\name{@ANNOBJPREFIX@FLYBASECG} \alias{@ANNOBJPREFIX@FLYBASECG} \alias{@ANNOBJPREFIX@FLYBASECG2EG} \title{Map FlyBase CG Acession numbers with Entrez Gene identifiers} \description{ @ANNOBJPREFIX@FLYBASE is an R object that contains mappings between Entrez Gene identifiers and FlyBase CG accession numbers. These accessions are used by ensembl and supported by flybase. } \details{ This object is a simple mapping of Entrez Gene identifiers \url{https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene} to Flybase CG accession numbers. Mappings were based on data provided by: @FLYBASESOURCE@ } \seealso{ \itemize{ \item \code{\link[AnnotationDbi]{AnnotationDb-class}} for use of the \code{select()} interface. } } \examples{ ## select() interface: ## Objects in this package can be accessed using the select() interface ## from the AnnotationDbi package. See ?select for details. ## Bimap interface: x <- @ANNOBJPREFIX@FLYBASECG # Get the entrez gene IDs that are mapped to a Flybase CG ID mapped_genes <- mappedkeys(x) # Convert to a list xx <- as.list(x[mapped_genes]) if(length(xx) > 0) { # Get the FlyBase CG IDs for the first five genes xx[1:5] # Get the first one xx[[1]] } #For the reverse map FLYBASECG2EG: # Convert to a list xx <- as.list(@ANNOBJPREFIX@FLYBASECG2EG) if(length(xx) > 0){ # Gets the entrez gene IDs for the first five FlyBase CG IDs xx[1:5] # Get the first one xx[[1]] } } \keyword{datasets}