FastQCFastQC Report
Mon 24 Feb 2025
POC-52-TP3_R1_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenamePOC-52-TP3_R1_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17900178
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length15-135
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAATTAAAATGTAGCATCTTCACTACAGATTTAATTTCATTGAATATTT265430.14828344165069196No Hit
AACAATTAAAATGTAGCATCTTCACTACAGATTTAATTTCATTGAATATT248550.13885336782684507No Hit
ACCGGTCAACAATTAATTGACAATTGATTACGCTACATTATCACAGTCAG184120.10285931234873755No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)