File	Total Reads	Aligned Reads	Unaligned Reads	Ambiguously Aligned Reads	No Genomic Sequence	Duplicate Reads (removed)	Unique Reads (remaining)	Total Cs	Methylated CpGs	Unmethylated CpGs	Methylated chgs	Unmethylated chgs	Methylated CHHs	Unmethylated CHHs
trimmed_POC-47-TP2_S13_pe.bam	151987190	90000040	38018588	23968469	93	14181459	75818581	1337723287	8299945	227408459	4835213	265974904	26288436	804916330
trimmed_POC-48-TP2_S11_pe.bam	177078360	104251054	50943986	21883192	128	23046764	81204290	1679292915	10788747	264448343	5976871	319836726	32297468	1045944760
trimmed_POC-50-TP2_S14_pe.bam	167114293	95287095	44781799	27045312	87	20153057	75134038	1354399842	8691199	231324950	4652695	269968140	24678856	815084002
trimmed_POC-53-TP2_S15_pe.bam	141417553	78836352	42392655	20188453	93	17836700	60999652	1293043583	8438370	225630609	4848892	257708114	23601249	772816349
trimmed_POC-57-TP2_S12_pe.bam	241592172	141174446	71647653	28769841	232	50002051	91172395	2027773994	13006511	308566363	7144626	378910774	38058783	1282086937