Index of /gitrepos/urol-e5/timeseries_molecular/E-Peve/output/00.30-E-Peve-transcriptome-assembly-Trinity/PASA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[ ]11.ooc 2026-01-09 15:02 920  
[TXT]Dockerfile.pasaweb 2026-02-17 15:00 149  
[ ]__all_transcripts.fasta2026-01-14 21:48 1.3G 
[ ]__all_transcripts.fa..>2026-01-15 10:42 88M 
[ ]__all_transcripts.fa..>2026-01-14 22:54 69M 
[ ]__all_transcripts.fa..>2026-01-14 23:00 458M 
[ ]__all_transcripts.fa..>2026-01-14 22:54 312M 
[ ]__all_transcripts.fa..>2026-01-14 23:00 4.4M 
[ ]__all_transcripts.fa..>2026-01-14 22:57 194M 
[DIR]__all_transcripts.fa..>2026-01-14 23:00 -  
[DIR]__all_transcripts.fa..>2026-01-14 22:10 -  
[DIR]__all_transcripts.fa..>2026-01-14 22:51 -  
[ ]__pasa_peve_pasa_mys..>2026-02-27 00:01 813  
[DIR]__pasa_peve_pasa_mys..>2026-02-27 00:01 -  
[ ]alignAssembly.config 2026-02-17 08:34 504  
[ ]alignment.validation..>2026-01-15 13:08 816M 
[ ]alt_splicing_analysi..>2026-02-19 00:34 6.9K 
[ ]annotCompare.config 2026-02-21 10:03 504  
[ ]blat.spliced_alignme..>2026-01-10 02:26 392M 
[TXT]cdna_alignment_mysql..>2025-12-31 14:42 16K 
[TXT]conf.txt 2026-02-27 08:37 267  
[TXT]err_seqcl_transcript..>2025-12-31 12:59 1.3K 
[ ]gmap.spliced_alignme..>2026-01-09 15:01 594M 
[TXT]gmap.spliced_alignme..>2026-01-09 15:01 0  
[TXT]minimap2.splice_alig..>2026-01-10 02:47 0  
[ ]minimap2.spliced_ali..>2026-01-10 02:47 502M 
[ ]outparts_cln.sort 2025-12-31 12:58 69K 
[DIR]pasa_run.log.dir/ 2026-02-21 13:44 -  
[ ]pasapipeline.v2.5.3...>2025-12-31 12:56 472M 
[DIR]pblat_outdir/ 2026-01-10 02:26 -  
[ ]peve_pasa.alt_splice..>2026-02-19 02:10 15M 
[TXT]peve_pasa.alt_splici..>2026-02-19 02:22 20M 
[TXT]peve_pasa.alt_splici..>2026-02-19 02:28 200M 
[ ]peve_pasa.assemblies..>2026-01-25 22:25 548M 
[ ]peve_pasa.correlated..>2026-02-19 02:11 9.4M 
[ ]peve_pasa.failed_bla..>2026-01-16 10:34 156M 
[ ]peve_pasa.failed_bla..>2026-01-16 10:41 294M 
[ ]peve_pasa.failed_gma..>2026-01-16 11:14 134M 
[ ]peve_pasa.failed_gma..>2026-01-16 11:20 269M 
[ ]peve_pasa.failed_min..>2026-01-16 21:03 147M 
[ ]peve_pasa.failed_min..>2026-01-16 23:24 278M 
[ ]peve_pasa.gene_struc..>2026-02-14 14:17 9.5M 
[ ]peve_pasa.gene_struc..>2026-02-14 14:16 138M 
[ ]peve_pasa.gene_struc..>2026-02-21 10:04 216M 
[ ]peve_pasa.gene_struc..>2026-02-27 00:01 10M 
[ ]peve_pasa.gene_struc..>2026-02-27 00:01 152M 
[ ]peve_pasa.indiv_spli..>2026-02-19 02:10 388M 
[ ]peve_pasa.pasa_align..>2026-01-24 07:40 1.1G 
[ ]peve_pasa.pasa_assem..>2026-01-27 10:14 48M 
[ ]peve_pasa.pasa_assem..>2026-01-27 09:46 156M 
[ ]peve_pasa.pasa_assem..>2026-01-27 10:58 247M 
[TXT]peve_pasa.pasa_assem..>2026-01-27 16:00 165M 
[ ]peve_pasa.polyAsites..>2026-01-17 00:38 84K 
[ ]peve_pasa.valid_blat..>2026-01-16 10:17 123M 
[ ]peve_pasa.valid_blat..>2026-01-16 10:11 213M 
[ ]peve_pasa.valid_blat..>2026-01-16 10:31 509M 
[ ]peve_pasa.valid_gmap..>2026-01-16 10:54 129M 
[ ]peve_pasa.valid_gmap..>2026-01-16 10:48 228M 
[ ]peve_pasa.valid_gmap..>2026-01-16 11:11 544M 
[ ]peve_pasa.valid_mini..>2026-01-16 13:02 129M 
[ ]peve_pasa.valid_mini..>2026-01-16 11:37 236M 
[ ]peve_pasa.valid_mini..>2026-01-16 18:23 553M 
[ ]peve_pasa_backup.sql 2026-02-27 11:42 8.5G 
[ ]pipeliner.2074037.cmds 2026-01-14 21:48 294  
[ ]pipeliner.2074109.cmds 2026-01-14 22:57 3.0K 
[ ]pipeliner.2074232.cmds 2026-01-14 22:51 2.9K 
[ ]run-pasa-web.sh 2026-02-17 13:58 1.0K 
[TXT]seqcl_transcripts.fa..>2025-12-31 12:59 1.1K 
[ ]tdn.accs 2025-12-31 12:55 26M 
[TXT]tmp-2289453-85464-out 2026-01-09 15:02 0  
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[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[TXT]tmp-2289453-85464-ou..>2026-01-09 15:02 0  
[ ]transcripts.fasta 2025-12-31 12:53 1.2G 
[ ]transcripts.fasta.cidx 2025-12-31 12:57 87M 
[ ]transcripts.fasta.clean2025-12-31 12:59 1.2G 
[ ]transcripts.fasta.cl..>2025-12-31 14:56 70M 
[ ]transcripts.fasta.cl..>2026-01-10 02:45 312M 
[ ]transcripts.fasta.cl..>2026-01-10 02:45 962K 
[TXT]transcripts.fasta.cl..>2026-01-10 02:45 0  
[ ]transcripts.fasta.cln 2025-12-31 12:58 98M