CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 311089 1669048 15.71 1980137 2 296925 2707270 9.88 3004195 3 226114 3228193 6.55 3454307 4 182774 2527619 6.74 2710393 5 94946 3186295 2.89 3281241 6 77887 2161664 3.48 2239551 7 73153 2050079 3.45 2123232 8 80874 2135369 3.65 2216243 9 76292 2103935 3.50 2180227 10 75597 2086835 3.50 2162432 11 92731 2116247 4.20 2208978 12 106377 2161196 4.69 2267573 13 83845 2170158 3.72 2254003 14 74003 2207213 3.24 2281216 15 73286 2250138 3.15 2323424 16 74762 2199900 3.29 2274662 17 71276 2192960 3.15 2264236 18 69469 2295103 2.94 2364572 19 69582 2216507 3.04 2286089 20 71465 2241910 3.09 2313375 21 70012 2267719 2.99 2337731 22 70419 2260316 3.02 2330735 23 69811 2280310 2.97 2350121 24 67977 2305195 2.86 2373172 25 69383 2284664 2.95 2354047 26 69551 2289210 2.95 2358761 27 68082 2307141 2.87 2375223 28 68358 2287004 2.90 2355362 29 68854 2290062 2.92 2358916 30 66915 2300930 2.83 2367845 31 67746 2286078 2.88 2353824 32 69317 2290591 2.94 2359908 33 67453 2306706 2.84 2374159 34 67564 2289243 2.87 2356807 35 68209 2307252 2.87 2375461 36 67221 2323031 2.81 2390252 37 67381 2311905 2.83 2379286 38 68019 2305479 2.87 2373498 39 66633 2314739 2.80 2381372 40 66005 2287317 2.80 2353322 41 67300 2282842 2.86 2350142 42 65880 2291643 2.79 2357523 43 65957 2265716 2.83 2331673 44 66461 2274991 2.84 2341452 45 65673 2286174 2.79 2351847 46 65978 2261388 2.83 2327366 47 66351 2259857 2.85 2326208 48 65348 2263720 2.81 2329068 49 65934 2236016 2.86 2301950 50 65248 2223438 2.85 2288686 51 64179 2219882 2.81 2284061 52 64988 2192703 2.88 2257691 53 64603 2176469 2.88 2241072 54 63595 2167420 2.85 2231015 55 63959 2141537 2.90 2205496 56 63273 2134091 2.88 2197364 57 62757 2129800 2.86 2192557 58 62452 2090884 2.90 2153336 59 62646 2081759 2.92 2144405 60 61404 2072856 2.88 2134260 61 61861 2032685 2.95 2094546 62 61548 2011807 2.97 2073355 63 61088 1993145 2.97 2054233 64 60526 1955106 3.00 2015632 65 59818 1930068 3.01 1989886 66 59149 1918676 2.99 1977825 67 58773 1887504 3.02 1946277 68 58869 1864719 3.06 1923588 69 57698 1842427 3.04 1900125 70 57868 1807063 3.10 1864931 71 56508 1785431 3.07 1841939 72 55833 1757937 3.08 1813770 73 56340 1716488 3.18 1772828 74 54827 1692844 3.14 1747671 75 54028 1669326 3.14 1723354 76 53217 1631589 3.16 1684806 77 52455 1602128 3.17 1654583 78 52191 1581831 3.19 1634022 79 51272 1546069 3.21 1597341 80 51104 1518597 3.26 1569701 81 49836 1494152 3.23 1543988 82 49403 1455365 3.28 1504768 83 48949 1430456 3.31 1479405 84 47881 1409253 3.29 1457134 85 47622 1371334 3.36 1418956 86 46420 1341991 3.34 1388411 87 45635 1321643 3.34 1367278 88 44996 1291138 3.37 1336134 89 44515 1260062 3.41 1304577 90 43215 1234891 3.38 1278106 91 43003 1198898 3.46 1241901 92 42576 1173585 3.50 1216161 93 40970 1148000 3.45 1188970 94 40247 1119629 3.47 1159876 95 39717 1092828 3.51 1132545 96 38819 1072798 3.49 1111617 97 38318 1038583 3.56 1076901 98 37084 1014995 3.52 1052079 99 36984 993277 3.59 1030261 100 35863 959540 3.60 995403 101 35257 938537 3.62 973794 102 34372 916272 3.62 950644 103 33866 887736 3.67 921602 104 32901 865496 3.66 898397 105 31907 847050 3.63 878957 106 31473 820406 3.69 851879 107 31071 800542 3.74 831613 108 30160 779091 3.73 809251 109 29623 758006 3.76 787629 110 29090 737622 3.79 766712 111 28404 719777 3.80 748181 112 27606 694708 3.82 722314 113 27238 678881 3.86 706119 114 26440 656993 3.87 683433 115 25825 636925 3.90 662750 116 25763 622269 3.98 648032 117 24786 604196 3.94 628982 118 24091 586866 3.94 610957 119 23738 568840 4.01 592578 120 23139 556454 3.99 579593 121 22496 537132 4.02 559628 122 21916 520966 4.04 542882 123 21151 505055 4.02 526206 124 20815 488125 4.09 508940 125 20381 473465 4.13 493846 126 20015 458377 4.18 478392 127 19442 445841 4.18 465283 128 18933 431575 4.20 450508 129 18595 420316 4.24 438911 130 17903 405345 4.23 423248 131 17633 392471 4.30 410104 132 17069 382443 4.27 399512 133 16713 367376 4.35 384089 134 16345 356669 4.38 373014 135 15635 346088 4.32 361723 136 15443 334226 4.42 349669 137 14934 323383 4.41 338317 138 14792 314928 4.49 329720 139 14507 302205 4.58 316712 140 13860 293975 4.50 307835 141 13246 282940 4.47 296186 142 12825 273344 4.48 286169 143 12254 264602 4.43 276856 144 11879 256888 4.42 268767 145 11767 246937 4.55 258704 146 11401 239546 4.54 250947 147 11525 234546 4.68 246071 148 11844 228060 4.94 239904 149 12630 222315 5.38 234945 150 10948 217115 4.80 228063 151 10870 200445 5.14 211315 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 513024 4980576 9.34 5493600 2 281048 1869613 13.07 2150661 3 202787 2743811 6.88 2946598 4 170470 2311854 6.87 2482324 5 64001 3115979 2.01 3179980 6 53053 3845135 1.36 3898188 7 48410 2497659 1.90 2546069 8 49049 2484558 1.94 2533607 9 42301 2476745 1.68 2519046 10 60742 2424546 2.44 2485288 11 64421 2474513 2.54 2538934 12 39499 2558661 1.52 2598160 13 34921 2616146 1.32 2651067 14 40959 2585703 1.56 2626662 15 33977 2576159 1.30 2610136 16 41881 2562298 1.61 2604179 17 30941 2625328 1.16 2656269 18 28206 2609169 1.07 2637375 19 28092 2621130 1.06 2649222 20 29047 2591718 1.11 2620765 21 27890 2629240 1.05 2657130 22 26583 2661386 0.99 2687969 23 25558 2657165 0.95 2682723 24 25029 2659012 0.93 2684041 25 24781 2671387 0.92 2696168 26 24415 2630530 0.92 2654945 27 23997 2654169 0.90 2678166 28 23767 2667561 0.88 2691328 29 23608 2655293 0.88 2678901 30 23279 2654460 0.87 2677739 31 23907 2668771 0.89 2692678 32 23355 2667562 0.87 2690917 33 23463 2689660 0.86 2713123 34 23346 2670999 0.87 2694345 35 23612 2679401 0.87 2703013 36 23352 2686535 0.86 2709887 37 23439 2701767 0.86 2725206 38 23027 2664987 0.86 2688014 39 22816 2674930 0.85 2697746 40 23048 2673258 0.85 2696306 41 22863 2671132 0.85 2693995 42 22935 2661057 0.85 2683992 43 23321 2666989 0.87 2690310 44 22882 2649078 0.86 2671960 45 22959 2669380 0.85 2692339 46 23257 2650919 0.87 2674176 47 23219 2623260 0.88 2646479 48 23437 2627007 0.88 2650444 49 23544 2622457 0.89 2646001 50 23632 2585858 0.91 2609490 51 23409 2582429 0.90 2605838 52 23556 2577735 0.91 2601291 53 23627 2554468 0.92 2578095 54 23658 2535441 0.92 2559099 55 24134 2516668 0.95 2540802 56 24079 2492730 0.96 2516809 57 24880 2486076 0.99 2510956 58 24932 2458517 1.00 2483449 59 25084 2422718 1.02 2447802 60 25126 2411747 1.03 2436873 61 25636 2382736 1.06 2408372 62 25262 2339232 1.07 2364494 63 26212 2330401 1.11 2356613 64 26091 2299675 1.12 2325766 65 26323 2260542 1.15 2286865 66 26015 2238929 1.15 2264944 67 26302 2213406 1.17 2239708 68 26618 2175021 1.21 2201639 69 26690 2150250 1.23 2176940 70 26668 2111107 1.25 2137775 71 26425 2076940 1.26 2103365 72 26831 2051360 1.29 2078191 73 27342 2015102 1.34 2042444 74 26653 1969970 1.33 1996623 75 26960 1949452 1.36 1976412 76 26433 1910914 1.36 1937347 77 26987 1875798 1.42 1902785 78 26751 1844374 1.43 1871125 79 26457 1814172 1.44 1840629 80 26667 1764813 1.49 1791480 81 26747 1747987 1.51 1774734 82 26528 1702939 1.53 1729467 83 26296 1665085 1.55 1691381 84 25977 1640236 1.56 1666213 85 26492 1609970 1.62 1636462 86 26026 1567900 1.63 1593926 87 25676 1540397 1.64 1566073 88 25523 1506430 1.67 1531953 89 25138 1468835 1.68 1493973 90 25117 1440494 1.71 1465611 91 24561 1401145 1.72 1425706 92 24637 1368180 1.77 1392817 93 24513 1341145 1.79 1365658 94 24436 1306312 1.84 1330748 95 23918 1272996 1.84 1296914 96 23533 1247284 1.85 1270817 97 23369 1217841 1.88 1241210 98 23064 1179908 1.92 1202972 99 22714 1153856 1.93 1176570 100 22451 1122828 1.96 1145279 101 22385 1093307 2.01 1115692 102 22028 1063009 2.03 1085037 103 21732 1038698 2.05 1060430 104 21508 1006445 2.09 1027953 105 20822 985134 2.07 1005956 106 20643 957276 2.11 977919 107 20320 929653 2.14 949973 108 20063 910342 2.16 930405 109 19595 883104 2.17 902699 110 19748 853643 2.26 873391 111 19155 831090 2.25 850245 112 18876 808971 2.28 827847 113 18442 784152 2.30 802594 114 18035 763836 2.31 781871 115 18049 739296 2.38 757345 116 17570 719847 2.38 737417 117 17161 704881 2.38 722042 118 16538 677169 2.38 693707 119 16719 657535 2.48 674254 120 16141 641065 2.46 657206 121 15847 623690 2.48 639537 122 15654 599667 2.54 615321 123 15593 585613 2.59 601206 124 15098 564625 2.60 579723 125 14744 549860 2.61 564604 126 14417 533304 2.63 547721 127 14178 517289 2.67 531467 128 13978 500125 2.72 514103 129 13469 485507 2.70 498976 130 13244 468810 2.75 482054 131 13183 452482 2.83 465665 132 12924 440795 2.85 453719 133 12572 427685 2.86 440257 134 12309 410569 2.91 422878 135 11902 398803 2.90 410705 136 11649 385617 2.93 397266 137 11488 372213 2.99 383701 138 11176 360847 3.00 372023 139 11136 349968 3.08 361104 140 10781 336532 3.10 347313 141 10283 326589 3.05 336872 142 10037 315755 3.08 325792 143 9621 303832 3.07 313453 144 9394 294718 3.09 304112 145 9495 285047 3.22 294542 146 9167 277428 3.20 286595 147 9185 270737 3.28 279922 148 9291 262543 3.42 271834 149 9475 255047 3.58 264522 150 10238 256342 3.84 266580 151 14134 231227 5.76 245361 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1459008 5274076 21.67 6733084 2 1316752 6598345 16.64 7915097 3 990836 6289120 13.61 7279956 4 936317 5843680 13.81 6779997 5 453308 7048165 6.04 7501473 6 403188 7852310 4.88 8255498 7 367791 8949215 3.95 9317006 8 351202 8711417 3.88 9062619 9 315199 8413462 3.61 8728661 10 298849 8233247 3.50 8532096 11 311616 8110671 3.70 8422287 12 281704 8043014 3.38 8324718 13 272183 8065781 3.26 8337964 14 271043 8014890 3.27 8285933 15 278911 8000046 3.37 8278957 16 290666 7972864 3.52 8263530 17 261353 7923038 3.19 8184391 18 246950 7921093 3.02 8168043 19 251220 7914584 3.08 8165804 20 258571 7952745 3.15 8211316 21 244713 8002653 2.97 8247366 22 237142 7998860 2.88 8236002 23 234029 8052252 2.82 8286281 24 219673 8063020 2.65 8282693 25 220888 8094015 2.66 8314903 26 220425 8107195 2.65 8327620 27 218429 8154945 2.61 8373374 28 214009 8209073 2.54 8423082 29 215083 8240503 2.54 8455586 30 207232 8259000 2.45 8466232 31 208184 8270244 2.46 8478428 32 203672 8307834 2.39 8511506 33 198921 8312811 2.34 8511732 34 194670 8325101 2.28 8519771 35 194675 8336691 2.28 8531366 36 187105 8331549 2.20 8518654 37 187861 8353548 2.20 8541409 38 183086 8345022 2.15 8528108 39 183577 8336759 2.15 8520336 40 177978 8351779 2.09 8529757 41 176890 8360666 2.07 8537556 42 167970 8345250 1.97 8513220 43 168654 8315344 1.99 8483998 44 164522 8309254 1.94 8473776 45 158671 8263758 1.88 8422429 46 156016 8238048 1.86 8394064 47 155718 8199078 1.86 8354796 48 148752 8185750 1.78 8334502 49 148049 8143547 1.79 8291596 50 145039 8087570 1.76 8232609 51 144837 8055923 1.77 8200760 52 141511 8021837 1.73 8163348 53 139479 7971371 1.72 8110850 54 134469 7899327 1.67 8033796 55 138368 7848402 1.73 7986770 56 133578 7753142 1.69 7886720 57 133804 7697859 1.71 7831663 58 134716 7608685 1.74 7743401 59 135294 7530756 1.76 7666050 60 129985 7453861 1.71 7583846 61 131711 7375098 1.75 7506809 62 129703 7294957 1.75 7424660 63 130647 7211736 1.78 7342383 64 129416 7123560 1.78 7252976 65 131148 7029288 1.83 7160436 66 126672 6924267 1.80 7050939 67 127994 6822235 1.84 6950229 68 127648 6717553 1.86 6845201 69 126705 6608633 1.88 6735338 70 125432 6510028 1.89 6635460 71 127774 6423182 1.95 6550956 72 123488 6319337 1.92 6442825 73 125933 6204697 1.99 6330630 74 125636 6091186 2.02 6216822 75 122471 5997451 2.00 6119922 76 122898 5887742 2.04 6010640 77 123254 5780689 2.09 5903943 78 119789 5667419 2.07 5787208 79 121787 5550474 2.15 5672261 80 119184 5441285 2.14 5560469 81 118175 5344384 2.16 5462559 82 117335 5236226 2.19 5353561 83 118689 5127378 2.26 5246067 84 114079 5017248 2.22 5131327 85 115896 4915975 2.30 5031871 86 114919 4807680 2.33 4922599 87 113416 4703885 2.35 4817301 88 112691 4597471 2.39 4710162 89 112071 4494077 2.43 4606148 90 110238 4397634 2.45 4507872 91 109839 4293190 2.49 4403029 92 109325 4193255 2.54 4302580 93 107362 4087961 2.56 4195323 94 105322 3987187 2.57 4092509 95 105358 3887556 2.64 3992914 96 101574 3795610 2.61 3897184 97 101209 3703408 2.66 3804617 98 99950 3615472 2.69 3715422 99 99035 3518310 2.74 3617345 100 97540 3427633 2.77 3525173 101 96337 3336470 2.81 3432807 102 93287 3243609 2.80 3336896 103 92537 3162248 2.84 3254785 104 91545 3079738 2.89 3171283 105 89623 2994986 2.91 3084609 106 88673 2915596 2.95 3004269 107 88785 2837820 3.03 2926605 108 85331 2756293 3.00 2841624 109 83625 2678405 3.03 2762030 110 82225 2601540 3.06 2683765 111 82200 2530388 3.15 2612588 112 80046 2463032 3.15 2543078 113 79071 2388193 3.20 2467264 114 77000 2313039 3.22 2390039 115 75101 2246367 3.24 2321468 116 74423 2186010 3.29 2260433 117 72112 2123319 3.28 2195431 118 71018 2063377 3.33 2134395 119 70230 1998742 3.39 2068972 120 68444 1939721 3.41 2008165 121 67855 1882004 3.48 1949859 122 66241 1829106 3.49 1895347 123 65063 1773828 3.54 1838891 124 63683 1715891 3.58 1779574 125 62279 1667232 3.60 1729511 126 60658 1614356 3.62 1675014 127 59351 1567753 3.65 1627104 128 58604 1516831 3.72 1575435 129 56573 1469511 3.71 1526084 130 55937 1422719 3.78 1478656 131 54990 1380571 3.83 1435561 132 53500 1336126 3.85 1389626 133 52244 1292295 3.89 1344539 134 51794 1252179 3.97 1303973 135 50521 1211970 4.00 1262491 136 49556 1173001 4.05 1222557 137 48804 1135487 4.12 1184291 138 46858 1097247 4.10 1144105 139 45973 1060945 4.15 1106918 140 44902 1026817 4.19 1071719 141 43506 992605 4.20 1036111 142 42975 961883 4.28 1004858 143 42037 930753 4.32 972790 144 41391 901206 4.39 942597 145 41216 872114 4.51 913330 146 40020 848955 4.50 888975 147 39451 828626 4.54 868077 148 38878 805170 4.61 844048 149 38879 780178 4.75 819057 150 38295 780639 4.68 818934 151 49902 710760 6.56 760662 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29115 148135 16.43 177250 2 25987 241437 9.72 267424 3 20178 267242 7.02 287420 4 16416 202704 7.49 219120 5 8459 257075 3.19 265534 6 6787 155736 4.18 162523 7 6322 146613 4.13 152935 8 7471 142865 4.97 150336 9 6081 136611 4.26 142692 10 6643 130335 4.85 136978 11 8789 127597 6.44 136386 12 11700 124941 8.56 136641 13 7487 120872 5.83 128359 14 5253 118355 4.25 123608 15 5231 117878 4.25 123109 16 5195 110845 4.48 116040 17 4501 107979 4.00 112480 18 4487 107823 4.00 112310 19 4440 100203 4.24 104643 20 4226 97831 4.14 102057 21 4180 95528 4.19 99708 22 3832 92660 3.97 96492 23 3819 89406 4.10 93225 24 3421 87322 3.77 90743 25 3356 84178 3.83 87534 26 3209 81816 3.77 85025 27 3130 79945 3.77 83075 28 2960 75862 3.76 78822 29 2821 74223 3.66 77044 30 2584 71381 3.49 73965 31 2583 68690 3.62 71273 32 2469 67281 3.54 69750 33 2330 64905 3.47 67235 34 2191 61688 3.43 63879 35 2159 60741 3.43 62900 36 2012 59114 3.29 61126 37 2015 57308 3.40 59323 38 1929 55300 3.37 57229 39 1772 53479 3.21 55251 40 1696 51382 3.20 53078 41 1647 49359 3.23 51006 42 1562 48703 3.11 50265 43 1499 46244 3.14 47743 44 1462 45470 3.12 46932 45 1336 43945 2.95 45281 46 1312 42286 3.01 43598 47 1227 41339 2.88 42566 48 1249 40396 3.00 41645 49 1133 38366 2.87 39499 50 1086 37849 2.79 38935 51 1039 36765 2.75 37804 52 1007 35327 2.77 36334 53 1006 34012 2.87 35018 54 890 33365 2.60 34255 55 938 31755 2.87 32693 56 882 31325 2.74 32207 57 816 30434 2.61 31250 58 820 29054 2.74 29874 59 818 28118 2.83 28936 60 756 27701 2.66 28457 61 737 26587 2.70 27324 62 700 25633 2.66 26333 63 653 24920 2.55 25573 64 626 23936 2.55 24562 65 666 23341 2.77 24007 66 629 22604 2.71 23233 67 596 22237 2.61 22833 68 572 21266 2.62 21838 69 569 20359 2.72 20928 70 553 19620 2.74 20173 71 561 19488 2.80 20049 72 559 18828 2.88 19387 73 538 17525 2.98 18063 74 538 17417 3.00 17955 75 473 17175 2.68 17648 76 464 15968 2.82 16432 77 405 15336 2.57 15741 78 420 15458 2.65 15878 79 404 14621 2.69 15025 80 430 14328 2.91 14758 81 378 13864 2.65 14242 82 382 13229 2.81 13611 83 353 12873 2.67 13226 84 382 12700 2.92 13082 85 327 11938 2.67 12265 86 357 11726 2.95 12083 87 378 11360 3.22 11738 88 312 11059 2.74 11371 89 305 10493 2.82 10798 90 268 10211 2.56 10479 91 301 10081 2.90 10382 92 285 9560 2.89 9845 93 243 9297 2.55 9540 94 289 9155 3.06 9444 95 295 8842 3.23 9137 96 246 8977 2.67 9223 97 259 8207 3.06 8466 98 242 7805 3.01 8047 99 226 7703 2.85 7929 100 212 7223 2.85 7435 101 233 7210 3.13 7443 102 209 6766 3.00 6975 103 219 6690 3.17 6909 104 206 6385 3.13 6591 105 187 6378 2.85 6565 106 177 6193 2.78 6370 107 197 6155 3.10 6352 108 161 5814 2.69 5975 109 158 5514 2.79 5672 110 200 5380 3.58 5580 111 173 5509 3.04 5682 112 149 5059 2.86 5208 113 175 4954 3.41 5129 114 161 4963 3.14 5124 115 167 4578 3.52 4745 116 130 4579 2.76 4709 117 156 4425 3.41 4581 118 129 4403 2.85 4532 119 146 4216 3.35 4362 120 117 4407 2.59 4524 121 133 3985 3.23 4118 122 125 3873 3.13 3998 123 110 3839 2.79 3949 124 123 3682 3.23 3805 125 110 3571 2.99 3681 126 110 3415 3.12 3525 127 106 3348 3.07 3454 128 115 3150 3.52 3265 129 103 3133 3.18 3236 130 104 3094 3.25 3198 131 91 2979 2.96 3070 132 89 2850 3.03 2939 133 95 2682 3.42 2777 134 85 2685 3.07 2770 135 106 2627 3.88 2733 136 80 2533 3.06 2613 137 91 2386 3.67 2477 138 80 2491 3.11 2571 139 77 2226 3.34 2303 140 82 2227 3.55 2309 141 75 2171 3.34 2246 142 81 2045 3.81 2126 143 68 2061 3.19 2129 144 70 2009 3.37 2079 145 68 1980 3.32 2048 146 69 1935 3.44 2004 147 73 1965 3.58 2038 148 71 1876 3.65 1947 149 69 1847 3.60 1916 150 59 1727 3.30 1786 151 37 1499 2.41 1536 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 51082 448558 10.22 499640 2 25342 156943 13.90 182285 3 20726 205627 9.16 226353 4 15677 175701 8.19 191378 5 7142 237509 2.92 244651 6 5748 295638 1.91 301386 7 5108 172502 2.88 177610 8 5129 163764 3.04 168893 9 4710 157230 2.91 161940 10 6759 147580 4.38 154339 11 9902 144554 6.41 154456 12 4201 143736 2.84 147937 13 3692 142927 2.52 146619 14 3318 135865 2.38 139183 15 3389 130525 2.53 133914 16 3923 126476 3.01 130399 17 2805 124373 2.21 127178 18 2767 119655 2.26 122422 19 2682 115678 2.27 118360 20 2629 109572 2.34 112201 21 2506 108181 2.26 110687 22 2255 104793 2.11 107048 23 2138 101245 2.07 103383 24 2004 98139 2.00 100143 25 1813 96193 1.85 98006 26 1730 91605 1.85 93335 27 1619 88683 1.79 90302 28 1637 87041 1.85 88678 29 1438 82826 1.71 84264 30 1358 79692 1.68 81050 31 1314 78448 1.65 79762 32 1245 75800 1.62 77045 33 1214 73737 1.62 74951 34 1088 70818 1.51 71906 35 983 68408 1.42 69391 36 1015 66752 1.50 67767 37 909 65106 1.38 66015 38 835 62571 1.32 63406 39 859 61126 1.39 61985 40 797 58412 1.35 59209 41 710 57774 1.21 58484 42 667 55120 1.20 55787 43 660 53739 1.21 54399 44 652 51842 1.24 52494 45 512 50679 1.00 51191 46 544 49598 1.08 50142 47 507 46656 1.07 47163 48 490 45777 1.06 46267 49 453 45153 0.99 45606 50 466 42699 1.08 43165 51 402 42268 0.94 42670 52 399 40539 0.97 40938 53 403 39545 1.01 39948 54 349 37885 0.91 38234 55 327 36658 0.88 36985 56 303 35633 0.84 35936 57 297 34603 0.85 34900 58 290 33146 0.87 33436 59 272 32887 0.82 33159 60 283 31428 0.89 31711 61 251 30439 0.82 30690 62 253 28774 0.87 29027 63 265 28870 0.91 29135 64 246 27435 0.89 27681 65 217 26838 0.80 27055 66 258 25923 0.99 26181 67 243 25387 0.95 25630 68 205 24684 0.82 24889 69 179 23508 0.76 23687 70 205 22414 0.91 22619 71 215 21900 0.97 22115 72 202 21601 0.93 21803 73 189 20886 0.90 21075 74 192 19772 0.96 19964 75 193 19513 0.98 19706 76 172 18973 0.90 19145 77 169 17983 0.93 18152 78 174 17303 1.00 17477 79 178 17015 1.04 17193 80 150 16422 0.91 16572 81 165 16680 0.98 16845 82 142 15422 0.91 15564 83 145 14911 0.96 15056 84 156 14273 1.08 14429 85 158 14198 1.10 14356 86 146 13479 1.07 13625 87 152 13165 1.14 13317 88 140 12663 1.09 12803 89 125 12324 1.00 12449 90 117 11795 0.98 11912 91 133 11558 1.14 11691 92 123 10993 1.11 11116 93 126 10986 1.13 11112 94 92 10288 0.89 10380 95 125 10235 1.21 10360 96 102 10065 1.00 10167 97 103 9526 1.07 9629 98 104 9102 1.13 9206 99 108 8743 1.22 8851 100 112 8631 1.28 8743 101 98 8510 1.14 8608 102 92 8058 1.13 8150 103 98 7941 1.22 8039 104 93 7345 1.25 7438 105 80 7341 1.08 7421 106 76 7089 1.06 7165 107 104 6854 1.49 6958 108 99 6689 1.46 6788 109 71 6422 1.09 6493 110 72 6270 1.14 6342 111 75 6123 1.21 6198 112 72 5970 1.19 6042 113 81 5670 1.41 5751 114 84 5464 1.51 5548 115 73 5370 1.34 5443 116 62 5412 1.13 5474 117 75 5303 1.39 5378 118 73 5015 1.43 5088 119 75 4733 1.56 4808 120 80 4454 1.76 4534 121 69 4610 1.47 4679 122 74 4508 1.62 4582 123 58 4368 1.31 4426 124 61 4118 1.46 4179 125 77 4051 1.87 4128 126 47 4055 1.15 4102 127 57 3822 1.47 3879 128 56 3577 1.54 3633 129 48 3612 1.31 3660 130 59 3349 1.73 3408 131 57 3389 1.65 3446 132 53 3269 1.60 3322 133 54 3072 1.73 3126 134 36 3037 1.17 3073 135 45 2957 1.50 3002 136 59 2887 2.00 2946 137 59 2801 2.06 2860 138 54 2709 1.95 2763 139 55 2809 1.92 2864 140 40 2566 1.53 2606 141 39 2497 1.54 2536 142 38 2511 1.49 2549 143 46 2329 1.94 2375 144 31 2311 1.32 2342 145 47 2330 1.98 2377 146 38 2184 1.71 2222 147 36 2218 1.60 2254 148 30 2194 1.35 2224 149 31 2061 1.48 2092 150 30 1974 1.50 2004 151 26 1680 1.52 1706 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 128346 437213 22.69 565559 2 117811 558771 17.41 676582 3 90261 481041 15.80 571302 4 83302 428217 16.29 511519 5 45343 520085 8.02 565428 6 40535 566198 6.68 606733 7 34527 639014 5.13 673541 8 38579 597133 6.07 635712 9 29514 562111 4.99 591625 10 28688 525568 5.18 554256 11 30880 494328 5.88 525208 12 26597 473583 5.32 500180 13 23902 462201 4.92 486103 14 23462 446121 5.00 469583 15 26355 434036 5.72 460391 16 27687 417835 6.21 445522 17 22110 405463 5.17 427573 18 20420 387129 5.01 407549 19 20992 374570 5.31 395562 20 20631 363799 5.37 384430 21 19676 352623 5.28 372299 22 18677 341758 5.18 360435 23 19713 334032 5.57 353745 24 16354 324249 4.80 340603 25 16203 313653 4.91 329856 26 15517 304194 4.85 319711 27 16184 296309 5.18 312493 28 14942 287941 4.93 302883 29 15643 279171 5.31 294814 30 13473 270797 4.74 284270 31 13895 262703 5.02 276598 32 13614 256009 5.05 269623 33 12978 248413 4.96 261391 34 12706 239574 5.04 252280 35 13219 234523 5.34 247742 36 11647 226724 4.89 238371 37 11683 220531 5.03 232214 38 11140 213102 4.97 224242 39 11789 205332 5.43 217121 40 11133 200811 5.25 211944 41 11407 193945 5.55 205352 42 9537 190039 4.78 199576 43 10666 183123 5.50 193789 44 10426 177888 5.54 188314 45 9767 172514 5.36 182281 46 9901 168130 5.56 178031 47 10090 162456 5.85 172546 48 8710 159199 5.19 167909 49 8568 153676 5.28 162244 50 8782 149260 5.56 158042 51 9041 144355 5.89 153396 52 8682 140853 5.81 149535 53 8825 136046 6.09 144871 54 7520 132707 5.36 140227 55 8173 128735 5.97 136908 56 7606 123934 5.78 131540 57 7722 121263 5.99 128985 58 7848 116522 6.31 124370 59 7986 112413 6.63 120399 60 6996 109369 6.01 116365 61 7095 106438 6.25 113533 62 6975 102750 6.36 109725 63 6699 99958 6.28 106657 64 6881 96873 6.63 103754 65 7094 94802 6.96 101896 66 6019 90358 6.25 96377 67 6296 87800 6.69 94096 68 6119 84577 6.75 90696 69 6007 81437 6.87 87444 70 5999 79621 7.01 85620 71 6559 77151 7.84 83710 72 5429 74899 6.76 80328 73 5507 72039 7.10 77546 74 5793 69587 7.69 75380 75 5323 67495 7.31 72818 76 5452 65778 7.65 71230 77 5683 64546 8.09 70229 78 4975 61514 7.48 66489 79 5337 59203 8.27 64540 80 4933 57769 7.87 62702 81 4744 56406 7.76 61150 82 4702 54176 7.99 58878 83 5156 52381 8.96 57537 84 4296 51126 7.75 55422 85 4559 49466 8.44 54025 86 4553 48694 8.55 53247 87 4345 46641 8.52 50986 88 4348 45369 8.75 49717 89 4374 44073 9.03 48447 90 3888 43042 8.28 46930 91 3940 41351 8.70 45291 92 3999 40152 9.06 44151 93 3811 38624 8.98 42435 94 3773 37267 9.19 41040 95 3906 36226 9.73 40132 96 3349 35410 8.64 38759 97 3459 34847 9.03 38306 98 3460 33643 9.33 37103 99 3476 31784 9.86 35260 100 3375 31472 9.69 34847 101 3316 30574 9.78 33890 102 3055 29590 9.36 32645 103 3003 28653 9.49 31656 104 3006 27656 9.80 30662 105 2889 26508 9.83 29397 106 2916 26068 10.06 28984 107 3118 25538 10.88 28656 108 2717 24565 9.96 27282 109 2674 23348 10.28 26022 110 2548 22424 10.20 24972 111 2576 22235 10.38 24811 112 2485 21916 10.18 24401 113 2592 21039 10.97 23631 114 2388 20436 10.46 22824 115 2307 19403 10.63 21710 116 2335 18905 10.99 21240 117 2186 18722 10.46 20908 118 2232 18204 10.92 20436 119 2235 17309 11.44 19544 120 2030 16652 10.87 18682 121 2112 16114 11.59 18226 122 1951 15911 10.92 17862 123 1948 15424 11.21 17372 124 1915 14876 11.40 16791 125 1963 14497 11.93 16460 126 1760 14205 11.02 15965 127 1832 13986 11.58 15818 128 1736 13617 11.31 15353 129 1643 13059 11.18 14702 130 1669 12657 11.65 14326 131 1636 12417 11.64 14053 132 1546 12168 11.27 13714 133 1537 11780 11.54 13317 134 1473 11218 11.61 12691 135 1479 11005 11.85 12484 136 1371 10518 11.53 11889 137 1404 10135 12.17 11539 138 1305 10034 11.51 11339 139 1326 9734 11.99 11060 140 1267 9419 11.86 10686 141 1144 9466 10.78 10610 142 1169 9171 11.31 10340 143 1205 8903 11.92 10108 144 1159 8689 11.77 9848 145 1124 8397 11.81 9521 146 1081 8200 11.65 9281 147 1036 8137 11.29 9173 148 1047 7764 11.88 8811 149 986 7834 11.18 8820 150 909 7284 11.09 8193 151 823 5876 12.29 6699