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"CCCAA":108083, "CCCAT":44312, "CCCAC":56318, "CCCAG":30392, "CCCTA":31254, "CCCTT":140729, "CCCTC":61238, "CCCTG":24806, "CCCCA":75365, "CCCCT":76897, "CCCCC":112734, "CCCCG":16538, "CCCGA":27412, "CCCGT":24766, "CCCGC":9653, "CCCGG":14576, "CCGAA":60907, "CCGAT":27779, "CCGAC":13618, "CCGAG":34928, "CCGTA":28625, "CCGTT":77937, "CCGTC":22358, "CCGTG":25540, "CCGCA":11749, "CCGCT":13870, "CCGCC":8985, "CCGCG":11414, "CCGGA":31531, "CCGGT":31057, "CCGGC":7952, "CCGGG":22993, "CGAAA":1165191, "CGAAT":979006, "CGAAC":122440, "CGAAG":694131, "CGATA":1127007, "CGATT":1784914, "CGATC":145355, "CGATG":620423, "CGACA":32571, "CGACT":41134, "CGACC":15907, "CGACG":231921, "CGAGA":560000, "CGAGT":799269, "CGAGC":78391, "CGAGG":471381, "CGTAA":1310848, "CGTAT":1584667, "CGTAC":119886, "CGTAG":870998, "CGTTA":1933836, "CGTTT":3704877, "CGTTC":277562, "CGTTG":1216338, "CGTCA":49708, "CGTCT":746008, "CGTCC":20521, "CGTCG":425843, "CGTGA":657189, "CGTGT":958351, "CGTGC":71136, "CGTGG":551401, "CGCAA":32340, "CGCAT":20833, "CGCAC":13573, "CGCAG":25500, "CGCTA":19813, "CGCTT":49092, "CGCTC":13617, "CGCTG":23569, "CGCCA":12597, "CGCCT":14176, "CGCCC":8425, "CGCCG":10816, "CGCGA":267633, "CGCGT":399937, "CGCGC":60370, "CGCGG":196367, "CGGAA":1606963, "CGGAT":708688, "CGGAC":63236, "CGGAG":416280, "CGGTA":903281, "CGGTT":1556636, "CGGTC":118249, "CGGTG":575031, "CGGCA":16463, "CGGCT":20740, "CGGCC":8435, "CGGCG":213027, "CGGGA":409201, "CGGGT":609623, "CGGGC":47441, "CGGGG":377856, "GAAAA":26373938, "GAAAT":26517827, "GAAAC":455156, "GAAAG":11583578, "GAATA":17378616, "GAATT":28314235, "GAATC":281030, "GAATG":10695553, "GAACA":181127, "GAACT":814168, "GAACC":45994, "GAACG":523016, "GAAGA":11220540, "GAAGT":13289004, "GAAGC":184476, "GAAGG":6269690, "GATAA":19131770, "GATAT":22816507, "GATAC":250528, "GATAG":10342019, "GATTA":23046855, "GATTT":44786597, "GATTC":516574, "GATTG":16620496, "GATCA":80169, "GATCT":380462, "GATCC":22264, "GATCG":1852676, "GATGA":11990938, "GATGT":15925949, "GATGC":136202, "GATGG":7039543, "GACAA":117854, "GACAT":84130, "GACAC":34398, "GACAG":56802, "GACTA":74248, "GACTT":192153, "GACTC":39260, "GACTG":72943, "GACCA":29631, "GACCT":24853, "GACCC":16329, "GACCG":21276, "GACGA":536005, "GACGT":761760, "GACGC":63202, "GACGG":345891, "GAGAA":10246640, "GAGAT":10820375, "GAGAC":153445, "GAGAG":5918321, "GAGTA":9775416, "GAGTT":18212555, "GAGTC":218976, "GAGTG":6994348, "GAGCA":900410, "GAGCT":52844, "GAGCC":27188, "GAGCG":378736, "GAGGA":5914431, "GAGGT":8409963, "GAGGC":117200, "GAGGG":4328946, "GTAAA":26138756, "GTAAT":26944728, "GTAAC":372664, "GTAAG":12238901, "GTATA":22443541, "GTATT":39575202, "GTATC":459194, "GTATG":14831079, "GTACA":95243, "GTACT":137378, "GTACC":22494, "GTACG":779765, "GTAGA":10752122, "GTAGT":18776232, "GTAGC":244795, "GTAGG":7270869, "GTTAA":31310507, "GTTAT":44629757, "GTTAC":537516, "GTTAG":17541189, "GTTTA":44281438, "GTTTT":97421124, "GTTTC":1678966, "GTTTG":33146306, "GTTCA":358302, "GTTCT":569040, "GTTCC":81183, "GTTCG":1525091, "GTTGA":18924603, "GTTGT":33690264, "GTTGC":325781, "GTTGG":12770723, "GTCAA":190317, "GTCAT":140668, "GTCAC":522291, "GTCAG":81019, "GTCTA":114376, "GTCTT":317591, "GTCTC":55065, "GTCTG":782985, "GTCCA":31468, "GTCCT":54088, "GTCCC":26921, "GTCCG":22208, "GTCGA":875273, "GTCGT":1544946, "GTCGC":112323, "GTCGG":652873, "GTGAA":13559686, "GTGAT":17741292, "GTGAC":193340, "GTGAG":7029204, "GTGTA":15739552, "GTGTT":29570615, "GTGTC":330664, "GTGTG":12005780, "GTGCA":50592, "GTGCT":68224, "GTGCC":13948, "GTGCG":416956, "GTGGA":7851676, "GTGGT":12824306, "GTGGC":156912, "GTGGG":5499681, "GCAAA":125375, "GCAAT":72995, "GCAAC":38360, "GCAAG":51276, "GCATA":66545, "GCATT":94965, "GCATC":17741, "GCATG":47077, "GCACA":843864, "GCACT":28638, "GCACC":15940, "GCACG":22414, "GCAGA":46172, "GCAGT":59991, "GCAGC":24301, "GCAGG":37003, "GCTAA":67492, "GCTAT":84156, "GCTAC":21814, "GCTAG":38756, "GCTTA":85089, "GCTTT":244218, "GCTTC":42269, "GCTTG":79656, "GCTCA":21964, "GCTCT":34575, "GCTCC":14539, "GCTCG":17895, "GCTGA":59700, "GCTGT":88167, "GCTGC":20423, "GCTGG":48930, "GCCAA":33402, "GCCAT":24465, "GCCAC":20035, "GCCAG":13908, "GCCTA":16712, "GCCTT":43222, "GCCTC":14520, "GCCTG":22337, "GCCCA":19159, "GCCCT":15522, "GCCCC":13350, "GCCCG":10295, "GCCGA":25654, "GCCGT":24445, "GCCGC":10412, "GCCGG":10752, "GCGAA":650377, "GCGAT":818703, "GCGAC":69296, "GCGAG":419338, "GCGTA":761765, "GCGTT":1367537, "GCGTC":102636, "GCGTG":478998, "GCGCA":25378, "GCGCT":21845, "GCGCC":8263, "GCGCG":242743, "GCGGA":383357, "GCGGT":679806, "GCGGC":65192, "GCGGG":316044, "GGAAA":13904476, "GGAAT":11714707, "GGAAC":215705, "GGAAG":7313391, "GGATA":10238019, "GGATT":16129150, "GGATC":199871, "GGATG":7074686, "GGACA":65092, "GGACT":84950, "GGACC":16822, "GGACG":361134, "GGAGA":5976243, "GGAGT":7429422, "GGAGC":112460, "GGAGG":4562632, "GGTAA":13642834, "GGTAT":15342909, "GGTAC":210538, "GGTAG":7571722, "GGTTA":20039055, "GGTTT":34336855, "GGTTC":581163, "GGTTG":13250619, "GGTCA":94402, "GGTCT":118856, "GGTCC":25779, "GGTCG":709262, "GGTGA":8279270, "GGTGT":11734781, "GGTGC":126439, "GGTGG":6439411, "GGCAA":62433, "GGCAT":49346, "GGCAC":17330, "GGCAG":35341, "GGCTA":47875, "GGCTT":93204, "GGCTC":19106, "GGCTG":48630, "GGCCA":19175, "GGCCT":19200, "GGCCC":9652, "GGCCG":18565, "GGCGA":438924, "GGCGT":576067, "GGCGC":68972, "GGCGG":353645, "GGGAA":6915249, "GGGAT":7262907, "GGGAC":121288, "GGGAG":4183050, "GGGTA":7477171, "GGGTT":13884202, "GGGTC":208550, "GGGTG":5658209, "GGGCA":39365, "GGGCT":51261, "GGGCC":12870, "GGGCG":292928, "GGGGA":4297417, "GGGGT":6604887, "GGGGC":105802, "GGGGG":10235634 }, "overrepresented_sequences": { } }, "read2_before_filtering": { "total_reads": 47827252, "total_bases": 7174087800, "q20_bases": 6952902705, "q30_bases": 6670197631, "total_cycles": 150, "quality_curves": { 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"CCTCC":4829046, "CCTCG":422226, "CCTGA":44183, "CCTGT":50141, "CCTGC":34739, "CCTGG":16176, "CCCAA":14072115, "CCCAT":6445446, "CCCAC":5865458, "CCCAG":67704, "CCCTA":8241444, "CCCTT":6820593, "CCCTC":4619791, "CCCTG":42020, "CCCCA":6365851, "CCCCT":4949698, "CCCCC":7418577, "CCCCG":315818, "CCCGA":618766, "CCCGT":314781, "CCCGC":295445, "CCCGG":15352, "CCGAA":1520696, "CCGAT":717640, "CCGAC":574923, "CCGAG":20832, "CCGTA":709433, "CCGTT":596590, "CCGTC":339225, "CCGTG":46557, "CCGCA":429614, "CCGCT":398001, "CCGCC":338242, "CCGCG":175830, "CCGGA":21672, "CCGGT":15535, "CCGGC":11322, "CCGGG":11366, "CGAAA":3744752, "CGAAT":1523694, "CGAAC":1311594, "CGAAG":112221, "CGATA":1672190, "CGATT":1038307, "CGATC":739076, "CGATG":24377, "CGACA":1029435, "CGACT":793826, "CGACC":649573, "CGACG":390916, "CGAGA":54175, "CGAGT":29568, "CGAGC":25479, "CGAGG":29376, "CGTAA":1692395, "CGTAT":891718, "CGTAC":694459, "CGTAG":36927, "CGTTA":1027145, "CGTTT":892784, "CGTTC":462980, "CGTTG":41375, 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"C":[39.5244,39.5202,39.5292,39.524,39.5194,39.5109,39.5082,39.5068,39.5019,39.498,39.4427,39.4404,39.4452,39.4384,39.4251,39.4169,39.4086,39.4014,39.3959,39.3958,39.3859,39.3769,39.3594,39.3493,39.3387,39.332,39.3293,39.3077,39.2974,39.2873,39.2733,39.2665,39.2494,39.2377,39.2197,39.2064,39.1881,39.1779,39.1597,39.1397,39.1295,39.1107,39.0961,39.0766,39.0575,39.0394,39.0148,38.9982,38.9824,38.9635,38.9416,38.9158,38.8971,38.8743,38.8492,38.8239,38.8032,38.7835,38.7602,38.725,38.7141,38.685,38.6423,38.616,38.5882,38.5576,38.542,38.5128,38.4741,38.4482,38.4146,38.3829,38.356,38.3246,38.2855,38.2512,38.2146,38.1736,38.1459,38.1009,38.0587,38.0277,38.0182,37.9769,37.9329,37.8987,37.8544,37.8153,37.779,37.7193,37.6823,37.638,37.5957,37.56,37.5142,37.4832,37.4359,37.3944,37.3447,37.3116,37.253,37.2121,37.1645,37.1221,37.0727,37.0185,36.9721,36.9158,36.8648,36.8214,36.7575,36.7204,36.6454,36.6003,36.5445,36.4969,36.45,36.3944,36.3391,36.2818,36.2089,36.1477,36.0998,36.0336,35.977,35.9287,35.8662,35.7897,35.7211,35.6861,35.6117,35.5285,35.4889,35.4001,35.3477], 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"GGTGG":35941, "GGCAA":41586, "GGCAT":23009, "GGCAC":12472, "GGCAG":14827, "GGCTA":25456, "GGCTT":24067, "GGCTC":22187, "GGCTG":12192, "GGCCA":18480, "GGCCT":18889, "GGCCC":10158, "GGCCG":7564, "GGCGA":17254, "GGCGT":11852, "GGCGC":8955, "GGCGG":12633, "GGGAA":98869, "GGGAT":20325, "GGGAC":12141, "GGGAG":131740, "GGGTA":30258, "GGGTT":29278, "GGGTC":12248, "GGGTG":33548, "GGGCA":16637, "GGGCT":14352, "GGGCC":7255, "GGGCG":12891, "GGGGA":146962, "GGGGT":35712, "GGGGC":14678, "GGGGG":1880377 }, "overrepresented_sequences": { } }, "command": "/home/shared/fastp-v0.24.0/fastp --in1 POR-262-TP2_R1_001.fastq.gz --in2 POR-262-TP2_R2_001.fastq.gz --detect_adapter_for_pe --trim_poly_g --trim_poly_x --thread 16 --trim_front1 15 --trim_front2 15 --html /home/shared/8TB_HDD_01/sam/gitrepos/urol-e5/timeseries_molecular/E-Peve/output/01.00-E-Peve-WGBS-trimming-fastp-FastQC-MultiQC/POR-262-TP2_R1_001.fastp-trim.report.html --json /home/shared/8TB_HDD_01/sam/gitrepos/urol-e5/timeseries_molecular/E-Peve/output/01.00-E-Peve-WGBS-trimming-fastp-FastQC-MultiQC/POR-262-TP2_R1_001.fastp-trim.report.json --out1 /home/shared/8TB_HDD_01/sam/gitrepos/urol-e5/timeseries_molecular/E-Peve/output/01.00-E-Peve-WGBS-trimming-fastp-FastQC-MultiQC/POR-262-TP2_R1_001.fastp-trim.fq.gz --out2 /home/shared/8TB_HDD_01/sam/gitrepos/urol-e5/timeseries_molecular/E-Peve/output/01.00-E-Peve-WGBS-trimming-fastp-FastQC-MultiQC/POR-262-TP2_R2_001.fastp-trim.fq.gz " }