available.db0pkgs available.db0pkgs generateSeqnames.db Generates the seqnames.db package and database getProbeDataAffy Read a data file describing the probe sequences on an Affymetrix genechip getProbeData_1lq Read a 1lq file for an Affymetrix genechip makeAnnDbPkg Create an SQLite-based annotation package makeChipPackage Making a chip package from annotations available from data.frame of probes mapped to gene IDs and an existing org package. makeDBPackage Creates a sqlite database, and then makes an annotation package with it makeInpDb Builds an individual DB from online files at inparanoid that is in turn meant for generating Inparanoid 8 based objects. makeOrgPackage Making an organism package from annotations available from a set of named data.frames. makeOrgPackageFromNCBI Make an organism package from annotations available from NCBI. makeProbePackage Make a package with probe sequence related data for microarrays populateDB Populates an SQLite DB with and produces a schema definition wrapBaseDBPackages Wrap up all the Base Databases into Packages for distribution