aspartate, glutamate, serine and cysteine persulfide.


go_id: GO:0018284
term: iron incorporation into protein via tetrakis-L-cysteinyl iron
ontology: BP
definition:
The incorporation of iron into a protein via tetrakis-L-cysteinyl iron (there is no exogenous sulfur, so this modification by itself does not produce an iron-sulfur protein).


go_id: GO:0018285
term: iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide
ontology: BP
definition:
The incorporation of iron into a 2Fe-2S iron-sulfur cluster via tetrakis-L-cysteinyl diiron disulfide.


go_id: GO:0018287
term: iron incorporation into iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide
ontology: BP
definition:
The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide.


go_id: GO:0018288
term: iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl tetrairon tetrasulfide
ontology: BP
definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tetrakis-L-cysteinyl tetrairon tetrasulfide.


go_id: GO:0018290
ontology: BP
term:
iron and molybdenum incorporation into iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide

definition:
The incorporation of iron and molybdenum into a Mo-7Fe-8S iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide, found in nitrogenase.


go_id: GO:0018299
ontology: BP
term:
iron incorporation into the Rieske iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide

definition:
The incorporation of iron into a Rieske 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl bis-L-histidino diiron disulfide.


go_id: GO:0018301
ontology: BP
term:
iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon

definition:
The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.


go_id: GO:0018302
ontology: BP
term:
iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide

definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide.


go_id: GO:0018303
ontology: BP
term:
iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide

definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.


go_id: GO:0018304
term: iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide
ontology: BP
definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide.


go_id: GO:0018305
term: iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-serinyl tetrairon tetrasulfide
ontology: BP
definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-serinyl tetrairon tetrasulfide.


go_id: GO:0018306
ontology: BP
term:
iron incorporation into iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide

definition:
The incorporation of iron into a 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide.


go_id: GO:0018311
term: peptidyl-N4-hydroxymethyl-L-asparagine biosynthetic process from peptidyl-asparagine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of N4-hydroxymethyl-L-asparagine from other compounds, including peptidyl-asparagine.


go_id: GO:0018313
term: peptide cross-linking via L-alanyl-5-imidazolinone glycine
ontology: BP
definition:
The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue N, an alanine, to the alpha-amino nitrogen of residue N+2, a glycine, coupled with the formation of a double bond to the alpha-amino nitrogen of residue N+1 which loses one hydrogen, and the loss of a molecule of water.


go_id: GO:0018316
term: peptide cross-linking via L-cystine
ontology: BP
definition:
The oxidation of two peptidyl-cysteine residues to form a peptidyl-L-cystine (dicysteine) in which segments of peptide chain are linked by a disulfide bond; the cross-link may be between different or the same peptide chain.


go_id: GO:0018321
term: protein glucuronylation
ontology: BP
definition:
The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.


go_id: GO:0018335
term: protein succinylation
ontology: BP
definition:
The modification of a protein by the addition of a succinyl group (CO-CH2-CH2-CO) to an amino acid residue.


go_id: GO:0018339
term: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
ontology: BP
definition:
The modification of peptidyl-aspartic acid to form peptidyl-L-beta-methylthioaspartic acid, typical of bacterial ribosomal protein S12.


go_id: GO:0018342
term: protein prenylation
ontology: BP
definition:
The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.


go_id: GO:0018353
term: protein-phycocyanobilin linkage via S-phycocyanobilin-L-cysteine
ontology: BP
definition:
The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin via S-phycocyanobilin-L-cysteine.


go_id: GO:0018355
ontology: BP
term:
protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine

definition:
The formation of a protein-phosphoribosyl dephospho-coenzyme A linkage via O-(phosphoribosyl dephospho-coenzyme A)-L-serine.


go_id: GO:0018356
term: protein-phycobiliviolin linkage via S-phycobiliviolin-L-cysteine
ontology: BP
definition:
The linkage of the chromophore phycobiliviolin to phycoerythrocyanin via S-phycobiliviolin-L-cysteine.


go_id: GO:0018358
term: protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine
ontology: BP
definition:
The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.


go_id: GO:0018363
term: peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium
ontology: BP
definition:
The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester-L-methionine sulfonium.


go_id: GO:0018366
term: chiral amino acid racemization
ontology: BP
definition:
The formation of a mixture of the two possible enantiomers from the D- or L-enantiomer of a chiral amino acid.


go_id: GO:0018376
term: peptidyl-asparagine hydroxylation to form L-erythro-beta-hydroxyasparagine
ontology: BP
definition:
The hydroxylation of peptidyl-asparagine to form peptidyl-L-erythro-beta-hydroxyasparagine; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).


go_id: GO:0018386
term: N-terminal peptidyl-cysteine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-cysteine
ontology: BP
definition:
The condensation of pyruvate through the 2-oxo group with the N-terminal cysteine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-cysteine.


go_id: GO:0018387
term: N-terminal peptidyl-amino acid deamination to pyruvic acid
ontology: BP
definition:
The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.


go_id: GO:0018388
term: N-terminal peptidyl-valine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-valine
ontology: BP
definition:
The condensation of pyruvate through the 2-oxo group with the N-terminal valine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-valine.


go_id: GO:0018390
ontology: BP
term:
peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine

definition:
The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.


go_id: GO:0018392
term: glycoprotein 3-alpha-L-fucosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H(+).


go_id: GO:0018400
term: peptidyl-proline hydroxylation to 3-hydroxy-L-proline
ontology: BP
definition:
The modification of peptidyl-proline to form 3-hydroxy-L-proline; catalyzed by procollagen-proline 3-dioxygenase.


go_id: GO:0018401
term: peptidyl-proline hydroxylation to 4-hydroxy-L-proline
ontology: BP
definition:
The modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase.


go_id: GO:0018402
ontology: BP
term:
protein-chondroitin sulfate linkage via chondroitin sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine

definition:
Chondroitin sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.


go_id: GO:0018403
ontology: BP
term:
protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine

definition:
Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.


go_id: GO:0018404
ontology: BP
term:
protein-heparan sulfate linkage via heparan sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine

definition:
Heparan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.


go_id: GO:0018405
ontology: BP
term:
protein-keratan sulfate linkage via keratan sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine

definition:
Keratan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and threonine residues.


go_id: GO:0018406
term: protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
ontology: BP
definition:
The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring.


go_id: GO:0018415
ontology: BP
term:
iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide

definition:
The incorporation of iron into a 3Fe-2S cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.


go_id: GO:0018416
ontology: BP
term:
nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide

definition:
The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.


go_id: GO:0018417
ontology: BP
term:
iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide

definition:
The incorporation of iron into a 3Fe-2S cluster by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.


go_id: GO:0018418
ontology: BP
term:
nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide

definition:
The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.


go_id: GO:0018419
term: protein catenane formation
ontology: BP
definition:
The aggregation, arrangement and bonding together of a protein structure comprising two or more rings that are interlocked but not covalently joined; resembling the links of a chain.


go_id: GO:0018423
term: protein C-terminal leucine carboxyl O-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + protein L-leucine = S-adenosyl-L-homocysteine + protein L-leucine methyl ester. This modification occurs only at the oxygen atoms of the free alpha carboxyl group of a leucine residue at the C-terminus of the protein.


go_id: GO:0018424
term: peptidyl-glutamic acid poly-ADP-ribosylation
ontology: BP
definition:
This modification produces peptidyl-glutamic acid poly-ADP-ribose found in a number of nuclear proteins under certain conditions including the repair of single strand DNA breaks. The activated form of the generating enzyme poly(ADP-ribose) polymerase is itself modified in this way.


go_id: GO:0018425
term: O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of O3-(N-acetylglucosamine-1-phosphoryl)-L-serine. The recovery of O-phosphorylserine from acid hydrolysates suggests N-acetylglucosamine-1-phosphate residues are esterified to peptidyl serines through phosphoester bonds.


go_id: GO:0018426
term: O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine. The polypeptide backbones of glycoproteins and mucin-like proteoglycans are extensively modified with a complex array of phosphoglycan chains that are linked to Ser/Thr-rich domains via a common Man-alpha1-PO4-Ser linkage.


go_id: GO:0018429
ontology: BP
term:
copper incorporation into copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide

definition:
The incorporation of copper into a 4Cu-S copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide.


go_id: GO:0018441
term: iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide
ontology: BP
definition:
The incorporation of iron into a 8Fe-7S iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide, found in nitrogenase.


go_id: GO:0018445
term: prothoracicotrophic hormone activity
ontology: MF
definition:
The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.


go_id: GO:0018447
term: chloral hydrate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.


go_id: GO:0018448
term: hydroxymethylmethylsilanediol oxidase activity
ontology: MF
definition:
Catalysis of the reaction: hydroxymethylmethylsilanediol + O2 + 2 H+ + 2 e- = formylmethylsilanediol + 2 H2O.


go_id: GO:0018462
term: 4-(hydroxymethyl)benzenesulfonate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD(+) = 4-formylbenzenesulfonate + H(+) + NADH.


go_id: GO:0018466
term: limonene-1,2-diol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: (1S,2S,4R)-limonene-1,2-diol + DCPIP+ = DCPIPH + H+ + (1S,4R)-1-hydroxy-2-oxolimonene.


go_id: GO:0018472
term: 1-hydroxy-2-naphthaldehyde dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 1-hydroxy-2-naphthaldehyde + NAD+ + H2O = NADH + H+ + 1-hydroxy-2-naphthoate.


go_id: GO:0018473
term: cis-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + cis-2-methyl-5-isopropylhexa-2,5-dienoic acid.


go_id: GO:0018475
term: trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.


go_id: GO:0018480
term: 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate semialdehyde + H2O + NAD+ = 5-carboxymethyl-2-hydroxymuconate + NADH + H+.


go_id: GO:0018481
term: 4-hydroxymuconic-semialdehyde dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: <stereo>cis,trans</stereo>-4-hydroxymuconate semialdehyde + H(2)O + NAD(+) = 2 H(+) + maleylacetate + NADH.


go_id: GO:0018482
term: 4-formylbenzenesulfonate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 4-formylbenzenesulfonate + H(2)O + NAD(+) = 4-sulfobenzoate + 2 H(+) + NADH.


go_id: GO:0018489
term: vanillate monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: H(+) + NADH + O(2) + vanillate = 3,4-dihydroxybenzoate + formaldehyde + H(2)O + NAD(+).


go_id: GO:0018490
term: 4-hydroxyphenylpyruvate oxidase activity
ontology: MF
definition:
Catalysis of the reaction: 2 (4-hydroxyphenyl)pyruvate + O(2) = 2 (4-hydroxyphenyl)acetate + 2 CO(2).


go_id: GO:0018491
term: 2-oxobutyrate synthase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxobutanoate + CoA + oxidized ferredoxin = propanoyl-CoA + CO2 + reduced ferredoxin.


go_id: GO:0018495
term: 2-hydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 2-ketocyclohexane-1-carboxyl-CoA.


go_id: GO:0018496
term: 2,6-dihydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,6-dihydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA.


go_id: GO:0018497
term: 1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethene + 2 H+ + 2 e- = 1-chloro-2,2-bis(4-chlorophenyl)ethane. 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU; 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS.


go_id: GO:0018498
term: 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD+ = NADH + H+ + 3-(2,3-dihydroxyphenyl)propionate.


go_id: GO:0018500
term: trans-9R,10R-dihydrodiolphenanthrene dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + NAD+ = NADH + H+ + 9,10-dihydroxyphenanthrene.


go_id: GO:0018502
term: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.


go_id: GO:0018503
term: trans-1,2-dihydrodiolphenanthrene dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: trans-1,2-dihydrodiolphenanthrene + NAD+ = H+ + NADH + 1,2-dihydroxyphenanthrene.


go_id: GO:0018505
term: cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-1,2-dihydronaphthalene-1,2-diol + NAD+ = naphthalene-1,2-diol + NADH + H+.


go_id: GO:0018507
term: cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD(+) = H(+) + NADH + phenanthrene-3,4-diol.


go_id: GO:0018508
term: cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+ = catechol + CO2 + NADH + H+.


go_id: GO:0018509
term: cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+ = biphenyl-2,3-diol + NADH + H+.


go_id: GO:0018511
term: 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD(+) = 2,3-dihydroxy-p-cumate + H(+) + NADH.


go_id: GO:0018513
term: dibenzothiophene dihydrodiol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-1,2-dihydroxy-1,2-dihydrodibenzothiophene + NAD(+) = 1,2-dihydroxydibenzothiophene + H(+) + NADH.


go_id: GO:0018516
term: 2,4-dichlorobenzoyl-CoA reductase activity
ontology: MF
definition:
Catalysis of the reaction: 4-chlorobenzoyl-CoA + chloride + NADP(+) = 2,4-dichlorobenzoyl-CoA + NADPH.


go_id: GO:0018517
term: phthalate 4,5-cis-dihydrodiol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD(+) = 4,5-dihydroxyphthalate + H(+) + NADH.


go_id: GO:0018518
term: 5,6-dihydroxy-3-methyl-2-oxo-1,2,5,6-tetrahydroquinoline dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 5,6-dihydroxy-3-methyl-5,6-dihydroquinolin-2(1H)-one + NAD(+) = 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + H(+) + NADH.


go_id: GO:0018519
term: cis-dihydroethylcatechol dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-1,2-dihydro-3-ethylcatechol + NAD(+) = 3-ethylcatechol + H(+) + NADH.


go_id: GO:0018520
term: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate + NADP+ = 4-methylcatechol + NADPH + H+ + CO2.


go_id: GO:0018521
term: 1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD(+) = 3-methylcatechol + CO(2) + NADH.


go_id: GO:0018522
term: benzoyl-CoA reductase activity
ontology: MF
definition:
Catalysis of the reaction: 2 ADP + cyclohexa-1,5-diene-1-carbonyl-CoA + oxidized ferredoxin + 2 phosphate = 2 ATP + 2 H(2)O + benzoyl-CoA + reduced ferredoxin.


go_id: GO:0018525
term: 4-hydroxybenzoyl-CoA reductase activity
ontology: MF
definition:
Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.


go_id: GO:0018529
term: nitrilotriacetate monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: nitrilotriacetate + NADH + H+ + O2 = NAD+ + H2O + glyoxylate + iminodiacetate.


go_id: GO:0018530
term: (R)-6-hydroxynicotine oxidase activity
ontology: MF
definition:
Catalysis of the reaction: (R)-6-hydroxynicotine + H(2)O + O(2) = 6-hydroxypseudooxynicotine + H(2)O(2).


go_id: GO:0018531
term: (S)-6-hydroxynicotine oxidase activity
ontology: MF
definition:
Catalysis of the reaction: (S)-6-hydroxynicotine + H(2)O + O(2) = 6-hydroxypseudooxynicotine + H(2)O(2).


go_id: GO:0018532
term: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: N5,N10-methenyltetrahydromethanopterin + H2 = N5,N10-methylenetetrahydromethanopterin.


go_id: GO:0018537
term: coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase activity
ontology: MF
definition:
Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme F420 + H(+) = 5,10-methylenetetrahydromethanopterin + reduced coenzyme F420.


go_id: GO:0018538
term: epoxide carboxylase activity
ontology: MF
definition:
Catalysis of the generic reaction: epoxide + CO2 + NAD+ + electron donor = beta-keto acid + NADH + reduced electron donor; the electron donor may be NADPH or a dithiol. This reaction is the ring opening and carboxylation of an epoxide; for example: epoxypropane + CO2 + NAD+ + NADPH = acetoacetate + NADH + NADP+.


go_id: GO:0018542
term: 2,3-dihydroxy DDT 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,3-dihydroxy DDT + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8,8-tetrachloroocta-2E,4E-dienoate.


go_id: GO:0018543
term: 4-amino-2-nitroso-6-nitrotoluene reductase activity
ontology: MF
definition:
Catalysis of the reaction: 4-amino-2-hydroxylamino-6-nitrotoluene + NADP+ = NADPH + H+ + 4-amino-2-nitroso-6-nitrotoluene.


go_id: GO:0018544
term: 4-carboxy-4'-sulfoazobenzene reductase activity
ontology: MF
definition:
Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.


go_id: GO:0018545
term: NAD(P)H nitroreductase activity
ontology: MF
definition:
Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.


go_id: GO:0018548
term: pentaerythritol trinitrate reductase activity
ontology: MF
definition:
Catalysis of the reaction: pentaerythritol trinitrate + NADPH = NADP+ + nitrate + pentaerythritol dinitrate.


go_id: GO:0018549
term: methanethiol oxidase activity
ontology: MF
definition:
Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.


go_id: GO:0018550
term: tetrachloro-p-hydroquinone reductive dehalogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,3,5,6-tetrachlorohydroquinone + 2 glutathione = 2,3,6-trichlorohydroquinone + glutathione disulfide + HCl.


go_id: GO:0018553
term: 3-(2,3-dihydroxyphenyl)propionate 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3-(2,3-dihydroxyphenyl)propionate + O2 = 2-hydroxy-6-keto-nona-2,4-dienedioate.


go_id: GO:0018554
term: 1,2-dihydroxynaphthalene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2-dihydroxynaphthalene + O2 = 2-hydroxychromene-2-carboxylate. C6 of the substrate molecular may have an NH2 group attached.


go_id: GO:0018555
term: phenanthrene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: phenanthrene + NADH + H+ + O2 = NAD+ + cis-3,4-dihydroxy-3,4-dihydrophenanthrene.


go_id: GO:0018556
term: 2,2',3-trihydroxybiphenyl dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).


go_id: GO:0018557
term: 1,2-dihydroxyfluorene 1,1-alpha-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2-dihydroxyfluorene + O2 = 2-hydroxy-4-(2-oxo-1,3-dihydro-2H-inden-1-ylidene) but-2-enoic acid.


go_id: GO:0018558
term: 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + O2 = 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon.


go_id: GO:0018559
term: 1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethene 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,1-dichloro-2-(dihydroxy-4'-chorophenyl)-2-(4-chlorophenyl)ethene + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate.


go_id: GO:0018561
term: 2'-aminobiphenyl-2,3-diol 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2'-aminobiphenyl-2,3-diol + O2 = H+ + 2-hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate.


go_id: GO:0018562
term: 3,4-dihydroxyfluorene 4,4-alpha-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3,4-dihydroxyfluorene + O2 = 2-hydroxy-4-(1-oxo-1,3-dihydro-2H-inden-2-ylidene) but-2-enoic acid.


go_id: GO:0018565
term: dihydroxydibenzothiophene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2-dihydroxydibenzothiophene + O2 = cis-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate.


go_id: GO:0018566
term: 1,2-dihydroxynaphthalene-6-sulfonate 1,8a-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2-dihydroxynaphthalene-6-sulfonate + O2 = H+ + (Z)-4-(2-hydroxy-5-sulfonatophenyl)-2-oxo-3-butenoate.


go_id: GO:0018568
term: 3,4-dihydroxyphenanthrene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3,4-dihydroxyphenanthrene + O2 = H+ + 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate.


go_id: GO:0018570
term: p-cumate 2,3-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: p-cumate + NADH + H+ + O2 = NAD+ + cis-2,3-dihydroxy-2,3-dihydro-p-cumate.


go_id: GO:0018571
term: 2,3-dihydroxy-p-cumate dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,3-dihydroxy-p-cumate + O2 = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate.


go_id: GO:0018574
term: 2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.


go_id: GO:0018582
term: 1-hydroxy-2-naphthoate 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1-hydroxy-2-naphthoate + O2 = (3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate.


go_id: GO:0018583
term: biphenyl-2,3-diol 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: biphenyl-2,3-diol + O2 = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O.


go_id: GO:0018584
term: 2,4,5-trichlorophenoxyacetic acid oxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4,5-trichlorophenoxyacetic acid + 1/2 O2 = glyoxylate + 2,4,5-trichlorophenol.


go_id: GO:0018596
term: dimethylsilanediol hydroxylase activity
ontology: MF
definition:
Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.


go_id: GO:0018597
term: ammonia monooxygenase activity
ontology: MF
definition:
Catalysis of the oxidation of alkanes (up to C8) to alcohols and alkenes (up to C5) to epoxides and alcohols in the presence of ammonium ions.


go_id: GO:0018602
term: 2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.


go_id: GO:0018606
term: benzenesulfonate dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 + H+ = NAD+ + HSO3(-) + 4-methylcatechol.


go_id: GO:0018609
term: chlorobenzene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,3-unsubstituted benzenoid + O2 + NAD(P)H + H+ = 2,3-cis-dihydroxydihydrobenzenoid + NAD(P)+. Substrates include 1,4-dichlorobenzene (forms 3,6-dichloro-cis-1,2-dihydroxycyclohexa-3,5-diene), 1,2,3,4-tetrachlorobenzene (forms cis-chlorobenzene dihydrodiol) and 1,2,4-trichlorobenzene (forms 3,4,6-trichloro-cis-1,2-dihydroxycyclohexa-3,5-diene).


go_id: GO:0018611
term: toluate dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: methylbenzoate + NADH + O2 + H+ = NAD+ + 1,2-dihydroxymethylcyclohexa-3,5-dienecarboxylate.


go_id: GO:0018612
term: dibenzothiophene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: dibenzothiophene + NADH + O2 + H+ = NAD+ + cis-1,2-dihydroxy-1,2-dihydrodibenzothiophene.


go_id: GO:0018613
term: 9-fluorenone dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 9-fluorenone + 2 NADPH + O2 = 2 NADP+ + 3,4-dihydroxy-3,4-dihydro-9-fluorenone.


go_id: GO:0018614
term: ethylbenzene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: ethylbenzene + O2 + NADH + H+ = NAD+ + cis-2,3-dihydroxy-2,3-dihydroethylbenzene.


go_id: GO:0018619
term: benzene 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: benzene + H(+) + NADH + O(2) = cis-cyclohexa-3,5-diene-1,2-diol + NAD(+).


go_id: GO:0018620
term: phthalate 4,5-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: H(+) + NADH + O(2) + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD(+).


go_id: GO:0018621
term: 4-sulfobenzoate 3,4-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 4-sulfobenzoate + H(+) + NADH + O(2) = 3,4-dihydroxybenzoate + NAD(+) + sulfite.


go_id: GO:0018622
term: 4-chlorophenylacetate 3,4-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 4-chlorophenylacetate + NADH + O(2) = 3,4-dihydroxyphenylacetate + chloride + NAD(+).


go_id: GO:0018624
term: toluene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: H(+) + NADH + O(2) + toluene = (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diol + NAD(+).


go_id: GO:0018625
term: naphthalene 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: naphthalene + NADH + H+ + O2 = (1R,2S)-1,2-dihydronaphthalene-1,2-diol + NAD+.


go_id: GO:0018627
term: 2-aminobenzenesulfonate 2,3-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H(+) + NADH + O(2) = 2,3-dihydroxybenzenesulfonate + NAD(+) + NH(4)(+). 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.


go_id: GO:0018628
term: terephthalate 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: H(+) + NADH + O(2) + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD(+).


go_id: GO:0018629
term: 2-hydroxyquinoline 5,6-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: quinolin-2-ol + NADH + H+ + O2 = 2,5,6-trihydroxy-5,6-dihydroquinoline + NAD+.


go_id: GO:0018635
term: (R)-limonene 1,2-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (4R)-limonene + NAD(P)H + H+ + O2 = NAD(P)+ + H2O + (4R)-limonene-1,2-epoxide.


go_id: GO:0018637
term: 1-hydroxy-2-naphthoate hydroxylase activity
ontology: MF
definition:
Catalysis of the reaction: 1-hydroxy-2-naphthoate + O2 + NADPH + 2 H+ = NADP+ + H2O + CO2 + 1,2-dihydroxynaphthalene.


go_id: GO:0018639
term: xylene monooxygenase activity
ontology: MF
definition:
Catalysis of the reactions: toluene + 1/2 O2 = benzyl alcohol, and xylene + 1/2 O2 = methylbenzyl alcohol.


go_id: GO:0018640
term: dibenzothiophene monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: dibenzothiophene + NADH + H+ + O2 = dibenzothiophene-5-oxide + NAD+ + H2O.


go_id: GO:0018641
term: 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.


go_id: GO:0018646
term: 1-hydroxy-2-oxolimonene 1,2-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (1S,4R)-1-hydroxy-2-oxolimonene + NADPH + O2 = NADP+ + OH- + (3R)-3-isopropenyl-6-oxoheptanoate.


go_id: GO:0018653
term: 3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.


go_id: GO:0018655
term: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA 1,2-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA + NADH + H+ + O2 = NAD+ + H2O + delta2,5-3,4,4-trimethylpimelyl-CoA.


go_id: GO:0018663
term: 2,6-dihydroxypyridine 3-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,6-dihydroxypyridine + H(+) + NADH + O(2) = 2,3,6-trihydroxypyridine + H(2)O + NAD(+).


go_id: GO:0018666
term: 2,4-dichlorophenol 6-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dichlorophenol + NADPH + H+ + O2 = 3,5-dichlorocatechol + NADP+ + H2O.


go_id: GO:0018668
term: 3-hydroxybenzoate 4-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3-hydroxybenzoate + H(+) + NADPH + O(2) = 3,4-dihydroxybenzoate + H(2)O + NADP(+).


go_id: GO:0018669
term: 3-hydroxybenzoate 6-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 3-hydroxybenzoate + H(+) + NADH + O(2) = 2,5-dihydroxybenzoate + H(2)O + NAD(+).


go_id: GO:0018670
term: 4-aminobenzoate 1-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 4-aminobenzoate + NADPH + H+ + O2 = 4-hydroxyaniline + NADP+ + H2O + CO2.


go_id: GO:0018671
term: 4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity
ontology: MF
definition:
Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.


go_id: GO:0018672
term: anthranilate 3-monooxygenase (deaminating) activity
ontology: MF
definition:
Catalysis of the reaction: anthranilate + 2 H(+) + NADPH + O(2) = 2,3-dihydroxybenzoate + NADP(+) + NH(4)(+).


go_id: GO:0018673
term: anthraniloyl-CoA monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-aminobenzoyl-CoA + 2 NADPH + 2 H+ + O2 = 2-amino-5-oxocyclohex-1-enecarboxyl-CoA + H2O + 2 NADP+.


go_id: GO:0018674
term: (S)-limonene 3-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (4S)-limonene + H(+) + NADPH + O(2) = (1S,6R)-isopiperitenol + H(2)O + NADP(+).


go_id: GO:0018676
term: (S)-limonene 7-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (4S)-limonene + H(+) + NADPH + O(2) = (4S)-perillyl alcohol + H(2)O + NADP(+).


go_id: GO:0018677
term: pentachlorophenol monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.


go_id: GO:0018679
term: dibenzothiophene-5,5-dioxide monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: dibenzothiophene-5,5-dioxide + O2 + 2 NADH + H+ = 2 NAD+ + H2O + 2'-hydroxybiphenyl-2-sulfinate.


go_id: GO:0018681
term: deisopropylatrazine monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2 deisopropylatrazine + O2 = 2 acetaldehyde + 2 deisopropyldeethylatrazine.


go_id: GO:0018683
term: camphor 5-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (+)-camphor + putidaredoxin + O2 = (+)-exo-5-hydroxycamphor + oxidized putidaredoxin + H2O.


go_id: GO:0018684
term: 2,5-diketocamphane 1,2-monooxygenase
ontology: MF
definition:
Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.


go_id: GO:0018685
term: alkane 1-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: octane + reduced rubredoxin + O2 = 1-octanol + oxidized rubredoxin + H2O.


go_id: GO:0018687
term: biphenyl 2,3-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: biphenyl + NADH + H+ + O2 = (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+. This reaction requires Fe2+.


go_id: GO:0018688
term: DDT 2,3-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane + O2 + 2 H+ + 2 e- = cis-2,3-dihydrodiol DDT. 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane is also known as DDT.


go_id: GO:0018689
term: naphthalene disulfonate 1,2-dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).


go_id: GO:0018690
term: 4-methoxybenzoate monooxygenase (O-demethylating) activity
ontology: MF
definition:
Catalysis of the reaction: 4-methoxybenzoate + AH(2) + O(2) = 4-hydroxybenzoate + A + formaldehyde + H(2)O.


go_id: GO:0018700
term: 2-chloro-N-isopropylacetanilide reductive dehalogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.


go_id: GO:0018701
term: 2,5-dichlorohydroquinone reductive dehalogenase activity
ontology: MF
definition:
Catalysis of the reaction: organohalide + 2 H+ + 2 e- = R-H + HCl. Reactants include chlorohydroquinone (forms hydroquinone) and 2,5-dichlorohydroquinone (forms chlorohydroquinone).


go_id: GO:0018702
term: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene dehalogenase activity
ontology: MF
definition:
Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene + H+ + 2 e- = Cl- + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene is also known as DDE; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.


go_id: GO:0018703
term: 2,4-dichlorophenoxyacetate dehalogenase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dichlorophenoxyacetic acid + H+ + 2 e- = Cl- + 4-chlorophenoxyacetate.


go_id: GO:0018706
term: pyrogallol hydroxytransferase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2,3,5-tetrahydroxybenzene + 1,2,3-trihydroxybenzene = 1,3,5-trihydroxybenzene + 1,2,3,5-tetrahydroxybenzene.


go_id: GO:0018708
term: thiol S-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + a thiol = S-adenosyl-L-homocysteine + a thioether.


go_id: GO:0018710
term: acetone carboxylase activity
ontology: MF
definition:
Catalysis of the reaction: acetone + ATP + CO(2) + 2 H(2)O = acetoacetate + AMP + 4 H(+) + 2 phosphate.


go_id: GO:0018715
term: 9-phenanthrol UDP-glucuronosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: 9-phenanthrol + UDP-glucuronate = 9-phenanthryl-beta-D-glucuronide + UDP.


go_id: GO:0018718
term: 1,2-dihydroxy-phenanthrene glycosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.


go_id: GO:0018721
term: trans-9R,10R-dihydrodiolphenanthrene sulfotransferase activity
ontology: MF
definition:
Catalysis of the reaction: trans-9R,10R-dihydrodiolphenanthrene + 2 X-SO3(-) = 2 HX + phenanthrene-9,10-dihydrodiolsulfate conjugate.


go_id: GO:0018725
term: trans-3,4-dihydrodiolphenanthrene sulfotransferase activity
ontology: MF
definition:
Catalysis of the reaction: trans-3,4-dihydrodiolphenanthrene + 2 X-SO3(-) = 2 HX + phenanthrene-3,4-dihydrodiolsulfate conjugate.


go_id: GO:0018742
term: epoxide hydrolase B activity
ontology: MF
definition:
Catalysis of the hydrolysis of the ether in chloro- or hydroxyepoxypropane to produce chloropropane diol or glycerol. Acts on R enantiomers.


go_id: GO:0018744
term: limonene-1,2-epoxide hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: limonene-1,2-epoxide + H2O = limonene-1,2-diol. Other substrates include alicyclic and 1-methyl-substituted epoxides, such as 1-methylcyclohexene oxide, indene oxide and cyclohexene oxide.


go_id: GO:0018745
term: epoxide hydrolase A activity
ontology: MF
definition:
Catalysis of the hydrolysis of the ether in chloro-, bromo- or hydroxyepoxypropane to produce a chloro- or bromopropane diol or glycerol.


go_id: GO:0018749
term: (3,5-dichlorophenylurea)acetate amidohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: (3,5-dichlorophenylurea)acetate + OH- = 3,5-dichloroaniline + N-carboxyglycine.


go_id: GO:0018755
term: 2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + OH- = 2,4-dihydroxy-6-amino-1,3,5-triazine + Cl-.


go_id: GO:0018757
term: deisopropylhydroxyatrazine aminohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.


go_id: GO:0018758
term: 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine aminohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine + H2O = CH3CH2NH2 + cyanuric acid.


go_id: GO:0018759
term: methenyltetrahydromethanopterin cyclohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2)O = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + H(+).


go_id: GO:0018761
term: bromoxynil nitrilase activity
ontology: MF
definition:
Catalysis of the reaction: 3,5-dibromo-4-hydroxybenzonitrile + 2 H(2)O = 3,5-dibromo-4-hydroxybenzoate + NH(4)(+). Involved in the bacterial degradation of the herbicide bromoxynil.


go_id: GO:0018763
term: hydroxydechloroatrazine ethylaminohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 4-(ethylamino)-2-hydroxy-6-(isopropylamino)-1,3,5-triazine + H2O = N-isopropylammelide + ethylamine.


go_id: GO:0018765
term: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: cis,cis-2-hydroxy-6-oxohept-2,4-dienoate + OH- = cis-2-hydroxypenta-2,4-dienoate + acetate.


go_id: GO:0018767
term: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate + H2O = cis-2-hydroxypenta-2,4-dienoate + isobutyrate.


go_id: GO:0018768
term: 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate + H2O = 2-aminobenzoate + cis-2-hydroxypenta-2,4-dienoate.


go_id: GO:0018769
term: 2-hydroxy-6-oxoocta-2,4-dienoate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxy-6-oxoocta-2,4-dienoate + H2O = H+ + propanoate + cis-2-hydroxypenta-2,4-dienoate.


go_id: GO:0018770
term: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2Z,4Z,7-trienoate + H2O = 2-(4'-chlorophenyl)-3,3-dichloropropenoate + cis-2-Hydroxy-3-chloropenta-2,4-dienone + H+.


go_id: GO:0018771
term: 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: (2E,4Z)-2-hydroxy-6-oxonona-2,4-dienedioate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + H+ + succinate.


go_id: GO:0018777
term: 1,3,4,6-tetrachloro-1,4-cyclohexadiene halidohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: alkyl halide + H2O = alcohol + HCl. Substrates are 1,3(R),4,6(R)-tetrachloro-1,4-cyclohexadiene (forms 2,4,5-trichloro-2,5-cyclohexadiene-1-ol) and 2,4,5-trichloro-2,5-cyclohexadiene-1-ol (forms 2,5-dichloro-2,5-cyclohexadiene-1,4-diol).


go_id: GO:0018783
term: deisopropyldeethylatrazine hydrolase activity
ontology: MF
definition:
Catalysis of the reaction: deisopropyldeethylatrazine + H2O = 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + NH3.


go_id: GO:0018788
term: atrazine chlorohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: atrazine + H(2)O = 4-(ethylamino)-2-hydroxy-6-(isopropylamino)-1,3,5-triazine + chloride + H(+).


go_id: GO:0018791
term: 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate decarboxylase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate = CO2 + 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate.


go_id: GO:0018792
term: bis(4-chlorophenyl)acetate decarboxylase activity
ontology: MF
definition:
Catalysis of the reaction: bis(4-chlorophenyl)acetate + H+ = CO2 + bis(4-chlorophenyl)methane. Bis(4-chlorophenyl)acetate is also known as DDA; bis(4-chlorophenyl)methane is also known as DDM.


go_id: GO:0018802
term: 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate = pyruvate + succinic semialdehyde.


go_id: GO:0018803
term: 4-(2-carboxyphenyl)-2-oxobut-3-enoate aldolase activity
ontology: MF
definition:
Catalysis of the reaction: (3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate = 2-carboxybenzaldehyde + pyruvate.


go_id: GO:0018807
term: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
ontology: MF
definition:
Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.


go_id: GO:0018808
term: trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate hydratase-aldolase activity
ontology: MF
definition:
Catalysis of the reaction: trans-4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate + H2O = pyruvate + 1-hydroxy-2-naphthaldehyde.


go_id: GO:0018810
term: trans-4-[2-(3-hydroxy)-thionaphthenyl]-2-oxo-3-butenoate hydratase activity
ontology: MF
definition:
Catalysis of the reaction: trans-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate + H2O = pyruvate + 3-hydroxy-2-formylbenzothiophene.


go_id: GO:0018811
term: cyclohex-1-ene-1-carboxyl-CoA hydratase activity
ontology: MF
definition:
Catalysis of the reaction: cyclohex-1-ene-1-carboxyl-CoA + H2O = 2-hydroxycyclohexane-1-carboxyl-CoA.


go_id: GO:0018812
term: 3-hydroxyacyl-CoA dehydratase activity
ontology: MF
definition:
Catalysis of the reaction: alkene-CoA + H2O = alcohol-CoA. Substrates are crotonoyl-CoA (producing 3-hydroxyacyl-CoA) and 2,3-didehydro-pimeloyl-CoA (producing 3-hydroxypimeloyl-CoA).


go_id: GO:0018813
term: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxo-3-enoate-4-benzenoid + H2O = pyruvate + benzaldehyde derivative. Substrates are (3E)-4-(5-amino-2-hydroxy-phenyl)-2-oxo-but-3-ene-1-oic-acid (forms 5-aminosalicylaldehyde) and trans-o-hydroxybenzylidenepyruvate (forms salicylaldehyde).


go_id: GO:0018815
term: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity
ontology: MF
definition:
Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.


go_id: GO:0018817
term: 2-oxo-hept-3-ene-1,7-dioate hydratase activity
ontology: MF
definition:
Catalysis of the reaction: cis-2-oxohept-3-ene-1,7-dioate + H2O = 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate.


go_id: GO:0018823
term: cyclohexa-1,5-dienecarbonyl-CoA hydratase activity
ontology: MF
definition:
Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H(2)O = 6-hydroxycyclohex-1-enecarbonyl-CoA.


go_id: GO:0018827
term: 1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity
ontology: MF
definition:
Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethane = HCl + unsym-bis(4-chlorophenyl)ethene. 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS; unsym-bis(4-chlorophenyl)ethene is also known as DDNU.


go_id: GO:0018829
term: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity
ontology: MF
definition:
Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane = HCl + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethane is also known as DDD; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.


go_id: GO:0018830
term: gamma-hexachlorocyclohexane dehydrochlorinase activity
ontology: MF
definition:
Catalysis of the reaction: gamma-hexachlorocyclohexane + HCl = 1,3(R),4(S),5(S),6(R)-pentachlorocyclohexene.


go_id: GO:0018831
term: 5-chloro-1,2,4-trihydroxybenzene dechlorinase activity
ontology: MF
definition:
Catalysis of the reaction: 5-chloro-1,2,4-trihydroxybenzene = Cl- + H+ + 2-hydroxy-1,4-benzoquinone.


go_id: GO:0018833
term: DDT-dehydrochlorinase activity
ontology: MF
definition:
Catalysis of the reaction: 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane = 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene + chloride + H(+).


go_id: GO:0018835
term: carbon phosphorus lyase activity
ontology: MF
definition:
Catalysis of the reaction: alkylphosphonic acid = R-CH3 + phosphate. Substrates include aminomethylphosphonic acid (AMPA) (forms methylamine), dimethylphosphinic acid (forms methylphosphonic acid), glyphosate (forms sarcosine) and methylphosphonic acid (forms phosphate).


go_id: GO:0018837
term: 2-hydroxy-2H-benzo[h]chromene-2-carboxylate isomerase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate = cis -4-(1'-hydroxynaphth-2'-yl)-2-oxobut-3-enoate.


go_id: GO:0018839
term: cis-4-[2-(3-hydroxy)-thionaphthenyl]-2-oxo-3-butenoate isomerase activity
ontology: MF
definition:
Catalysis of the reaction: cis-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate = trans-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate.


go_id: GO:0018845
term: 2-hydroxychromene-2-carboxylate isomerase activity
ontology: MF
definition:
Catalysis of the reaction: 2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate. (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate is also known as trans-o-hydroxybenzylidenepyruvate.


go_id: GO:0018852
term: dichloromuconate cycloisomerase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate = 2,4-dichloro-cis,cis-muconate.


go_id: GO:0018854
term: 3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity
ontology: MF
definition:
Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.


go_id: GO:0018855
term: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetate + ATP + CoA = AMP + diphosphate + 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA.


go_id: GO:0018856
term: benzoyl acetate-CoA ligase activity
ontology: MF
definition:
Catalysis of the reaction: 3-oxo-3-phenylpropionate + CoA + ATP = AMP + diphosphate + benzoyl acetyl-CoA.


go_id: GO:0018857
term: 2,4-dichlorobenzoate-CoA ligase activity
ontology: MF
definition:
Catalysis of the reaction: 2,4-dichlorobenzoate + ATP + CoASH = AMP + diphosphate + 2,4-dichlorobenzoyl-CoA.


go_id: GO:0018859
term: 4-hydroxybenzoate-CoA ligase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + 4-hydroxybenzoate + CoA = AMP + diphosphate + 4-hydroxybenzoyl-CoA.


go_id: GO:0018861
term: 4-chlorobenzoate-CoA ligase activity
ontology: MF
definition:
Catalysis of the reaction: 4-chlorobenzoate + CoA + ATP = 4-chlorobenzoyl-CoA + AMP + diphosphate. This reaction requires magnesium and is part of the bacterial 2,4-dichlorobenzoate degradation pathway.


go_id: GO:0018863
term: phenanthrene-9,10-epoxide hydrolase (9S,10S-forming) activity
ontology: MF
definition:
Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9(S),10(S)-dihydrodiolphenanthrene.


go_id: GO:0018864
term: acetylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving acetylene, formula CH2CH2, the simplest of the alkynes.


go_id: GO:0018865
term: acrylonitrile metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving acrylonitrile, a colorless, volatile liquid with a pungent odor. Acrylonitrile is used in the production of acrylic fibers, plastics, and synthetic rubbers.


go_id: GO:0018866
term: adamantanone metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.


go_id: GO:0018867
term: alpha-pinene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.


go_id: GO:0018868
term: 2-aminobenzenesulfonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.


go_id: GO:0018870
term: anaerobic 2-aminobenzoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 2-aminobenzoate, a derivative of benzoic acid with an NH2 group attached to C2, that occurs in the absence of oxygen.


go_id: GO:0018871
term: 1-aminocyclopropane-1-carboxylate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.


go_id: GO:0018872
term: arsonoacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving arsonoacetate, a synthetic, organic compound containing a single arsenic atom. Arsonoacetate and other arsenic containing compounds are used in agricultural applications as animal feed additives, cotton defoliants and post-emergence grass herbicides.


go_id: GO:0018873
term: atrazine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide.


go_id: GO:0018874
term: benzoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.


go_id: GO:0018875
term: anaerobic benzoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the absence of oxygen.


go_id: GO:0018876
term: benzonitrile metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving benzonitrile. Benzonitrile is used as a solvent and chemical intermediate in the pharmaceutical, dyestuffs and rubber industries. It is highly toxic and harmful in contact with skin.


go_id: GO:0018877
term: beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.


go_id: GO:0018878
term: aerobic beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane that occur in presence of oxygen.


go_id: GO:0018879
term: biphenyl metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).


go_id: GO:0018880
term: 4-chlorobiphenyl metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-chlorobiphenyl, a member of the polychlorinated biphenyl (PCB) group of compounds, a very stable group of synthetic organic compounds composed of a biphenyl nucleus with 1-10 chlorine substituents. 4-chlorobiphenyl has been used as a model substrate to investigate PCB degradation.


go_id: GO:0018881
term: bromoxynil metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving bromoxynil, C7H3Br2NO, a dibrominated phenol derivative with a cyano (-CN) group attached. Bromoxynil is used as a herbicide for post-emergent control of annual broadleaf weeds and works by inhibiting photosynthesis in the target plants.


go_id: GO:0018882
term: (+)-camphor metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed.


go_id: GO:0018883
term: caprolactam metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.


go_id: GO:0018884
term: carbazole metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.


go_id: GO:0018885
term: carbon tetrachloride metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.


go_id: GO:0018886
term: anaerobic carbon tetrachloride metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations, that occur in the absence of oxygen.


go_id: GO:0018887
term: 4-carboxy-4'-sulfoazobenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-carboxy-4'-sulfoazobenzene, a sulfonated azo compound synthesized by nitro-amine condensation from sulfanilic acid and 4-nitrobenzoic acid.


go_id: GO:0018888
term: 3-chloroacrylic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 3-chloroacrylic acid, ClHC=CHCOOH, a chlorinated derivative of acrylic acid.


go_id: GO:0018889
term: 2-chloro-N-isopropylacetanilide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.


go_id: GO:0018890
term: cyanamide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving cyanamide, NCNH2, a cyanide compound which has been used as a fertilizer, defoliant and in many manufacturing processes. It often occurs as the calcium salt, sometimes also referred to as cyanamide. The citrated calcium salt is used in the treatment of alcoholism.


go_id: GO:0018891
term: cyclohexanol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving cyclohexanol, the monohydroxy derivative of cyclohexane. It is used as a solvent and blending agent.


go_id: GO:0018892
term: cyclohexylsulfamate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving cyclohexylsulfamate, also known as cyclamic acid. Sodium cyclohexylsulfamate (CHS-Na) was a widely used sweetening agent but was banned because of the suspicion of carcinogenicity and metabolic conversion to cyclohexylamine (CHA), a toxic substance. It is now used as a fungicide.


go_id: GO:0018893
term: dibenzofuran metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond. Dibenzofuran is a white crystalline solid created from the production of coal tar and used as an insecticide and an intermediate in the production of other chemicals.


go_id: GO:0018894
term: dibenzo-p-dioxin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.


go_id: GO:0018895
term: dibenzothiophene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond. Dibenzothiophene derivatives can be detected in diesel oil following hydrodesulfurization treatment to remove sulfur compounds that would otherwise generate sulfur oxides during combustion.


go_id: GO:0018896
term: dibenzothiophene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.


go_id: GO:0018897
term: dibenzothiophene desulfurization
ontology: BP
definition:
The removal of the sulfur atom from dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.


go_id: GO:0018898
term: 2,4-dichlorobenzoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).


go_id: GO:0018899
term: 1,2-dichloroethane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.


go_id: GO:0018900
term: dichloromethane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dichloromethane, a dichlorinated derivative of methane. It is a colorless organic liquid with a sweet, chloroform-like odor, often used as a paint remover.


go_id: GO:0018901
term: 2,4-dichlorophenoxyacetic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.


go_id: GO:0018902
term: 1,3-dichloro-2-propanol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic. DCP is used as a general solvent, as an intermediate in organic synthesis and in paints, varnishes, lacquers, water colors, binders and photographic lacquers.


go_id: GO:0018903
term: 1,3-dichloropropene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving members of the 1,3-dichloropropene family, which includes cis- and trans-1,3-dichloropropene. The 1,3-dichloropropenes are chlorinated hydrocarbons and the major active ingredients of commercial products for control of plant-parasitic nematodes.


go_id: GO:0018904
term: ether metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organic ethers, any anhydride of the general formula R1-O-R2, formed between two identical or nonidentical organic hydroxy compounds.


go_id: GO:0018905
term: dimethyl ether metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.


go_id: GO:0018906
term: methyl tert-butyl ether metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methyl tert-butyl ether, 2-methoxy-2-methylpropane. Methyl tert-butyl ether is a synthetic chemical which is mixed with gasoline for use in reformulated gasoline. It was first introduced as an additive for unleaded gasoline in the 1980s. It is also used as a laboratory reagent and a pharmaceutical agent.


go_id: GO:0018907
term: dimethyl sulfoxide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dimethyl sulfoxide, DMSO (C2H6OS), an alkyl sulfoxide that is practically odorless in its purified form. As a highly polar organic liquid, it is a powerful solvent. Its biological activities include the ability to penetrate plant and animal tissues and to preserve living cells during freezing.


go_id: GO:0018908
term: organosulfide cycle
ontology: BP
definition:
A cyclic series of interconversions involving dimethyl sulfide, methanethiol and hydrogen sulfide. Dimethylsulfoxide can also be converted to dimethyl sulfide, which enters the cycle.


go_id: GO:0018909
term: dodecyl sulfate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dodecyl sulfate, commonly found as sodium dodecyl sulfate (SDS), a component of a variety of synthetic surfactants.


go_id: GO:0018910
term: benzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.


go_id: GO:0018911
term: 1,2,4-trichlorobenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.


go_id: GO:0018912
term: 1,4-dichlorobenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring. It forms white crystals at room temperature and is used as an insecticidal fumigant, particularly in mothballs.


go_id: GO:0018913
term: anaerobic ethylbenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring, that occur in the absence of oxygen.


go_id: GO:0018914
term: chlorobenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving chlorobenzene, a derivative of benzene with a chlorine atoms attached to the ring. It is a colorless liquid that is manufactured for use as a solvent. It quickly evaporates in the air and is degraded by hydroxyl radicals that are produced photochemically. The gas acts as a source of ClOx, which helps in the breakdown of stratospheric ozone.


go_id: GO:0018915
term: ethylbenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving ethylbenzene (phenylethane), a benzene derivative with an ethyl group attached to the ring. It is a colorless liquid with a pungent odor used as a solvent and as a component of automotive and aviation fuels.


go_id: GO:0018916
term: nitrobenzene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.


go_id: GO:0018919
term: gamma-1,2,3,4,5,6-hexachlorocyclohexane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving gamma-1,2,3,4,5,6-hexachlorocyclohexane (also known as Lindane), the most common form of hexachlorohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.


go_id: GO:0018920
term: glyphosate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glyphosate, a broad-spectrum herbicide also known by the trade name Roundup. It is a member of a broad class of compounds known as phosphonic acids, which contain a direct carbon-to-phosphorus (C-P) bond.


go_id: GO:0018921
term: 3-hydroxybenzyl alcohol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 3-hydroxybenzyl alcohol, an aromatic compound which is an intermediate in several metabolic pathways, including the biosynthesis of patulin, a toxin and antiviral agent produced by some moulds such as Penicillium patulinum.


go_id: GO:0018922
term: iprodione metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving prodione, a colorless, odorless crystal. It is used as a dicarboximide contact fungicide to control a wide variety of crop diseases by inhibiting the germination of spores and the growth of the fungal mat (mycelium).


go_id: GO:0018923
term: limonene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.


go_id: GO:0018924
term: mandelate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.


go_id: GO:0018925
term: m-cresol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.


go_id: GO:0018926
term: methanesulfonic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.


go_id: GO:0018928
term: methyl ethyl ketone metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.


go_id: GO:0018929
term: methyl fluoride metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.


go_id: GO:0018930
term: 3-methylquinoline metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.


go_id: GO:0018934
term: nitrilotriacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.


go_id: GO:0018935
term: aerobic nitrilotriacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.


go_id: GO:0018936
term: anaerobic nitrilotriacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the absence of oxygen.


go_id: GO:0018937
term: nitroglycerin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitroglycerin, a well-known nitrate ester and an important component of dynamite and other propellants. Toxic to algae, invertebrate, and vertebrates.


go_id: GO:0018938
term: 2-nitropropane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.


go_id: GO:0018939
term: n-octane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving n-octane, the 8 carbon straight chain alkane used in organic syntheses, calibrations, and azeotropic distillations. It is a common component of gasoline and other petroleum products and the engine fuel antiknocking properties of an isomer of n-octane are used as a comparative standard in the Octane Rating System.


go_id: GO:0018940
term: orcinol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen, and synthesized, probably as a fungicide, by some higher plants.


go_id: GO:0018941
term: organomercury metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organomercury compound, any organic compound containing a mercury atom.


go_id: GO:0018942
term: organometal metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.


go_id: GO:0018944
term: tri-n-butyltin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving tri-n-butyltin, an organometallic compound composed of three butyl chains attached to a tin atom. Tri-n-butyltin is used as an antifouling agent in ship bottom paints and can be toxic to many marine organisms.


go_id: GO:0018945
term: organosilicon metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving any organosilicon, organic compounds that contain silicon, a nonmetal element analogous to carbon.


go_id: GO:0018946
term: aerobic organosilicon metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the presence of oxygen.


go_id: GO:0018947
term: anaerobic organosilicon metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.


go_id: GO:0018948
term: xylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.


go_id: GO:0018949
term: m-xylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.


go_id: GO:0018950
term: o-xylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.


go_id: GO:0018951
term: p-xylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.


go_id: GO:0018952
term: parathion metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.


go_id: GO:0018953
term: p-cymene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.


go_id: GO:0018954
term: pentaerythritol tetranitrate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving pentaerythritol tetranitrate, C(CH2-O-NO2)4, a substance produced for use as an explosive and a vasodilator.


go_id: GO:0018955
term: phenanthrene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving phenanthrene, a tricyclic aromatic hydrocarbon used in explosives and in the synthesis of dyes and drugs. Although phenanthrene is not mutagenic or carcinogenic, it has been shown to be toxic to marine diatoms, gastropods, mussels, crustaceans, and fish.


go_id: GO:0018956
term: phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(R),10(R)-dihydrodiolphenanthrene is the principal intermediate metabolite.


go_id: GO:0018957
term: phenanthrene catabolic process via trans-9(S),10(S)-dihydrodiolphenanthrene
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(S),10(S)-dihydrodiolphenanthrene is the principal intermediate metabolite.


go_id: GO:0018958
term: phenol-containing compound metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.


go_id: GO:0018959
term: aerobic phenol-containing compound metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.


go_id: GO:0018960
term: 4-nitrophenol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.


go_id: GO:0018961
term: pentachlorophenol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.


go_id: GO:0018962
term: 3-phenylpropionate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 3-phenylpropionate, the anion of phenylpropanoic acid. It is produced from putrefaction of proteins in soil or breakdown of several constituents of plants, such as lignin, various oils and resins.


go_id: GO:0018963
term: phthalate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving phthalate, the anion of phthalic acid. Phthalic acid diesters are used industrially in the production of a variety of household and consumer goods including plastic polymers, lubricating oils, and carriers for perfumes in cosmetics, while phthalic acid itself is used industrially as a plasticizer. Terephthalate is used in the synthesis of polyethylene terephthalate (polyethene terephthlate, abbreviated PET or PETE), a plastic polymer with many commercial uses.


go_id: GO:0018964
term: propylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining. It is used mainly in the preparation of alkylates for gasoline and in the production of polypropylene, acrylonitrile, propylene oxide and a number of other industrial chemicals.


go_id: GO:0018965
term: s-triazine compound metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.


go_id: GO:0018966
term: styrene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving styrene, an aromatic hydrocarbon liquid soluble in ether and alcohol. When heated, exposed to light or added to a peroxide catalyst, it undergoes polymerization to form polystyrene, a versatile material used in the manufacture of plastics, synthetic rubber, thermal insulation, and packaging. Styrene is a classified mutagen and a suspected carcinogen.


go_id: GO:0018967
term: tetrachloroethylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving tetrachloroethylene (tetrachloroethene), a derivative of ethene with the hydrogen atoms replaced by chlorines. Tetrachloroethene has been used primarily as a solvent in dry-cleaning industries and to a lesser extent as a degreasing solvent.


go_id: GO:0018968
term: tetrahydrofuran metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving tetrahydrofuran, a cyclic 4 carbon ether. It is one of the most polar ethers and is a widely used solvent for polar reagents. Since THF is very soluble in water and has a relatively low boiling point, significant amounts are often released into the environment, causing contamination problems.


go_id: GO:0018969
term: thiocyanate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving thiocyanate, the anion of thiocyanic acid, a toxic cyanide derivative commonly formed as a by-product in the production of gas for fuel, coke, and substances for chemical industries.


go_id: GO:0018970
term: toluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications.


go_id: GO:0018971
term: anaerobic toluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, that occur in the absence of oxygen.


go_id: GO:0018972
term: toluene-4-sulfonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving toluene-4-sulfonate, the anion of 4-toluene sulfonic acid, a white crystalline solid which is highly hygroscopic and soluble in water.


go_id: GO:0018973
term: trinitrotoluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it. This includes the explosive TNT, 1-methyl-2,4,6-trinitrobenzene.


go_id: GO:0018974
term: 2,4,6-trinitrotoluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.


go_id: GO:0018975
term: anaerobic 2,4,6-trinitrotoluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, that occur in the absence of oxygen.


go_id: GO:0018976
term: 1,2,3-tribromopropane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,2,3-tribromopropane, a toxic and volatile organic compound commonly used as a nematocide in agriculture.


go_id: GO:0018977
term: 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated broad spectrum contact insecticide.


go_id: GO:0018978
term: anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated, broad spectrum, contact insecticide, in the absence of oxygen.


go_id: GO:0018979
term: trichloroethylene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.


go_id: GO:0018980
term: 2,4,5-trichlorophenoxyacetic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound which is widely used as a herbicide, often as a weed killer for home lawns.


go_id: GO:0018981
term: triethanolamine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.


go_id: GO:0018982
term: vanillin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods and can be obtained as a by-product of the pulp and paper industry by the oxidative breakdown of lignin.


go_id: GO:0018983
term: Z-phenylacetaldoxime metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.


go_id: GO:0018984
term: naphthalenesulfonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving naphthalenesulfonate, sulfonated derivatives of naphthalene.


go_id: GO:0018989
term: apolysis
ontology: BP
definition:
The first process of molting, characterized by the detachment of the old cuticle from the underlying epidermal cells.


go_id: GO:0018990
term: ecdysis, chitin-based cuticle
ontology: BP
definition:
The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.


go_id: GO:0018995
term: host cellular component
ontology: CC
definition:
Any cellular component of a host cell. The host is an organism in which another organism, for instance a parasite or symbiont, spends part or all of its life cycle and from which it obtains nourishment and/or protection.


go_id: GO:0018996
term: molting cycle, collagen and cuticulin-based cuticle
ontology: BP
definition:
The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.


go_id: GO:0019005
term: SCF ubiquitin ligase complex
ontology: CC
definition:
A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).


go_id: GO:0019008
term: molybdopterin synthase complex
ontology: CC
definition:
A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.


go_id: GO:0019010
term: farnesoic acid O-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: farnesoic acid + S-adenosyl-methionine = methyl farnesoate + S-adenosyl-L-homocysteine.


go_id: GO:0019013
term: viral nucleocapsid
ontology: CC
definition:
The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.


go_id: GO:0019028
term: viral capsid
ontology: CC
definition:
The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.


go_id: GO:0019029
term: helical viral capsid
ontology: CC
definition:
The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.


go_id: GO:0019030
term: icosahedral viral capsid
ontology: CC
definition:
The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form an icosahedron, a solid with 20 faces and 12 vertices. Icosahedral capsids have 12 pentamers plus 10(T-1) hexamers, where T is the triangulation number. Tobacco satellite necrosis virus has such a capsid structure.


go_id: GO:0019033
term: viral tegument
ontology: CC
definition:
A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.


go_id: GO:0019034
term: viral replication complex
ontology: CC
definition:
Specific locations and structures in the virus infected cell involved in replicating the viral genome.


go_id: GO:0019035
term: viral integration complex
ontology: CC
definition:
A nucleoprotein complex containing viral genetic material and the viral integrase, required for genome integration into the host's genome. May contain other proteins.


go_id: GO:0019036
term: viral transcriptional complex
ontology: CC
definition:
Specific locations and structures in the virus infected cell involved in transcribing the viral genome.


go_id: GO:0019042
term: viral latency
ontology: BP
definition:
The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.


go_id: GO:0019043
term: establishment of viral latency
ontology: BP
definition:
A process by which a virus establishes a latent state within its host, either as an integrated provirus within the host genome or as an episome, where viral genome remains in the cytoplasm or nucleus as distinct objects.


go_id: GO:0019044
term: maintenance of viral latency
ontology: BP
definition:
The perpetuation of a latent state, generally by repressing the viruses own lytic genes expression and ensuring expression of viral genes which function to keep the viral genome from being detected by the host defense mechanisms.


go_id: GO:0019049
term: mitigation of host antiviral defense response
ontology: BP
definition:
A process by which a virus avoids or tolerates the effects of its host organism's defenses. Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.


go_id: GO:0019050
term: suppression by virus of host apoptotic process
ontology: BP
definition:
Any viral process that inhibits apoptosis of infected host cells, facilitating prolonged cell survival during viral replication.


go_id: GO:0019051
term: induction by virus of host apoptotic process
ontology: BP
definition:
The set of viral processes that induce an apoptotic process in infected host cells, facilitating release and spread of progeny virions.


go_id: GO:0019055
term: modification by virus of host cell cycle regulation
ontology: BP
definition:
Interactions, directly with the host cell macromolecular machinery, to allow a virus to modulate the rate of the host cell cycle to facilitate virus replication.


go_id: GO:0019058
term: viral life cycle
ontology: BP
definition:
A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.


go_id: GO:0019061
term: uncoating of virus
ontology: BP
definition:
The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.


go_id: GO:0019062
term: virion attachment to host cell
ontology: BP
definition:
The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.


go_id: GO:0019064
term: fusion of virus membrane with host plasma membrane
ontology: BP
definition:
Fusion of a viral membrane with the host cell membrane during viral entry. Results in release of the virion contents into the cytoplasm.


go_id: GO:0019065
term: receptor-mediated endocytosis of virus by host cell
ontology: BP
definition:
Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.


go_id: GO:0019068
term: virion assembly
ontology: BP
definition:
A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.


go_id: GO:0019070
term: viral genome maturation
ontology: BP
definition:
The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.


go_id: GO:0019075
term: virus maturation
ontology: BP
definition:
The refolding and structural rearrangements of virion parts to transition from the intermediate virion to the more mature virion. Maturation usually involves proteolysis events and changes in the folding of the virion proteins. Can occur inside the host cell or after release.


go_id: GO:0019076
term: viral release from host cell
ontology: BP
definition:
The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.


go_id: GO:0019080
term: viral gene expression
ontology: BP
definition:
A process by which a viral gene is converted into a mature gene product or products (proteins or RNA). This includes viral transcription, processing to produce a mature RNA product, and viral translation.


go_id: GO:0019082
term: viral protein processing
ontology: BP
definition:
Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein.


go_id: GO:0019083
term: viral transcription
ontology: BP
definition:
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.


go_id: GO:0019084
term: middle viral transcription
ontology: BP
definition:
The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.


go_id: GO:0019085
term: early viral transcription
ontology: BP
definition:
The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell.


go_id: GO:0019086
term: late viral transcription
ontology: BP
definition:
The transcription of the final group of viral genes of the viral life cycle, following middle transcription, or where middle transcription doesn't occur, following early transcription. Involves the transcription of genes encoding structural proteins.


go_id: GO:0019087
term: transformation of host cell by virus
ontology: BP
definition:
A virus-induced cellular transformation resulting in immortalized cells, or cells capable of indefinite replication.


go_id: GO:0019090
term: mitochondrial rRNA export from mitochondrion
ontology: BP
definition:
The process in which a rRNA, ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.


go_id: GO:0019091
term: mitochondrial lrRNA export from mitochondrion
ontology: BP
definition:
The process in which a lrRNA, large subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.


go_id: GO:0019092
term: mitochondrial srRNA export from mitochondrion
ontology: BP
definition:
The process in which a srRNA, small subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.


go_id: GO:0019094
term: pole plasm mRNA localization
ontology: BP
definition:
Any process in which mRNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.


go_id: GO:0019095
term: pole plasm mitochondrial rRNA localization
ontology: BP
definition:
Any process in which mitochondrial ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.


go_id: GO:0019096
term: pole plasm mitochondrial lrRNA localization
ontology: BP
definition:
Any process in which mitochondrial large ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.


go_id: GO:0019097
term: pole plasm mitochondrial srRNA localization
ontology: BP
definition:
Any process in which mitochondrial small ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.


go_id: GO:0019104
term: DNA N-glycosylase activity
ontology: MF
definition:
Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.


go_id: GO:0019116
term: hydroxy-nicotine oxidase activity
ontology: MF
definition:
Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.


go_id: GO:0019117
term: dihydroxyfluorene dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: a dihydroxyfluorene + O2 = the corresponding 2-hydroxy-4-(oxo-1,3-dihydro-2H-inden-ylidene) but-2-enoic acid.


go_id: GO:0019120
term: hydrolase activity, acting on acid halide bonds, in C-halide compounds
ontology: MF
definition:
Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.


go_id: GO:0019121
term: peptidoglycan-protein cross-linking via N6-mureinyl-L-lysine
ontology: BP
definition:
The process of linking a protein to peptidoglycan via the epsilon amino group of lysine to the diaminopimelic acid of the peptidoglycan.


go_id: GO:0019133
term: choline monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: choline + 2 reduced ferredoxin + O2 + 2 H+ = betaine aldehyde hydrate + 2 oxidized ferredoxin + H2O.


go_id: GO:0019134
term: glucosamine-1-phosphate N-acetyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: alpha-D-glucosamine 1-phosphate + acetyl-CoA = N-acetyl-alpha-D-glucosamine 1-phosphate + CoA + H(+).


go_id: GO:0019135
term: deoxyhypusine monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: protein N6-(4-aminobutyl)-L-lysine + donor-H2 + O2 = protein N6-((R)-4-amino-2-hydroxybutyl)-L-lysine + acceptor + H2O.


go_id: GO:0019139
term: cytokinin dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: N6-dimethylallyladenine + acceptor + H2O = adenine + 3-methylbut-2-enal + reduced electron acceptor.


go_id: GO:0019141
term: 2-dehydropantolactone reductase (B-specific) activity
ontology: MF
definition:
Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NADP+.


go_id: GO:0019143
term: 3-deoxy-manno-octulosonate-8-phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: 8-phospho-3-deoxy-D-manno-oct-2-ulosonate + H(2)O = 3-deoxy-D-manno-octulosonate + phosphate.


go_id: GO:0019153
term: protein-disulfide reductase (glutathione) activity
ontology: MF
definition:
Catalysis of the reaction: 2 glutathione + protein-disulfide = oxidized glutathione + protein-dithiol.


go_id: GO:0019155
term: 3-(imidazol-5-yl)lactate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: (S)-3-(imidazol-5-yl)lactate + NADP+ = 3-(imidazol-5-yl)pyruvate + NADPH + H+.


go_id: GO:0019156
term: isoamylase activity
ontology: MF
definition:
Catalysis of the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages in glycogen, amylopectin and their beta-limits dextrins.


go_id: GO:0019159
term: nicotinamide-nucleotide amidase activity
ontology: MF
definition:
Catalysis of the reaction: beta-nicotinamide D-ribonucleotide + H2O = beta-nicotinate D-ribonucleotide + NH3.


go_id: GO:0019160
term: NMN nucleosidase activity
ontology: MF
definition:
Catalysis of the reaction: H(2)O + nicotinamide mononucleotide = D-ribose 5-phosphate + H(+) + nicotinamide.


go_id: GO:0019161
term: diamine transaminase activity
ontology: MF
definition:
Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.


go_id: GO:0019163
term: pyridoxamine-phosphate transaminase activity
ontology: MF
definition:
Catalysis of the reaction: pyridoxamine 5'-phosphate + 2-oxoglutarate = pyridoxal 5'-phosphate + D-glutamate.


go_id: GO:0019164
term: pyruvate synthase activity
ontology: MF
definition:
Catalysis of the reaction: pyruvate + CoA + 2 oxidized ferredoxin = acetyl-CoA + CO2 + 2 reduced ferredoxin + 2 H+.


go_id: GO:0019168
term: 2-octaprenylphenol hydroxylase activity
ontology: MF
definition:
Catalysis of the reaction: 2-octaprenylphenol + NADPH + O2 + H+ = 2-octaprenyl-6-hydroxyphenol + NADP+ + H2O.


go_id: GO:0019171
term: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
ontology: MF
definition:
Catalysis of the reaction: a (3R)-3-hydroxyacyl-[acyl-carrier protein] = H2O + a trans-delta2-enoyl-acyl-[acyl-carrier protein].


go_id: GO:0019174
term: tetrahydrothiophene 1-oxide reductase activity
ontology: MF
definition:
Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.


go_id: GO:0019177
term: dihydroneopterin triphosphate pyrophosphohydrolase activity
ontology: MF
definition:
Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.


go_id: GO:0019179
term: dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity
ontology: MF
definition:
Catalysis of the reaction: dTDP-4-amino-4,6-dideoxy-D-glucose + 2-oxoglutarate = dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate.


go_id: GO:0019180
term: dTDP-4-amino-4,6-dideoxygalactose transaminase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxoglutarate + dTDP-4-amino-4,6-dideoxy-D-galactose = L-glutamate + dTDP-4-dehydro-6-deoxy-D-galactose.


go_id: GO:0019182
term: histamine-gated chloride channel activity
ontology: MF
definition:
Enables the transmembrane transfer of a chloride ion by a channel that opens when histamine has been bound by the channel complex or one of its constituent parts.


go_id: GO:0019183
term: histamine-gated chloride channel complex
ontology: CC
definition:
A protein complex that forms a transmembrane channel through which chloride ions may pass in response to histamine binding to the channel complex or one of its constituent parts.


go_id: GO:0019184
term: nonribosomal peptide biosynthetic process
ontology: BP
definition:
The biosynthetic process in which peptide bond formation occurs in the absence of the translational machinery. Examples include the synthesis of antibiotic peptides, and glutathione.


go_id: GO:0019185
term: snRNA-activating protein complex
ontology: CC
definition:
A protein complex that recognizes the proximal sequence element of RNA polymerase II and III snRNA promoters.


go_id: GO:0019186
term: acyl-CoA N-acyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of an acyl group from acyl-CoA to a nitrogen atom on an acceptor molecule.


go_id: GO:0019187
term: beta-1,4-mannosyltransferase activity
ontology: MF
definition:
Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.


go_id: GO:0019191
term: cellobiose transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of cellobiose from one side of a membrane to the other. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.


go_id: GO:0019194
term: sorbose transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of sorbose from one side of a membrane to the other. Sorbose is the ketohexose xylo-2-hexulose; L-sorbose is formed by bacterial oxidation of sorbitol. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.


go_id: GO:0019196
term: galactosamine transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of galactosamine from one side of a membrane to the other. Galactosamine is an aminodeoxysugar; D-galactosamine is a constituent of some glycolipids and glycosaminoglycans, commonly as its N-acetyl derivative.


go_id: GO:0019197
term: phosphoenolpyruvate-dependent sugar phosphotransferase complex
ontology: CC
definition:
Includes phosphoenolpyruvate-protein phosphatase (enzyme I of the phosphotransferase system) and protein-N(PI)-phosphohistidine-sugar phosphotransferase (enzyme II of the phosphotransferase system).


go_id: GO:0019198
term: transmembrane receptor protein phosphatase activity
ontology: MF
definition:
Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate.


go_id: GO:0019199
term: transmembrane receptor protein kinase activity
ontology: MF
definition:
Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.


go_id: GO:0019200
term: carbohydrate kinase activity
ontology: MF
definition:
Catalysis of the transfer of a phosphate group, usually from ATP, to a carbohydrate substrate molecule.


go_id: GO:0019205
term: nucleobase-containing compound kinase activity
ontology: MF
definition:
Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.


go_id: GO:0019207
term: kinase regulator activity
ontology: MF
definition:
Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.


go_id: GO:0019208
term: phosphatase regulator activity
ontology: MF
definition:
Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.


go_id: GO:0019209
term: kinase activator activity
ontology: MF
definition:
Binds to and increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.


go_id: GO:0019211
term: phosphatase activator activity
ontology: MF
definition:
Binds to and increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.


go_id: GO:0019212
term: phosphatase inhibitor activity
ontology: MF
definition:
Binds to and stops, prevents or reduces the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.


go_id: GO:0019215
term: intermediate filament binding
ontology: MF
definition:
Binding to an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space.


go_id: GO:0019216
term: regulation of lipid metabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.


go_id: GO:0019217
term: regulation of fatty acid metabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.


go_id: GO:0019218
term: regulation of steroid metabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.


go_id: GO:0019219
term: regulation of nucleobase-containing compound metabolic process
ontology: BP
definition:
Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.


go_id: GO:0019220
term: regulation of phosphate metabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates.


go_id: GO:0019221
term: cytokine-mediated signaling pathway
ontology: BP
definition:
The series of molecular signals initiated by the binding of a cytokine to a receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


go_id: GO:0019222
term: regulation of metabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.


go_id: GO:0019226
term: transmission of nerve impulse
ontology: BP
definition:
The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.


go_id: GO:0019229
term: regulation of vasoconstriction
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.


go_id: GO:0019230
term: proprioception
ontology: BP
definition:
The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors.


go_id: GO:0019232
term: perception of rate of movement
ontology: BP
definition:
The series of events by which an organism senses the speed and direction of movement of the body and its parts.


go_id: GO:0019233
term: sensory perception of pain
ontology: BP
definition:
The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances. This is a neurological process.


go_id: GO:0019234
term: sensory perception of fast pain
ontology: BP
definition:
The series of events required for an organism to receive a fast pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Fast pain is often subjectively described as a sharp or stabbing pain; in humans, the signals from a fast pain stimulus are perceived and relayed along myelinated A-delta fibers to the central nervous system, reaching their target in about 0.1 seconds.


go_id: GO:0019235
term: sensory perception of slow pain
ontology: BP
definition:
The series of events required for an organism to receive a slow pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Slow pain is often subjectively described as an aching or throbbing pain; in humans, the signals from a slow pain stimulus are perceived and relayed along unmyelinated C fibers to the central nervous system, reaching their target in about 1 second. Slow pain is often associated with tissue destruction.


go_id: GO:0019236
term: response to pheromone
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus.


go_id: GO:0019237
term: centromeric DNA binding
ontology: MF
definition:
Binding to a centromere, a region of chromosome where the spindle fibers attach during mitosis and meiosis.


go_id: GO:0019238
term: cyclohydrolase activity
ontology: MF
definition:
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2, in a reaction that involves the opening of a ring.


go_id: GO:0019239
term: deaminase activity
ontology: MF
definition:
Catalysis of the removal of an amino group from a substrate, producing a substituted or nonsubstituted ammonia (NH3/NH2R).


go_id: GO:0019240
term: citrulline biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.


go_id: GO:0019241
term: citrulline catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.


go_id: GO:0019242
term: methylglyoxal biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.


go_id: GO:0019243
term: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.


go_id: GO:0019244
term: lactate biosynthetic process from pyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of lactate from other compounds, including pyruvate.


go_id: GO:0019245
term: D(-)-lactate biosynthetic process from pyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of D(-)-lactate from other compounds, including pyruvate.


go_id: GO:0019246
term: L(+)-lactate biosynthetic process from pyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L(+)-lactate from other compounds, including pyruvate.


go_id: GO:0019247
term: lactate racemization
ontology: BP
definition:
Partial conversion of one lactate enantiomer into another so that the specific optical rotation is decreased, or even reduced to zero, in the resulting mixture.


go_id: GO:0019248
term: D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.


go_id: GO:0019249
term: lactate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of lactate, the anion of lactic acid.


go_id: GO:0019250
term: aerobic cobalamin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the presence of oxygen.


go_id: GO:0019251
term: anaerobic cobalamin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the absence of oxygen.


go_id: GO:0019252
term: starch biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of starch, the most important reserve polysaccharide in plants.


go_id: GO:0019253
term: reductive pentose-phosphate cycle
ontology: BP
definition:
The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.


go_id: GO:0019255
term: glucose 1-phosphate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1.


go_id: GO:0019256
term: acrylonitrile catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of acrylonitrile, a colorless, volatile liquid with a pungent odor. Acrylonitrile is used in the production of acrylic fibers, plastics, and synthetic rubbers.


go_id: GO:0019257
term: 4-nitrotoluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-nitrotoluene, 1-methyl-4-nitrobenzene. It is a light yellow liquid with a weak aromatic odor.


go_id: GO:0019258
term: 4-nitrotoluene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.


go_id: GO:0019260
term: 1,2-dichloroethane catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.


go_id: GO:0019261
term: 1,4-dichlorobenzene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring.


go_id: GO:0019262
term: N-acetylneuraminate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.


go_id: GO:0019263
term: adamantanone catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.


go_id: GO:0019264
term: glycine biosynthetic process from serine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glycine from other compounds, including serine.


go_id: GO:0019265
term: glycine biosynthetic process, by transamination of glyoxylate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glycine by the transamination of glyoxylate.


go_id: GO:0019266
term: asparagine biosynthetic process from oxaloacetate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of asparagine from other compounds, including oxaloacetate.


go_id: GO:0019267
term: asparagine biosynthetic process from cysteine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of asparagine from other compounds, including cysteine.


go_id: GO:0019270
term: aerobactin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of aerobactin (C22H36N4O13), a hydroxamate iron transport compound. It is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.


go_id: GO:0019271
term: aerobactin transport
ontology: BP
definition:
The directed movement of the hydroxamate iron transport compound aerobactin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aerobactin (C22H36N4O13) is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.


go_id: GO:0019272
term: L-alanine biosynthetic process from pyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of alanine from other compounds, including pyruvate.


go_id: GO:0019273
term: L-alanine biosynthetic process via ornithine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-alanine, via the intermediate ornithine.


go_id: GO:0019276
term: UDP-N-acetylgalactosamine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.


go_id: GO:0019277
term: UDP-N-acetylgalactosamine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.


go_id: GO:0019278
term: UDP-N-acetylgalactosamine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.


go_id: GO:0019279
term: L-methionine biosynthetic process from L-homoserine via cystathionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including L-homoserine, via the intermediate cystathionine.


go_id: GO:0019280
term: L-methionine biosynthetic process from homoserine via O-acetyl-L-homoserine and cystathionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of methionine from other compounds, including homoserine, via the intermediates O-acetyl-L-homoserine and cystathionine.


go_id: GO:0019281
term: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-succinyl-L-homoserine and cystathionine.


go_id: GO:0019283
term: L-methionine biosynthetic process from O-phospho-L-homoserine and cystathionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including O-phospho-L-homoserine and cystathionine.


go_id: GO:0019284
term: L-methionine salvage from S-adenosylmethionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-methionine from S-adenosylmethionine.


go_id: GO:0019285
term: glycine betaine biosynthetic process from choline
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.


go_id: GO:0019286
term: glycine betaine biosynthetic process from glycine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glycine betaine from other compounds, including glycine.


go_id: GO:0019287
term: isopentenyl diphosphate biosynthetic process, mevalonate pathway
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate, via the intermediate mevalonate. This pathway converts acetate, in the form of acetyl-CoA, to isopentenyl diphosphate (IPP), the fundamental unit in isoprenoid biosynthesis, through a series of mevalonate intermediates.


go_id: GO:0019288
term: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.


go_id: GO:0019289
term: rhizobactin 1021 biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of rhizobactin 1021, (E)-4-((3-(acetylhydroxyamino)propyl)-amino)-2-hydroxy-(2-(2-(3-(hydroxy(1-oxo-2-decenyl)amino)propyl)amino)-2-oxoethyl)-4-oxobutanoic acid, a siderophore produced by Sinorhizobium meliloti.


go_id: GO:0019290
term: siderophore biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.


go_id: GO:0019292
term: tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of tyrosine from other compounds, including chorismate, via the intermediate 4-hydroxyphenylpyruvate.


go_id: GO:0019294
term: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.


go_id: GO:0019295
term: coenzyme M biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.


go_id: GO:0019296
term: coenzyme M metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.


go_id: GO:0019297
term: coenzyme B metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.


go_id: GO:0019298
term: coenzyme B biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.


go_id: GO:0019299
term: rhamnose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.


go_id: GO:0019300
term: rhamnose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of rhamnose, the hexose 6-deoxy-L-mannose.


go_id: GO:0019301
term: rhamnose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.


go_id: GO:0019304
term: anaerobic rhamnose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.


go_id: GO:0019305
term: dTDP-rhamnose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.


go_id: GO:0019306
term: GDP-D-rhamnose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.


go_id: GO:0019307
term: mannose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.


go_id: GO:0019308
term: dTDP-mannose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.


go_id: GO:0019309
term: mannose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.


go_id: GO:0019310
term: inositol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.


go_id: GO:0019311
term: sorbose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.


go_id: GO:0019312
term: L-sorbose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.


go_id: GO:0019313
term: allose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.


go_id: GO:0019314
term: D-allose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.


go_id: GO:0019315
term: D-allose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.


go_id: GO:0019316
term: D-allose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.


go_id: GO:0019318
term: hexose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.


go_id: GO:0019319
term: hexose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.


go_id: GO:0019320
term: hexose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.


go_id: GO:0019321
term: pentose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.


go_id: GO:0019322
term: pentose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.


go_id: GO:0019323
term: pentose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.


go_id: GO:0019324
term: L-lyxose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose.


go_id: GO:0019325
term: anaerobic fructose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the absence of oxygen.


go_id: GO:0019326
term: nitrotoluene metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.


go_id: GO:0019328
term: anaerobic gallate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the absence of oxygen.


go_id: GO:0019329
term: ammonia oxidation
ontology: BP
definition:
The chemical reactions and pathways by which ammonia or ammonium is converted to molecular nitrogen or another nitrogen compound, with accompanying loss of electrons.


go_id: GO:0019330
term: aldoxime metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving aldoximes, compounds derived by the reaction of an aldose with hydroxylamine, thus containing the aldoxime group -HC=NOH.


go_id: GO:0019331
term: anaerobic respiration, using ammonium as electron donor
ontology: BP
definition:
The oxidation of ammonium (NH4) to nitrogen (N2) in the absence of oxygen, using nitrite (NO2) as the electron acceptor. It is suggested that hydroxylamine and ammonium are combined to yield hydrazine, which is subsequently oxidized to N2.


go_id: GO:0019332
term: aerobic respiration, using nitrite as electron donor
ontology: BP
definition:
The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.


go_id: GO:0019333
term: denitrification pathway
ontology: BP
definition:
The reduction of nitrate to dinitrogen by four reactions; each intermediate is transformed to the next lower oxidation state; also part of cellular bioenergetics; the nitrogen compounds can serve as terminal acceptors for electron transport phosphorylation in place of oxygen.


go_id: GO:0019334
term: p-cymene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.


go_id: GO:0019335
term: 3-methylquinoline catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 3-methylquinoline, C10H9N, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring.


go_id: GO:0019336
term: phenol-containing compound catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.


go_id: GO:0019337
term: tetrachloroethylene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.


go_id: GO:0019338
term: pentachlorophenol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.


go_id: GO:0019339
term: parathion catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of parathion, a highly toxic organophosphate compound. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition.


go_id: GO:0019340
term: dibenzofuran catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond.


go_id: GO:0019341
term: dibenzo-p-dioxin catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds.


go_id: GO:0019342
term: trypanothione biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of trypanothione (N1,N6,-bis(glutathionyl)spermidine) in two steps from glutathione and spermidine via an N1- or N8-glutathionylspermidine intermediate. Trypanothione appears to be an essential redox intermediate in intracellular thiol redox regulation. It also plays a role in protecting against oxidative stress.


go_id: GO:0019343
term: cysteine biosynthetic process via cystathionine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate cystathionine.


go_id: GO:0019344
term: cysteine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid.


go_id: GO:0019345
term: cysteine biosynthetic process via S-sulfo-L-cysteine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.


go_id: GO:0019346
term: transsulfuration
ontology: BP
definition:
The interconversion of homocysteine and cysteine via cystathionine. In contrast with enteric bacteria and mammals, Saccharomyces cerevisiae has two transsulfuration pathways employing two separate sets of enzymes.


go_id: GO:0019347
term: GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of GDP-alpha-D-mannosylchitobiosyldiphosphodolichol, a substance composed of mannosylchitobiosyldiphosphodolichol in glycosidic linkage with guanosine diphosphate.


go_id: GO:0019348
term: dolichol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.


go_id: GO:0019349
term: ribitol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose. It occurs free in some plants and is a component of riboflavin.


go_id: GO:0019350
term: teichoic acid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.


go_id: GO:0019351
term: dethiobiotin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.


go_id: GO:0019352
term: protoporphyrinogen IX biosynthetic process from glycine
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX from other compounds, including glycine.


go_id: GO:0019353
term: protoporphyrinogen IX biosynthetic process from glutamate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX from other compounds, including glutamate.


go_id: GO:0019354
term: siroheme biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.


go_id: GO:0019356
term: nicotinate nucleotide biosynthetic process from tryptophan
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.


go_id: GO:0019357
term: nicotinate nucleotide biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinate (pyridine 3-carboxylic acid).


go_id: GO:0019359
term: nicotinamide nucleotide biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.


go_id: GO:0019360
term: nicotinamide nucleotide biosynthetic process from niacinamide
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of nicotinamide nucleotide from other compounds, including niacinamide.


go_id: GO:0019361
term: 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.


go_id: GO:0019362
term: pyridine nucleotide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.


go_id: GO:0019363
term: pyridine nucleotide biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.


go_id: GO:0019364
term: pyridine nucleotide catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.


go_id: GO:0019365
term: pyridine nucleotide salvage
ontology: BP
definition:
Any process that generates a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base, from derivatives of them without de novo synthesis.


go_id: GO:0019369
term: arachidonic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.


go_id: GO:0019370
term: leukotriene biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.


go_id: GO:0019371
term: cyclooxygenase pathway
ontology: BP
definition:
The chemical reactions and pathways by which prostaglandins are formed from arachidonic acid, and in which prostaglandin-endoperoxide synthase (cyclooxygenase) catalyzes the committed step in the conversion of arachidonic acid to the prostaglandin-endoperoxides PGG2 and PGH2.


go_id: GO:0019372
term: lipoxygenase pathway
ontology: BP
definition:
The chemical reactions and pathways by which an unsaturated fatty acid (such as arachidonic acid or linolenic acid) is converted to other compounds, and in which the first step is hydroperoxide formation catalyzed by lipoxygenase.


go_id: GO:0019373
term: epoxygenase P450 pathway
ontology: BP
definition:
The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.


go_id: GO:0019374
term: galactolipid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.


go_id: GO:0019375
term: galactolipid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.


go_id: GO:0019376
term: galactolipid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.


go_id: GO:0019377
term: glycolipid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).


go_id: GO:0019379
ontology: BP
term:
sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)

definition:
The pathway by which inorganic sulfate is processed and incorporated into sulfated compounds, where the phosphoadenylyl sulfate reduction step is catalyzed by the enzyme phosphoadenylyl-sulfate reductase (thioredoxin) (EC:1.8.4.8).


go_id: GO:0019380
term: 3-phenylpropionate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 3-phenylpropionate, the anion of phenylpropanoic acid.


go_id: GO:0019381
term: atrazine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.


go_id: GO:0019382
term: carbon tetrachloride catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.


go_id: GO:0019383
term: (+)-camphor catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of (+)-camphor, a bicyclic monoterpene ketone.


go_id: GO:0019384
term: caprolactam catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid.


go_id: GO:0019385
term: methanogenesis, from acetate
ontology: BP
definition:
The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including acetate.


go_id: GO:0019386
term: methanogenesis, from carbon dioxide
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other compounds, including carbon dioxide (CO2).


go_id: GO:0019387
term: methanogenesis, from methanol
ontology: BP
definition:
The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanol.


go_id: GO:0019388
term: galactose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.


go_id: GO:0019389
term: glucuronoside metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.


go_id: GO:0019390
term: glucuronoside biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.


go_id: GO:0019391
term: glucuronoside catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.


go_id: GO:0019392
term: glucarate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glucarate, the dianion of glucaric acid, an aldaric acid derived from either glucose or gulose. There are two enantiomers L- and D-glucarate.


go_id: GO:0019393
term: glucarate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of glucarate, the anion of glucaric acid.


go_id: GO:0019394
term: glucarate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glucarate, the anion of glucaric acid.


go_id: GO:0019395
term: fatty acid oxidation
ontology: BP
definition:
The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.


go_id: GO:0019396
term: gallate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid (3,4,5-trihydroxybenzoic acid).


go_id: GO:0019397
term: gallate catabolic process via 2-pyrone-4,6-dicarboxylate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, via the intermediate 2-pyrone-4,6-dicarboxylate.


go_id: GO:0019398
term: gallate catabolic process via gallate dioxygenase activity
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, where the first step is the conversion of gallate to (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate catalyzed by gallate dioxygenase.


go_id: GO:0019400
term: alditol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.


go_id: GO:0019401
term: alditol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.


go_id: GO:0019402
term: galactitol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.


go_id: GO:0019403
term: galactitol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.


go_id: GO:0019404
term: galactitol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.


go_id: GO:0019405
term: alditol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.


go_id: GO:0019406
term: hexitol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of hexitols, any alditol with a chain of six carbon atoms in the molecule.


go_id: GO:0019407
term: hexitol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.


go_id: GO:0019408
term: dolichol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.


go_id: GO:0019409
term: aerobic respiration, using ammonia as electron donor
ontology: BP
definition:
The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.


go_id: GO:0019410
term: aerobic respiration, using carbon monoxide as electron donor
ontology: BP
definition:
The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.


go_id: GO:0019411
term: aerobic respiration, using ferrous ions as electron donor
ontology: BP
definition:
The metabolic process in which ferrous ions (Fe2+) are oxidized to ferric ions (Fe3+) to generate energy, coupled to the reduction of carbon dioxide.


go_id: GO:0019412
term: aerobic respiration, using hydrogen as electron donor
ontology: BP
definition:
The oxidation of hydrogen (H2) to water (H2O), using oxygen (O2) as the electron acceptor. A hydrogenase enzyme binds H2 and the hydrogen atoms are passed through an electron transfer chain to O2 to form water.


go_id: GO:0019413
term: acetate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.


go_id: GO:0019414
term: aerobic respiration, using sulfur or sulfate as electron donor
ontology: BP
definition:
An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.


go_id: GO:0019415
term: acetate biosynthetic process from carbon monoxide
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of acetate from other compounds, including carbon monoxide.


go_id: GO:0019416
term: polythionate oxidation
ontology: BP
definition:
The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.


go_id: GO:0019418
term: sulfide oxidation
ontology: BP
definition:
The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.


go_id: GO:0019419
term: sulfate reduction
ontology: BP
definition:
The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.


go_id: GO:0019420
term: dissimilatory sulfate reduction
ontology: BP
definition:
The reduction of sulfate to hydrogen sulfide, which acts as a terminal electron acceptor. Sulfate is activated to adenosine-phosphosulfate (APS) which is then reduced to sulfite, which is in turn reduced to hydrogen sulfide.


go_id: GO:0019422
term: disproportionation of elemental sulfur
ontology: BP
definition:
The process in which sulfur compounds with an intermediate oxidation state serve as both electron donors and electron acceptors in an energy-generating redox process. The reaction takes place anaerobically, in light and in the absence of CO2.


go_id: GO:0019423
term: sulfur oxidation, ferric ion-dependent
ontology: BP
definition:
A sulfur oxidation process that proceeds via the reaction catalyzed by sulfur:ferric ion oxidoreductase, and requires the presence of ferric ion (Fe3+).


go_id: GO:0019426
term: bisulfite reduction
ontology: BP
definition:
The chemical reactions and pathways resulting in the reduction of sulfate to thiosulfate via bisulfite.


go_id: GO:0019427
term: acetyl-CoA biosynthetic process from acetate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of acetyl-CoA from acetate, either directly or via acetylphosphate.


go_id: GO:0019428
term: allantoin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea.


go_id: GO:0019429
term: fluorene catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.


go_id: GO:0019430
term: removal of superoxide radicals
ontology: BP
definition:
Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).


go_id: GO:0019431
term: acetyl-CoA biosynthetic process from ethanol
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of acetyl-CoA from ethanol via acetaldehyde.


go_id: GO:0019432
term: triglyceride biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.


go_id: GO:0019433
term: triglyceride catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a triglyceride, any triester of glycerol.


go_id: GO:0019434
term: sophorosyloxydocosanoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.


go_id: GO:0019435
term: sophorosyloxydocosanoate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.


go_id: GO:0019436
term: sophorosyloxydocosanoate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.


go_id: GO:0019438
term: aromatic compound biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring.


go_id: GO:0019439
term: aromatic compound catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.


go_id: GO:0019440
term: tryptophan catabolic process to indole-3-acetate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including indole-3-acetate.


go_id: GO:0019441
term: tryptophan catabolic process to kynurenine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine.


go_id: GO:0019442
term: tryptophan catabolic process to acetyl-CoA
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including acetyl-CoA.


go_id: GO:0019444
term: tryptophan catabolic process to catechol
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including catechol.


go_id: GO:0019445
term: tyrosine catabolic process to fumarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of tyrosine into other compounds, including fumarate.


go_id: GO:0019447
term: D-cysteine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.


go_id: GO:0019448
term: L-cysteine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.


go_id: GO:0019449
term: L-cysteine catabolic process to hypotaurine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.


go_id: GO:0019450
term: L-cysteine catabolic process to pyruvate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including pyruvate.


go_id: GO:0019451
term: L-cysteine catabolic process to pyruvate, using cysteine dioxygenase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).


go_id: GO:0019452
term: L-cysteine catabolic process to taurine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine.


go_id: GO:0019453
term: L-cysteine catabolic process via cystine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-cysteine, via the intermediate cystine.


go_id: GO:0019454
term: L-cysteine catabolic process via cystine, using glutathione-cystine transhydrogenase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme glutathione-cystine transhydrogenase.


go_id: GO:0019455
term: L-cysteine catabolic process via cystine, using cystine reductase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.


go_id: GO:0019456
term: L-cysteine catabolic process via cystine, using cysteine transaminase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cysteine transaminase.


go_id: GO:0019457
term: methionine catabolic process to succinyl-CoA
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of methionine into other compounds, including succinyl-CoA.


go_id: GO:0019458
term: methionine catabolic process via 2-oxobutanoate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of methionine, via the intermediate 2-oxobutanoate.


go_id: GO:0019460
term: glutamine catabolic process to fumarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamine into other compounds, including fumarate.


go_id: GO:0019461
term: glutamine catabolic process to fumarate, using glutamate synthase (NADPH)
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).


go_id: GO:0019462
term: glutamine catabolic process to fumarate, using glutaminase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with conversion of glutamine into glutamate catalyzed by the enzyme glutaminase (EC:3.5.1.2).


go_id: GO:0019463
term: glycine catabolic process to creatine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.


go_id: GO:0019464
term: glycine decarboxylation via glycine cleavage system
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycine by oxidative cleavage to carbon dioxide, ammonia, and a methylene group, mediated by enzymes of the glycine cleavage complex.


go_id: GO:0019465
term: aspartate transamidation
ontology: BP
definition:
The exchange of the amino group of aspartate, the anion derived from aspartic acid, for another amino group.


go_id: GO:0019466
term: ornithine catabolic process via proline
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of ornithine, via the intermediate proline.


go_id: GO:0019468
term: nopaline catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.


go_id: GO:0019469
term: octopine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of octopine (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.


go_id: GO:0019470
term: 4-hydroxyproline catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.


go_id: GO:0019471
term: 4-hydroxyproline metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.


go_id: GO:0019472
term: 4-hydroxyproline biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline.


go_id: GO:0019473
term: L-lysine catabolic process to glutarate, by acetylation
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.


go_id: GO:0019474
term: L-lysine catabolic process to acetyl-CoA
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.


go_id: GO:0019475
term: L-lysine catabolic process to acetate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetate.


go_id: GO:0019476
term: D-lysine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.


go_id: GO:0019477
term: L-lysine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.


go_id: GO:0019478
term: D-amino acid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids.


go_id: GO:0019479
term: L-alanine oxidation to D-lactate and ammonia
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-alanine to D-lactate and ammonia.


go_id: GO:0019480
term: L-alanine oxidation to pyruvate via D-alanine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.


go_id: GO:0019482
term: beta-alanine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.


go_id: GO:0019483
term: beta-alanine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.


go_id: GO:0019484
term: beta-alanine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.


go_id: GO:0019485
term: beta-alanine catabolic process to L-alanine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including L-alanine.


go_id: GO:0019486
term: beta-alanine catabolic process to mevalonate semialdehyde, by transamination
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including mevalonate semialdehyde, by transamination.


go_id: GO:0019487
term: anaerobic acetylene catabolic process
ontology: BP
definition:
The chemical reactions and pathways involving acetylene, a colorless, volatile, explosive gas, that occur in the absence of oxygen.


go_id: GO:0019488
term: ribitol catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of ribitol to form xylulose 5-phosphate. Ribitol is initially converted to D-ribulose, which is phosphorylated to form ribulose 5-phosphate, which is then converted into xylulose 5-phosphate.


go_id: GO:0019489
term: methylgallate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.


go_id: GO:0019490
term: 2-aminobenzenesulfonate desulfonation
ontology: BP
definition:
The removal of the sulfonate group from 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.


go_id: GO:0019491
term: ectoine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.


go_id: GO:0019492
term: proline salvage
ontology: BP
definition:
Any process which produces the amino acid proline from derivatives of it, without de novo synthesis.


go_id: GO:0019493
term: arginine catabolic process to proline
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including proline.


go_id: GO:0019495
term: proline catabolic process to 2-oxoglutarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including 2-oxoglutarate.


go_id: GO:0019496
term: serine-isocitrate lyase pathway
ontology: BP
definition:
A one-carbon metabolic process in which acetyl-CoA is produced from formaldehyde and carbon dioxide.


go_id: GO:0019497
term: hexachlorocyclohexane metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving hexachlorocyclohexane, a cyclohexane derivative with 6 chlorine atoms attached to the hexane ring. Hexachlorocyclohexane consists of a mixture of 8 different isomers and was used a commercial insecticide. It is persistent in the environment, causing serious soil pollution.


go_id: GO:0019499
term: cyanide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration, reacting with the ferric form of cytochrome aa3 and thus blocking the electron transport chain.


go_id: GO:0019500
term: cyanide catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.


go_id: GO:0019501
term: arsonoacetate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arsonoacetate, a synthetic, organic compound containing a single arsenic atom.


go_id: GO:0019502
term: L-proline betaine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline found in alfalfa, chrysanthemum, and citrus plants.


go_id: GO:0019503
term: L-proline betaine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.


go_id: GO:0019504
term: L-proline betaine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.


go_id: GO:0019505
term: resorcinol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving resorcinol (C6H4(OH)2), a benzene derivative with many applications, including dyes, explosives, resins and as an antiseptic.


go_id: GO:0019506
term: phenylmercury acetate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.


go_id: GO:0019507
term: pyridine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.


go_id: GO:0019508
term: 2,5-dihydroxypyridine catabolic process to fumarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine to form fumarate. 2,5-dihydroxypyridine is dioxygenated to give maleamate and formate; the maleamate from this reaction is then converted to maleate, which is then isomerized to fumurate.


go_id: GO:0019510
term: S-adenosylhomocysteine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine.


go_id: GO:0019512
term: lactose catabolic process via tagatose-6-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate tagatose-6-phosphate.


go_id: GO:0019513
term: lactose catabolic process, using glucoside 3-dehydrogenase
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of lactose, catalyzed by the enzyme glucoside 3-dehydrogenase.


go_id: GO:0019515
term: lactose catabolic process via UDP-galactose
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate UDP-galactose.


go_id: GO:0019516
term: lactate oxidation
ontology: BP
definition:
The chemical reactions and pathways resulting in the conversion of lactate to other compounds, such as pyruvate, with concomitant loss of electrons.


go_id: GO:0019517
term: L-threonine catabolic process to D-lactate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L- threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound methylglyoxal, which is subsequently converted to D-lactate.


go_id: GO:0019518
term: L-threonine catabolic process to glycine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form to form 2-amino-3-oxobutanoate, which is subsequently converted to glycine.


go_id: GO:0019519
term: pentitol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving pentitols, any alditol with a chain of five carbon atoms in the molecule.


go_id: GO:0019520
term: aldonic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving aldonic acid, a monocarboxylic acid with a chain of three or more carbon atoms, derived from an aldose by oxidation of the aldehydic group.


go_id: GO:0019521
term: D-gluconate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.


go_id: GO:0019522
term: ketogluconate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.


go_id: GO:0019523
term: L-idonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.


go_id: GO:0019524
term: keto-D-gluconate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.


go_id: GO:0019525
term: keto-D-gluconate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.


go_id: GO:0019526
term: pentitol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of pentitols, any alditol with a chain of five carbon atoms in the molecule.


go_id: GO:0019527
term: pentitol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of pentitols, any alditol with a chain of five carbon atoms in the molecule.


go_id: GO:0019528
term: D-arabitol catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-arabitol to form xylulose 5-phosphate. D-arabitol is converted into D-xylulose, which is then phosphorylated to form D-xylulose-5-phosphate.


go_id: GO:0019529
term: taurine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.


go_id: GO:0019530
term: taurine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.


go_id: GO:0019531
term: oxalate transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of oxalate from one side of a membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.


go_id: GO:0019532
term: oxalate transport
ontology: BP
definition:
The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.


go_id: GO:0019533
term: cellobiose transport
ontology: BP
definition:
The directed movement of cellobiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.


go_id: GO:0019534
term: toxin transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of a toxin from one side of a membrane to the other. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.


go_id: GO:0019536
term: vibriobactin metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving vibriobactin, the major siderophore produced by Vibrio cholerae.


go_id: GO:0019537
term: vibriobactin biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.


go_id: GO:0019539
term: hydroxymate-containing siderophore biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a siderophore from other compounds, including hydroxamic acid. Hydroxamate is one of the three major chemical groups incorporated into siderophore structures with catechol and a-hydroxycarboxylate, each having a high selectivity for iron(3+).


go_id: GO:0019540
term: catechol-containing siderophore biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of a siderophore from other compounds, including catechol. Catechol is one of the three major chemical groups incorporated into siderophore structures with hydroxamate and a-hydroxycarboxylate, each having a high selectivity for iron(3+).


go_id: GO:0019541
term: propionate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.


go_id: GO:0019542
term: propionate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.


go_id: GO:0019543
term: propionate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid.


go_id: GO:0019544
term: arginine catabolic process to glutamate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including glutamate.


go_id: GO:0019545
term: arginine catabolic process to succinate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including succinate.


go_id: GO:0019546
term: arginine deiminase pathway
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine and CO2, using the enzyme arginine deiminase.


go_id: GO:0019547
term: arginine catabolic process to ornithine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.


go_id: GO:0019548
term: arginine catabolic process to spermine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.


go_id: GO:0019549
term: glutamate catabolic process to succinate via succinate semialdehyde
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.


go_id: GO:0019550
term: glutamate catabolic process to aspartate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate.


go_id: GO:0019551
term: glutamate catabolic process to 2-oxoglutarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including 2-oxoglutarate.


go_id: GO:0019552
term: glutamate catabolic process via 2-hydroxyglutarate
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-hydroxyglutarate, yielding energy in the form of ATP.


go_id: GO:0019553
term: glutamate catabolic process via L-citramalate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-citramalate.


go_id: GO:0019554
term: glutamate catabolic process to oxaloacetate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including oxaloacetate.


go_id: GO:0019555
term: glutamate catabolic process to ornithine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including ornithine.


go_id: GO:0019556
term: histidine catabolic process to glutamate and formamide
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formamide.


go_id: GO:0019557
term: histidine catabolic process to glutamate and formate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formate.


go_id: GO:0019558
term: histidine catabolic process to 2-oxoglutarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including 2-oxoglutarate.


go_id: GO:0019559
term: histidine catabolic process to imidazol-5-yl-lactate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including imidazol-5-yl-lactate.


go_id: GO:0019560
term: histidine catabolic process to hydantoin-5-propionate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including hydantoin-5-propionate.


go_id: GO:0019561
term: anaerobic phenylalanine oxidation
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phenylalanine under anaerobic conditions; occurs via the intermediates phenylpyruvate and phenylacetaldehyde.


go_id: GO:0019563
term: glycerol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.


go_id: GO:0019564
term: aerobic glycerol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.


go_id: GO:0019566
term: arabinose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving arabinose, arabino-pentose. L-Arabinose occurs both free, for example in the heartwood of many conifers, and in the combined state, as a constituent of plant hemicelluloses, bacterial polysaccharides etc. D-arabinose is a constituent of arabinonucleosides.


go_id: GO:0019569
term: L-arabinose catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including xylulose 5-phosphate.


go_id: GO:0019570
term: L-arabinose catabolic process to 2-oxoglutarate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-arabinose into other compounds, including 2-oxoglutarate.


go_id: GO:0019571
term: D-arabinose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose.


go_id: GO:0019572
term: L-arabinose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-arabinose, the L-enantiomer of arabino-pentose.


go_id: GO:0019573
term: D-arabinose catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of D-arabinose to form xylulose 5-phosphate. D-arabinose is converted into D-ribulose, which is phosphorylated to ribulose-5-phosphate, which is isomerized to give D-xylulose-5-phosphate.


go_id: GO:0019574
term: sucrose catabolic process via 3'-ketosucrose
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds via the conversion of sucrose to 3'-ketosucrose. 3'-ketosucrose is hydrolyzed to 3-ketoglucose and fructose, and the 3-ketoglucose is then be converted to glucose.


go_id: GO:0019576
term: aerobic fructose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.


go_id: GO:0019577
term: aldaric acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.


go_id: GO:0019578
term: aldaric acid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.


go_id: GO:0019579
term: aldaric acid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.


go_id: GO:0019580
term: galactarate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.


go_id: GO:0019583
term: galactonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving galactonate, the anion of galactonic acid, an organic acid derived from the sugar galactose.


go_id: GO:0019584
term: galactonate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of galactonate, the anion of galactonic acid.


go_id: GO:0019585
term: glucuronate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.


go_id: GO:0019586
term: galacturonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving galacturonate, the anion of galacturonic acid, the uronic acid formally derived from galactose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.


go_id: GO:0019588
term: anaerobic glycerol catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol, yielding energy in the form of ATP.


go_id: GO:0019589
term: anaerobic glycerol catabolic process to propane-1,3-diol
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.


go_id: GO:0019590
term: L-arabitol catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-arabitol to form xylulose 5-phosphate. L-arabitol is converted into L-xylulose, which is then phosphorylated to L-xylulose-5-phosphate. This is converted to D-xylulose-5-phosphate via the intermediate L-ribulose-5-phosphate.


go_id: GO:0019592
term: mannitol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.


go_id: GO:0019593
term: mannitol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.


go_id: GO:0019594
term: mannitol metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.


go_id: GO:0019595
term: non-phosphorylated glucose catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of non-phosphorylated forms of glucose.


go_id: GO:0019596
term: mandelate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.


go_id: GO:0019597
term: (R)-mandelate catabolic process to benzoate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including benzoate.


go_id: GO:0019598
term: (R)-mandelate catabolic process to catechol
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including catechol.


go_id: GO:0019599
term: (R)-4-hydroxymandelate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of (R)-4-hydroxymandelate, the anion of (R)-4-hydroxymandelic acid.


go_id: GO:0019600
term: toluene oxidation
ontology: BP
definition:
The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in toluene.


go_id: GO:0019601
term: toluene oxidation via 2-hydroxytoluene
ontology: BP
definition:
The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 2-hydroxytoluene (o-cresol).


go_id: GO:0019602
term: toluene oxidation via 3-hydroxytoluene
ontology: BP
definition:
The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).


go_id: GO:0019603
term: toluene oxidation via 4-hydroxytoluene
ontology: BP
definition:
The degradation of toluene to form p-hydroxybenzoate; the first step in the pathway is the oxidation of toluene to form 4-hydroxytoluene (4-cresol).


go_id: GO:0019604
term: toluene oxidation to catechol
ontology: BP
definition:
The formation from toluene of catechol, dihydroxybenzene, by successive oxidations followed by loss of carbon dioxide (CO2).


go_id: GO:0019605
term: butyrate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.


go_id: GO:0019606
term: 2-oxobutyrate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.


go_id: GO:0019607
term: phenylethylamine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.


go_id: GO:0019608
term: nicotine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.


go_id: GO:0019609
term: 3-hydroxyphenylacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.


go_id: GO:0019610
term: 3-hydroxyphenylacetate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.


go_id: GO:0019611
term: 4-toluenecarboxylate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.


go_id: GO:0019612
term: 4-toluenecarboxylate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.


go_id: GO:0019614
term: catechol-containing compound catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.


go_id: GO:0019615
term: catechol catabolic process, ortho-cleavage
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.


go_id: GO:0019616
term: catechol catabolic process, meta-cleavage
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of catechol via the meta-cleavage pathway, in which the catechol aromatic ring is broken between a hydroxylated carbon atom and an adjacent unsubstituted carbon atom.


go_id: GO:0019617
term: protocatechuate catabolic process, meta-cleavage
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.


go_id: GO:0019618
term: protocatechuate catabolic process, ortho-cleavage
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield beta-ketoadipate.


go_id: GO:0019620
term: aerobic benzoate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the presence of oxygen.


go_id: GO:0019621
term: creatinine catabolic process to formate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of creatinine into other compounds, including formate.


go_id: GO:0019622
term: 3-(3-hydroxy)phenylpropionate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.


go_id: GO:0019623
term: atrazine catabolic process to urea
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into urea.


go_id: GO:0019624
term: atrazine catabolic process to isopropylamine
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into isopropylamine.


go_id: GO:0019625
term: atrazine catabolic process to cyanuric acid
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into cyanuric acid.


go_id: GO:0019626
term: short-chain fatty acid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of fatty acids with a chain length of less than C6.


go_id: GO:0019628
term: urate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of urate, the anion of uric acid, 2,6,8-trioxypurine.


go_id: GO:0019629
term: propionate catabolic process, 2-methylcitrate cycle
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.


go_id: GO:0019630
term: quinate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.


go_id: GO:0019631
term: quinate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.


go_id: GO:0019632
term: shikimate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids.


go_id: GO:0019633
term: shikimate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid.


go_id: GO:0019634
term: organic phosphonate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.


go_id: GO:0019635
term: 2-aminoethylphosphonate catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 2-aminoethylphosphonate, also known as ciliatine.


go_id: GO:0019636
term: phosphonoacetate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving phosphonoacetate, C2H4PO5, a substance composed of an acetate and a phosphonic acid residue.


go_id: GO:0019637
term: organophosphate metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving organophosphates, any phosphate-containing organic compound.


go_id: GO:0019638
term: 6-hydroxycineole metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.


go_id: GO:0019639
term: 6-hydroxycineole catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.


go_id: GO:0019640
term: glucuronate catabolic process to xylulose 5-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of glucuronate into other compounds, including xylulose 5-phosphate.


go_id: GO:0019643
term: reductive tricarboxylic acid cycle
ontology: BP
definition:
A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.


go_id: GO:0019645
term: anaerobic electron transport chain
ontology: BP
definition:
A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors other than oxygen to generate a transmembrane electrochemical gradient.


go_id: GO:0019646
term: aerobic electron transport chain
ontology: BP
definition:
A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.


go_id: GO:0019647
term: formaldehyde assimilation via ribulose monophosphate cycle
ontology: BP
definition:
The pathway in which formaldehyde is used as a carbon source in the ribulose monophosphate cycle. Methanotrophic bacteria produce formaldehyde from the oxidation of methane and methanol, and then assimilate it via the ribulose monophosphate cycle to form intermediates of the central metabolic routes that are subsequently used for biosynthesis of cell material. Three molecules of formaldehyde are assimilated, forming a three-carbon intermediate of central metabolism; in this pathway, all cellular carbon is assimilated at the oxidation level of formaldehyde.


go_id: GO:0019648
term: formaldehyde assimilation via xylulose monophosphate cycle
ontology: BP
definition:
The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.


go_id: GO:0019650
term: glycolytic fermentation to butanediol
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.


go_id: GO:0019651
term: citrate catabolic process to diacetyl
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of citrate to diacetyl, yielding energy in the form of ATP.


go_id: GO:0019652
term: lactate fermentation to propionate and acetate
ontology: BP
definition:
The anaerobic enzymatic conversion of lactate to propionate, concomitant with the oxidation of lactate to acetate and CO2 and yielding energy in the form of adenosine triphosphate (ATP).


go_id: GO:0019653
term: anaerobic purine nucleobase catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.


go_id: GO:0019654
term: acetate fermentation
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of acetate, yielding energy in the form of ATP.


go_id: GO:0019655
term: glycolytic fermentation to ethanol
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.


go_id: GO:0019656
term: glucose catabolic process to D-lactate and ethanol
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the enzymatic breakdown of D-glucose to D-lactate and ethanol, yielding energy in the form of adenosine triphosphate (ATP) at the rate of one ATP per glucose molecule.


go_id: GO:0019657
term: glycolytic fermentation to propionate
ontology: BP
definition:
Glycolytic fermentation resulting in the catabolism of glucose to propionate, yielding energy in the form of ATP; an alternative to the acrylate pathway to produce propionate.


go_id: GO:0019658
term: glucose fermentation to lactate and acetate
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.


go_id: GO:0019659
term: glucose catabolic process to lactate
ontology: BP
definition:
The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, and possibly ethanol, yielding energy in the form of adenosine triphosphate (ATP).


go_id: GO:0019660
term: glycolytic fermentation
ontology: BP
definition:
Fermentation that includes the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.


go_id: GO:0019661
term: glucose catabolic process to lactate via pyruvate
ontology: BP
definition:
The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, via canonical glycolysis, yielding energy in the form of adenosine triphosphate (ATP).


go_id: GO:0019662
term: non-glycolytic fermentation
ontology: BP
definition:
Fermentation that does not include the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.


go_id: GO:0019664
term: mixed acid fermentation
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into ethanol, lactate, formate, succinate, and acetate, yielding energy in the form of ATP.


go_id: GO:0019665
term: anaerobic amino acid catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids, yielding energy in the form of ATP.


go_id: GO:0019666
term: nitrogenous compound fermentation
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of a nitrogen-containing compound, yielding energy in the form of ATP.


go_id: GO:0019667
term: anaerobic L-alanine catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of L-alanine, yielding energy in the form of ATP.


go_id: GO:0019668
term: anaerobic catabolism of pairs of amino acids
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.


go_id: GO:0019669
term: anaerobic glycine catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glycine, yielding energy in the form of ATP.


go_id: GO:0019670
term: anaerobic glutamate catabolic process
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, yielding energy in the form of ATP.


go_id: GO:0019671
term: glutamate catabolic process via mesaconate and citramalate
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate via the intermediates mesaconate and S-citramalate, yielding energy in the form of ATP.


go_id: GO:0019672
term: ethanol-acetate fermentation to butyrate and caproate
ontology: BP
definition:
The anaerobic chemical reactions and pathways resulting in the breakdown of ethanol and acetate to butyrate and caproate, yielding energy in the form of ATP.


go_id: GO:0019673
term: GDP-mannose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.


go_id: GO:0019674
term: NAD metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.


go_id: GO:0019676
term: ammonia assimilation cycle
ontology: BP
definition:
The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment, glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen.


go_id: GO:0019677
term: NAD catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; catabolism may be of either the oxidized form, NAD, or the reduced form, NADH.


go_id: GO:0019680
term: L-methylmalonyl-CoA biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA.


go_id: GO:0019681
term: acetyl-CoA assimilation pathway
ontology: BP
definition:
The pathways by which acetyl-CoA is processed and converted into alpha-ketoglutarate (2-oxoglutarate); methanogenic archaea use these pathways to assimilate acetyl-CoA into the cell.


