Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 1A3_R1_001 1A3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38533665.0 5.7 Gbp 0.0 150.0 73.0 11.030103318145862 150.0 150 pass warn warn pass fail fail pass pass fail fail fail 1A3_R2_001 1A3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 38533665.0 5.7 Gbp 0.0 150.0 72.0 9.892184357367546 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1A4_R1_001 1A4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13294987.0 1.9 Gbp 0.0 150.0 66.0 14.631532329927277 150.0 150 pass fail pass pass fail warn pass pass fail fail fail 1A4_R2_001 1A4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13294987.0 1.9 Gbp 0.0 150.0 69.0 13.933704365067875 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1A5_R1_001 1A5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19358871.0 2.9 Gbp 0.0 150.0 75.0 17.614936975633118 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1A5_R2_001 1A5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19358871.0 2.9 Gbp 0.0 150.0 70.0 16.61527291403647 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1A6_R1_001 1A6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17047223.0 2.5 Gbp 0.0 150.0 69.0 18.326219557906214 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1A6_R2_001 1A6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17047223.0 2.5 Gbp 0.0 150.0 69.0 17.238796896669207 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B11_R1_001 1B11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8998647.0 1.3 Gbp 0.0 150.0 69.0 22.299843421433376 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1B11_R2_001 1B11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 8998647.0 1.3 Gbp 0.0 150.0 69.0 20.440923281837016 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1B12_R1_001 1B12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10477798.0 1.5 Gbp 0.0 150.0 68.0 15.981562098830354 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1B12_R2_001 1B12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10477798.0 1.5 Gbp 0.0 150.0 68.0 15.046059768992873 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1B8_R1_001 1B8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9848817.0 1.4 Gbp 0.0 150.0 68.0 13.844851275565468 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1B8_R2_001 1B8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9848817.0 1.4 Gbp 0.0 150.0 70.0 13.705539533388183 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1C1_R1_001 1C1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18542786.0 2.7 Gbp 0.0 150.0 71.0 18.073954014842204 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 1C1_R2_001 1C1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18542786.0 2.7 Gbp 0.0 150.0 70.0 17.902924694985977 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1C2_R1_001 1C2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17964160.0 2.6 Gbp 0.0 150.0 69.0 15.784312882741434 150.0 150 pass fail pass pass fail warn pass pass fail fail fail 1C2_R2_001 1C2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17964160.0 2.6 Gbp 0.0 150.0 69.0 15.627229279383734 150.0 150 pass pass warn pass fail warn pass pass fail fail fail 1C3_R1_001 1C3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19105567.0 2.8 Gbp 0.0 150.0 68.0 10.52443854521381 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 1C3_R2_001 1C3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19105567.0 2.8 Gbp 0.0 150.0 68.0 10.309648740593582 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1C7_R1_001 1C7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11471279.0 1.7 Gbp 0.0 150.0 69.0 13.975582012387044 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1C7_R2_001 1C7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11471279.0 1.7 Gbp 0.0 150.0 69.0 13.954211998011942 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1C8_R1_001 1C8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10703093.0 1.6 Gbp 0.0 150.0 67.0 9.843725444843262 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1C8_R2_001 1C8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10703093.0 1.6 Gbp 0.0 150.0 68.0 10.20770045224801 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1C9_R1_001 1C9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11672498.0 1.7 Gbp 0.0 150.0 68.0 12.96459011319771 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1C9_R2_001 1C9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11672498.0 1.7 Gbp 0.0 150.0 69.0 11.779581271078573 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1D11_R1_001 1D11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12285541.0 1.8 Gbp 0.0 150.0 71.0 21.3129982716948 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1D11_R2_001 1D11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12285541.0 1.8 Gbp 0.0 150.0 70.0 20.377614753243297 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E10_R1_001 1E10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12332113.0 1.8 Gbp 0.0 150.0 68.0 11.647338150314738 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1E10_R2_001 1E10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12332113.0 1.8 Gbp 0.0 150.0 70.0 11.033545457064639 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1E11_R1_001 1E11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9776022.0 1.4 Gbp 0.0 150.0 67.0 20.771255112373645 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1E11_R2_001 1E11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9776022.0 1.4 Gbp 0.0 150.0 70.0 19.675792174410518 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E12_R1_001 1E12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11655061.0 1.7 Gbp 0.0 150.0 67.0 13.535700098467682 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1E12_R2_001 1E12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11655061.0 1.7 Gbp 0.0 150.0 70.0 12.761794868548183 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E4_R1_001 1E4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18793445.0 2.8 Gbp 0.0 150.0 69.0 8.539558299289409 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 1E4_R2_001 1E4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18793445.0 2.8 Gbp 0.0 150.0 68.0 8.265112114964174 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E6_R1_001 1E6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21624116.0 3.2 Gbp 0.0 150.0 66.0 8.220962529356061 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1E6_R2_001 1E6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21624116.0 3.2 Gbp 0.0 150.0 67.0 8.09170030759753 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1E8_R1_001 1E8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11714767.0 1.7 Gbp 0.0 150.0 72.0 12.964590654216307 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1E8_R2_001 1E8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11714767.0 1.7 Gbp 0.0 150.0 70.0 12.260363519260281 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1F2_R1_001 1F2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17902750.0 2.6 Gbp 0.0 150.0 68.0 14.423432391321334 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1F2_R2_001 1F2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17902750.0 2.6 Gbp 0.0 150.0 67.0 13.878394410217505 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1F5_R1_001 1F5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17824415.0 2.6 Gbp 0.0 150.0 70.0 12.120188259457954 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1F5_R2_001 1F5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17824415.0 2.6 Gbp 0.0 150.0 68.0 11.83514075001903 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1F9_R1_001 1F9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13133636.0 1.9 Gbp 0.0 150.0 73.0 13.128748906704555 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1F9_R2_001 1F9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13133636.0 1.9 Gbp 0.0 150.0 70.0 12.13158419842417 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G11_R1_001 1G11_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10305459.0 1.5 Gbp 0.0 150.0 67.0 16.906937043117793 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1G11_R2_001 1G11_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10305459.0 1.5 Gbp 0.0 150.0 70.0 16.072891249159053 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G12_R1_001 1G12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10878910.0 1.6 Gbp 0.0 150.0 68.0 22.399192295514688 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1G12_R2_001 1G12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10878910.0 1.6 Gbp 0.0 150.0 70.0 21.294065684234013 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G2_R1_001 1G2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19974557.0 2.9 Gbp 0.0 150.0 71.0 25.29361839896755 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 1G2_R2_001 1G2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19974557.0 2.9 Gbp 0.0 150.0 70.0 24.234838173307526 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G4_R1_001 1G4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14191758.0 2.1 Gbp 0.0 150.0 68.0 17.332312884979203 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1G4_R2_001 1G4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14191758.0 2.1 Gbp 0.0 150.0 69.0 16.611052162144148 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G6_R1_001 1G6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21447519.0 3.2 Gbp 0.0 150.0 71.0 11.124894865035634 150.0 150 pass fail pass pass fail pass pass pass fail fail fail 1G6_R2_001 1G6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21447519.0 3.2 Gbp 0.0 150.0 71.0 10.323148119188687 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G7_R1_001 1G7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11782742.0 1.7 Gbp 0.0 150.0 67.0 13.219403701941628 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 1G7_R2_001 1G7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11782742.0 1.7 Gbp 0.0 150.0 69.0 13.122775916845658 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1G8_R1_001 1G8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11485434.0 1.7 Gbp 0.0 150.0 69.0 13.374646722884648 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1G8_R2_001 1G8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11485434.0 1.7 Gbp 0.0 150.0 70.0 12.400718617989861 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1G9_R1_001 1G9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15868698.0 2.3 Gbp 0.0 150.0 73.0 11.15718303608282 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1G9_R2_001 1G9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15868698.0 2.3 Gbp 0.0 150.0 71.0 10.55719892837435 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 1H10_R1_001 1H10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10880563.0 1.6 Gbp 0.0 150.0 71.0 16.269020109004746 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 1H10_R2_001 1H10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 10880563.0 1.6 Gbp 0.0 150.0 71.0 15.185007907028409 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1H4_R1_001 1H4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15304850.0 2.2 Gbp 0.0 150.0 70.0 11.472952130200714 150.0 150 pass fail warn pass fail pass pass pass fail fail fail 1H4_R2_001 1H4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 15304850.0 2.2 Gbp 0.0 150.0 68.0 10.788852319229852 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1H5_R1_001 1H5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16315491.0 2.4 Gbp 0.0 150.0 74.0 19.426767192391807 150.0 150 pass warn fail pass fail fail pass pass fail fail fail 1H5_R2_001 1H5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16315491.0 2.4 Gbp 0.0 150.0 71.0 18.914832680318113 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 1H9_R1_001 1H9_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12904321.0 1.9 Gbp 0.0 150.0 73.0 9.17710603073487 150.0 150 pass fail fail pass fail pass pass pass fail fail fail 1H9_R2_001 1H9_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 12904321.0 1.9 Gbp 0.0 150.0 71.0 8.443769455200727 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 2A1_R1_001 2A1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13757374.0 2 Gbp 0.0 150.0 74.0 16.13494144540189 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 2A1_R2_001 2A1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13757374.0 2 Gbp 0.0 150.0 70.0 15.571620039367149 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2A2_R1_001 2A2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14820582.0 2.2 Gbp 0.0 150.0 69.0 10.243619360123619 150.0 150 pass fail warn pass fail fail pass pass fail fail fail 2A2_R2_001 2A2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14820582.0 2.2 Gbp 0.0 150.0 68.0 10.134854062956935 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2C3_R1_001 2C3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23813975.0 3.5 Gbp 0.0 150.0 69.0 14.379077011281218 150.0 150 pass fail pass pass fail warn pass pass fail fail fail 2C3_R2_001 2C3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23813975.0 3.5 Gbp 0.0 150.0 70.0 13.364818794493456 150.0 150 pass pass pass pass fail fail pass pass fail fail fail 2G2_R1_001 2G2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19759778.0 2.9 Gbp 0.0 150.0 70.0 13.88436978197688 150.0 150 pass fail warn pass fail warn pass pass fail fail fail 2G2_R2_001 2G2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19759778.0 2.9 Gbp 0.0 150.0 70.0 12.927880746479389 150.0 150 pass pass pass pass fail fail pass pass fail fail fail