Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content POR-216-TP1_R1_001 POR-216-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19629651.0 2.9 Gbp 0.0 150.0 45.0 23.677600607677345 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP1_R2_001 POR-216-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19629651.0 2.9 Gbp 0.0 150.0 45.0 22.62499213707928 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP2_R1_001 POR-216-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18889247.0 2.8 Gbp 0.0 150.0 47.0 21.416203006657582 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP2_R2_001 POR-216-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18889247.0 2.8 Gbp 0.0 150.0 47.0 20.958120907135218 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP3_R1_001 POR-216-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16130742.0 2.4 Gbp 0.0 150.0 48.0 17.045605499801233 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP3_R2_001 POR-216-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16130742.0 2.4 Gbp 0.0 150.0 47.0 17.215019587893774 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-216-TP4_R1_001 POR-216-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21522395.0 3.2 Gbp 0.0 150.0 48.0 11.986231272835346 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-216-TP4_R2_001 POR-216-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21522395.0 3.2 Gbp 0.0 150.0 48.0 12.017804405071864 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-236-TP1_R1_001 POR-236-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21310837.0 3.1 Gbp 0.0 150.0 47.0 19.136616489108203 150.0 150 pass pass fail pass fail pass pass pass fail warn pass POR-236-TP1_R2_001 POR-236-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21310837.0 3.1 Gbp 0.0 150.0 46.0 19.03662043581006 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-236-TP2_R1_001 POR-236-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19622258.0 2.9 Gbp 0.0 150.0 49.0 12.057115056647536 150.0 150 pass pass fail pass fail warn pass pass fail fail pass POR-236-TP2_R2_001 POR-236-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19622258.0 2.9 Gbp 0.0 150.0 48.0 12.442697213530868 150.0 150 pass pass fail pass fail warn pass pass fail fail pass POR-245-TP1_R1_001 POR-245-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19295128.0 2.8 Gbp 0.0 150.0 46.0 22.273304123698225 150.0 150 pass pass fail pass fail pass pass pass fail warn pass POR-245-TP1_R2_001 POR-245-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19295128.0 2.8 Gbp 0.0 150.0 46.0 21.495421473836867 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-245-TP2_R1_001 POR-245-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16922913.0 2.5 Gbp 0.0 150.0 49.0 11.88626525762432 150.0 150 pass pass fail pass fail warn pass pass fail fail pass POR-245-TP2_R2_001 POR-245-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16922913.0 2.5 Gbp 0.0 150.0 48.0 12.446790333979745 150.0 150 pass pass fail pass fail warn pass pass fail fail pass POR-245-TP3_R1_001 POR-245-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18939312.0 2.8 Gbp 0.0 150.0 49.0 11.54206920546064 150.0 150 pass pass fail pass fail warn pass pass fail fail pass POR-245-TP3_R2_001 POR-245-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18939312.0 2.8 Gbp 0.0 150.0 49.0 11.87596541496243 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-245-TP4_R1_001 POR-245-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17178431.0 2.5 Gbp 0.0 150.0 44.0 29.386258043598552 150.0 150 pass pass fail pass fail fail pass pass fail warn warn POR-245-TP4_R2_001 POR-245-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17178431.0 2.5 Gbp 0.0 150.0 44.0 28.30840357312464 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-260-TP1_R1_001 POR-260-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17358699.0 2.6 Gbp 0.0 150.0 45.0 30.409660079309525 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-260-TP1_R2_001 POR-260-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17358699.0 2.6 Gbp 0.0 150.0 45.0 29.185751274417786 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-260-TP2_R1_001 POR-260-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17539918.0 2.6 Gbp 0.0 150.0 48.0 14.641448943462642 150.0 150 pass pass fail pass fail warn pass pass fail fail warn POR-260-TP2_R2_001 POR-260-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17539918.0 2.6 Gbp 0.0 150.0 48.0 15.17853166009258 150.0 150 pass pass fail pass fail warn pass pass fail fail warn POR-260-TP3_R1_001 POR-260-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17191159.0 2.5 Gbp 0.0 150.0 47.0 18.714680317003836 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-260-TP3_R2_001 POR-260-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17191159.0 2.5 Gbp 0.0 150.0 47.0 18.633107556802944 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-260-TP4_R1_001 POR-260-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19591902.0 2.9 Gbp 0.0 150.0 47.0 18.519368129721467 150.0 150 pass pass fail pass fail pass pass pass fail warn warn POR-260-TP4_R2_001 POR-260-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19591902.0 2.9 Gbp 0.0 150.0 46.0 18.274795688852112 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-262-TP1_R1_001 POR-262-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20379820.0 3 Gbp 0.0 150.0 46.0 19.727720530098978 150.0 150 pass pass fail pass fail pass pass pass fail warn warn POR-262-TP1_R2_001 POR-262-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20379820.0 3 Gbp 0.0 150.0 46.0 19.16237745533729 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-262-TP2_R1_001 POR-262-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20908677.0 3.1 Gbp 0.0 150.0 46.0 23.836184701856027 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-262-TP2_R2_001 POR-262-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20908677.0 3.1 Gbp 0.0 150.0 46.0 23.496575200235046 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-262-TP3_R1_001 POR-262-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21550471.0 3.2 Gbp 0.0 150.0 47.0 18.423169005852515 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-262-TP3_R2_001 POR-262-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21550471.0 3.2 Gbp 0.0 150.0 47.0 18.38170990830131 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-262-TP4_R1_001 POR-262-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17498161.0 2.6 Gbp 0.0 150.0 47.0 18.313172146630986 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-262-TP4_R2_001 POR-262-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17498161.0 2.6 Gbp 0.0 150.0 47.0 18.433115721566978 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-69-TP1_R1_001 POR-69-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22145299.0 3.3 Gbp 0.0 150.0 47.0 15.489992946871176 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-69-TP1_R2_001 POR-69-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22145299.0 3.3 Gbp 0.0 150.0 47.0 15.28313701862528 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-69-TP2_R1_001 POR-69-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20128579.0 3 Gbp 0.0 150.0 48.0 16.2763370073887 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-69-TP2_R2_001 POR-69-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20128579.0 3 Gbp 0.0 150.0 47.0 16.304986129862822 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-69-TP3_R1_001 POR-69-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21158221.0 3.1 Gbp 0.0 150.0 48.0 12.331194440549037 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-69-TP3_R2_001 POR-69-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21158221.0 3.1 Gbp 0.0 150.0 48.0 12.501121632702247 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-69-TP4_R1_001 POR-69-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17398308.0 2.6 Gbp 0.0 150.0 48.0 13.819757335264798 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-69-TP4_R2_001 POR-69-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17398308.0 2.6 Gbp 0.0 150.0 48.0 13.719797620230215 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-72-TP1_R1_001 POR-72-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16412543.0 2.4 Gbp 0.0 150.0 45.0 24.788169698462255 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-72-TP1_R2_001 POR-72-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16412543.0 2.4 Gbp 0.0 150.0 45.0 23.929235420928208 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-72-TP2_R1_001 POR-72-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17440374.0 2.6 Gbp 0.0 150.0 46.0 26.319675708890532 150.0 150 pass pass fail pass fail pass pass pass fail warn warn POR-72-TP2_R2_001 POR-72-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17440374.0 2.6 Gbp 0.0 150.0 47.0 25.675057533889383 150.0 150 pass pass fail pass warn warn pass pass fail warn warn POR-72-TP3_R1_001 POR-72-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20740212.0 3.1 Gbp 0.0 150.0 46.0 18.481910888052653 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-72-TP3_R2_001 POR-72-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20740212.0 3.1 Gbp 0.0 150.0 46.0 18.065674619000983 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-72-TP4_R1_001 POR-72-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22741315.0 3.4 Gbp 0.0 150.0 46.0 21.532795584816412 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-72-TP4_R2_001 POR-72-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22741315.0 3.4 Gbp 0.0 150.0 46.0 21.1860132307456 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-73-TP1_R1_001 POR-73-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20369326.0 3 Gbp 0.0 150.0 48.0 13.501759200138663 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-73-TP1_R2_001 POR-73-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20369326.0 3 Gbp 0.0 150.0 47.0 13.565434466943346 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-73-TP2_R1_001 POR-73-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21791714.0 3.2 Gbp 0.0 150.0 48.0 11.203337230145719 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-73-TP2_R2_001 POR-73-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21791714.0 3.2 Gbp 0.0 150.0 48.0 11.492438351573368 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-73-TP3_R1_001 POR-73-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19415470.0 2.9 Gbp 0.0 150.0 49.0 8.962906273314543 150.0 150 pass pass fail pass fail fail pass pass fail warn warn POR-73-TP3_R2_001 POR-73-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19415470.0 2.9 Gbp 0.0 150.0 49.0 9.314933346032612 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-73-TP4_R1_001 POR-73-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18797406.0 2.8 Gbp 0.0 150.0 48.0 13.779171060536324 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-73-TP4_R2_001 POR-73-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18797406.0 2.8 Gbp 0.0 150.0 47.0 14.127353604337348 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-74-TP1_R1_001 POR-74-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18332488.0 2.7 Gbp 0.0 150.0 46.0 21.687872224457827 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-74-TP1_R2_001 POR-74-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18332488.0 2.7 Gbp 0.0 150.0 46.0 20.96538651249708 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-74-TP2_R1_001 POR-74-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18048084.0 2.7 Gbp 0.0 150.0 48.0 13.325293975998278 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-74-TP2_R2_001 POR-74-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18048084.0 2.7 Gbp 0.0 150.0 48.0 13.76339776917111 150.0 150 pass pass fail pass fail warn pass pass fail fail warn POR-74-TP3_R1_001 POR-74-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22139966.0 3.3 Gbp 0.0 150.0 48.0 15.729478696862692 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-74-TP3_R2_001 POR-74-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22139966.0 3.3 Gbp 0.0 150.0 47.0 16.93566871040374 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-74-TP4_R1_001 POR-74-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19686031.0 2.9 Gbp 0.0 150.0 49.0 11.240083313222302 150.0 150 pass pass fail pass fail warn pass pass fail fail warn POR-74-TP4_R2_001 POR-74-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19686031.0 2.9 Gbp 0.0 150.0 48.0 11.664502015183428 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-83-TP1_R1_001 POR-83-TP1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18220049.0 2.7 Gbp 0.0 150.0 47.0 21.446116495619304 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-83-TP1_R2_001 POR-83-TP1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18220049.0 2.7 Gbp 0.0 150.0 47.0 21.669418605132474 150.0 150 pass pass fail pass fail warn pass pass fail fail warn POR-83-TP2_R1_001 POR-83-TP2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19283722.0 2.8 Gbp 0.0 150.0 47.0 17.434713097497813 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-83-TP2_R2_001 POR-83-TP2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19283722.0 2.8 Gbp 0.0 150.0 47.0 17.204777100204645 150.0 150 pass pass fail pass fail warn pass pass fail warn pass POR-83-TP3_R1_001 POR-83-TP3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18981608.0 2.8 Gbp 0.0 150.0 49.0 11.70902768515574 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-83-TP3_R2_001 POR-83-TP3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18981608.0 2.8 Gbp 0.0 150.0 48.0 12.16395006359864 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-83-TP4_R1_001 POR-83-TP4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23548689.0 3.5 Gbp 0.0 150.0 48.0 12.043781654477659 150.0 150 pass pass fail pass fail warn pass pass fail warn warn POR-83-TP4_R2_001 POR-83-TP4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 23548689.0 3.5 Gbp 0.0 150.0 47.0 12.063741223623815 150.0 150 pass pass fail pass fail warn pass pass fail warn warn