CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 615028 2490273 19.81 3105301 2 645957 4165239 13.43 4811196 3 515716 4822826 9.66 5338542 4 426198 3837643 10.00 4263841 5 278756 4878379 5.41 5157135 6 223250 3229949 6.47 3453199 7 216750 3044844 6.65 3261594 8 241221 3230969 6.95 3472190 9 243323 3228478 7.01 3471801 10 246166 3156312 7.23 3402478 11 291631 3196677 8.36 3488308 12 339603 3288978 9.36 3628581 13 281561 3243145 7.99 3524706 14 254406 3262725 7.23 3517131 15 255414 3298850 7.19 3554264 16 259179 3275687 7.33 3534866 17 250481 3287941 7.08 3538422 18 251454 3410994 6.87 3662448 19 250846 3314565 7.04 3565411 20 256280 3410039 6.99 3666319 21 257142 3405628 7.02 3662770 22 256561 3427075 6.96 3683636 23 258069 3433220 6.99 3691289 24 255378 3474970 6.85 3730348 25 254905 3420022 6.94 3674927 26 256023 3429631 6.95 3685654 27 254967 3451444 6.88 3706411 28 256537 3484219 6.86 3740756 29 256485 3453860 6.91 3710345 30 256212 3467769 6.88 3723981 31 254234 3448542 6.87 3702776 32 257740 3482625 6.89 3740365 33 256226 3498502 6.82 3754728 34 252233 3478164 6.76 3730397 35 254017 3492515 6.78 3746532 36 255020 3550591 6.70 3805611 37 255356 3504281 6.79 3759637 38 254345 3508466 6.76 3762811 39 256286 3550070 6.73 3806356 40 252937 3513804 6.72 3766741 41 253962 3499796 6.77 3753758 42 250560 3495274 6.69 3745834 43 249868 3484370 6.69 3734238 44 251755 3526106 6.66 3777861 45 250544 3507184 6.67 3757728 46 250009 3484318 6.69 3734327 47 251107 3489726 6.71 3740833 48 251647 3518825 6.67 3770472 49 249616 3473594 6.70 3723210 50 250384 3464346 6.74 3714730 51 248367 3464264 6.69 3712631 52 249047 3468839 6.70 3717886 53 246047 3426626 6.70 3672673 54 244519 3404428 6.70 3648947 55 244854 3396836 6.72 3641690 56 244838 3413612 6.69 3658450 57 244485 3389144 6.73 3633629 58 241766 3355887 6.72 3597653 59 244075 3357567 6.78 3601642 60 242269 3375577 6.70 3617846 61 238940 3295793 6.76 3534733 62 238087 3286363 6.76 3524450 63 237098 3270734 6.76 3507832 64 236262 3250981 6.78 3487243 65 233835 3216173 6.78 3450008 66 232196 3192093 6.78 3424289 67 230178 3160805 6.79 3390983 68 233010 3175879 6.84 3408889 69 228811 3130605 6.81 3359416 70 225543 3083410 6.82 3308953 71 224714 3067121 6.83 3291835 72 222337 3050783 6.79 3273120 73 220921 3000584 6.86 3221505 74 218105 2962989 6.86 3181094 75 217047 2945295 6.86 3162342 76 215840 2933470 6.85 3149310 77 214583 2877936 6.94 3092519 78 211007 2850728 6.89 3061735 79 209932 2811961 6.95 3021893 80 209576 2789796 6.99 2999372 81 206932 2763773 6.97 2970705 82 203972 2710660 7.00 2914632 83 203009 2687637 7.02 2890646 84 202591 2675613 7.04 2878204 85 198946 2615286 7.07 2814232 86 196261 2583027 7.06 2779288 87 193748 2555328 7.05 2749076 88 191742 2519493 7.07 2711235 89 190684 2482648 7.13 2673332 90 187800 2447304 7.13 2635104 91 185864 2410368 7.16 2596232 92 183759 2391874 7.13 2575633 93 181150 2341651 7.18 2522801 94 178253 2300774 7.19 2479027 95 177610 2272272 7.25 2449882 96 174369 2249200 7.19 2423569 97 170334 2203664 7.17 2373998 98 169102 2169571 7.23 2338673 99 168085 2137446 7.29 2305531 100 166550 2112373 7.31 2278923 101 161944 2064169 7.27 2226113 102 160791 2031276 7.34 2192067 103 159590 1996268 7.40 2155858 104 156489 1975674 7.34 2132163 105 153100 1934062 7.34 2087162 106 151617 1894130 7.41 2045747 107 149599 1868961 7.41 2018560 108 148282 1852180 7.41 2000462 109 145536 1804666 7.46 1950202 110 143669 1772387 7.50 1916056 111 140392 1743749 7.45 1884141 112 139148 1716697 7.50 1855845 113 136884 1684319 7.52 1821203 114 134172 1647968 7.53 1782140 115 132400 1621489 7.55 1753889 116 130608 1602592 7.54 1733200 117 128153 1560622 7.59 1688775 118 125934 1530057 7.60 1655991 119 124177 1507778 7.61 1631955 120 122921 1488197 7.63 1611118 121 120551 1455199 7.65 1575750 122 118963 1427910 7.69 1546873 123 116742 1403140 7.68 1519882 124 115207 1381531 7.70 1496738 125 112545 1345130 7.72 1457675 126 110653 1320388 7.73 1431041 127 109461 1298295 7.78 1407756 128 108189 1276230 7.81 1384419 129 106073 1247886 7.83 1353959 130 104027 1218272 7.87 1322299 131 102250 1196944 7.87 1299194 132 100375 1179589 7.84 1279964 133 98726 1146555 7.93 1245281 134 97612 1124290 7.99 1221902 135 95309 1105112 7.94 1200421 136 93955 1081562 7.99 1175517 137 92395 1055937 8.05 1148332 138 90200 1035690 8.01 1125890 139 88444 1016604 8.00 1105048 140 86961 1000719 8.00 1087680 141 84140 971466 7.97 1055606 142 81849 948972 7.94 1030821 143 79628 932263 7.87 1011891 144 79238 917365 7.95 996603 145 77148 889554 7.98 966702 146 76014 875394 7.99 951408 147 75495 865263 8.02 940758 148 75518 855114 8.11 930632 149 76920 838112 8.41 915032 150 71226 826793 7.93 898019 151 63392 768419 7.62 831811 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 812271 7006318 10.39 7818589 2 505654 2702960 15.76 3208614 3 395193 3830698 9.35 4225891 4 291427 3345282 8.01 3636709 5 114933 4435567 2.53 4550500 6 93005 5721310 1.60 5814315 7 89192 3543227 2.46 3632419 8 93383 3552289 2.56 3645672 9 77399 3627743 2.09 3705142 10 120955 3523633 3.32 3644588 11 142131 3565691 3.83 3707822 12 76853 3655368 2.06 3732221 13 67112 3752541 1.76 3819653 14 80123 3717402 2.11 3797525 15 66087 3738822 1.74 3804909 16 86304 3698879 2.28 3785183 17 60131 3751241 1.58 3811372 18 55400 3808887 1.43 3864287 19 54760 3811962 1.42 3866722 20 59155 3750317 1.55 3809472 21 53263 3790286 1.39 3843549 22 50395 3861803 1.29 3912198 23 48911 3846681 1.26 3895592 24 46138 3849409 1.18 3895547 25 45974 3875127 1.17 3921101 26 46504 3852261 1.19 3898765 27 44517 3854545 1.14 3899062 28 44353 3863336 1.14 3907689 29 45082 3851373 1.16 3896455 30 42026 3862245 1.08 3904271 31 41622 3911532 1.05 3953154 32 41240 3886243 1.05 3927483 33 39980 3920461 1.01 3960441 34 39751 3924190 1.00 3963941 35 39540 3930768 1.00 3970308 36 38262 3946977 0.96 3985239 37 38870 3939548 0.98 3978418 38 40158 3906881 1.02 3947039 39 36672 3938768 0.92 3975440 40 36608 3951790 0.92 3988398 41 36270 3934005 0.91 3970275 42 35711 3974225 0.89 4009936 43 35361 3954221 0.89 3989582 44 35203 3939123 0.89 3974326 45 34893 3954446 0.87 3989339 46 35188 3935901 0.89 3971089 47 36631 3920799 0.93 3957430 48 34434 3940838 0.87 3975272 49 34991 3943898 0.88 3978889 50 34808 3912928 0.88 3947736 51 33938 3918173 0.86 3952111 52 34151 3912642 0.87 3946793 53 34481 3888746 0.88 3923227 54 34055 3870353 0.87 3904408 55 34747 3858128 0.89 3892875 56 36395 3840691 0.94 3877086 57 34432 3847023 0.89 3881455 58 35329 3843391 0.91 3878720 59 35666 3775575 0.94 3811241 60 35014 3777066 0.92 3812080 61 35524 3755949 0.94 3791473 62 35856 3704603 0.96 3740459 63 36056 3692441 0.97 3728497 64 36819 3681571 0.99 3718390 65 38213 3655175 1.03 3693388 66 36299 3639672 0.99 3675971 67 37502 3613381 1.03 3650883 68 37952 3562836 1.05 3600788 69 37380 3539103 1.05 3576483 70 37251 3499369 1.05 3536620 71 38053 3465528 1.09 3503581 72 38123 3440210 1.10 3478333 73 39431 3411653 1.14 3451084 74 40249 3384068 1.18 3424317 75 38629 3340347 1.14 3378976 76 39639 3314826 1.18 3354465 77 39536 3266576 1.20 3306112 78 39106 3238394 1.19 3277500 79 39635 3197580 1.22 3237215 80 40375 3141994 1.27 3182369 81 39725 3122863 1.26 3162588 82 40762 3090810 1.30 3131572 83 42389 3035528 1.38 3077917 84 40948 3018663 1.34 3059611 85 40925 2980476 1.35 3021401 86 40592 2926237 1.37 2966829 87 40559 2900301 1.38 2940860 88 41258 2849087 1.43 2890345 89 41455 2810353 1.45 2851808 90 40976 2784617 1.45 2825593 91 41726 2734114 1.50 2775840 92 43047 2688357 1.58 2731404 93 41104 2663061 1.52 2704165 94 41463 2622897 1.56 2664360 95 41142 2576033 1.57 2617175 96 40675 2548445 1.57 2589120 97 40541 2505482 1.59 2546023 98 40985 2460043 1.64 2501028 99 40367 2419320 1.64 2459687 100 40506 2377425 1.68 2417931 101 40789 2336601 1.72 2377390 102 39669 2303651 1.69 2343320 103 40237 2272794 1.74 2313031 104 39717 2229539 1.75 2269256 105 39236 2205118 1.75 2244354 106 39353 2161941 1.79 2201294 107 38941 2122366 1.80 2161307 108 38694 2085785 1.82 2124479 109 38974 2046868 1.87 2085842 110 39662 2007149 1.94 2046811 111 38311 1982235 1.90 2020546 112 38423 1949039 1.93 1987462 113 37823 1911237 1.94 1949060 114 37382 1882208 1.95 1919590 115 36741 1838281 1.96 1875022 116 37025 1806144 2.01 1843169 117 36297 1771532 2.01 1807829 118 36628 1743132 2.06 1779760 119 36851 1708200 2.11 1745051 120 35469 1683197 2.06 1718666 121 35696 1659808 2.11 1695504 122 35463 1623865 2.14 1659328 123 34796 1597248 2.13 1632044 124 34544 1556550 2.17 1591094 125 34572 1525013 2.22 1559585 126 33978 1498151 2.22 1532129 127 33863 1472041 2.25 1505904 128 34182 1437112 2.32 1471294 129 33144 1415240 2.29 1448384 130 32743 1389107 2.30 1421850 131 32574 1354826 2.35 1387400 132 32286 1333796 2.36 1366082 133 31731 1301350 2.38 1333081 134 31746 1272956 2.43 1304702 135 30819 1249549 2.41 1280368 136 30795 1224300 2.45 1255095 137 30683 1199834 2.49 1230517 138 29757 1177586 2.46 1207343 139 29564 1151714 2.50 1181278 140 29201 1123771 2.53 1152972 141 28358 1105856 2.50 1134214 142 27814 1078323 2.51 1106137 143 27459 1054942 2.54 1082401 144 27071 1033271 2.55 1060342 145 27289 1014443 2.62 1041732 146 27152 999574 2.64 1026726 147 26904 984833 2.66 1011737 148 26637 965858 2.68 992495 149 27921 946512 2.87 974433 150 30171 958426 3.05 988597 151 40140 873496 4.39 913636 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 2246609 7311035 23.51 9557644 2 2118159 9773475 17.81 11891634 3 1545212 8903436 14.79 10448648 4 1415469 8444800 14.36 9860269 5 696708 10207230 6.39 10903938 6 625718 11779822 5.04 12405540 7 572883 13395727 4.10 13968610 8 567179 12983996 4.19 13551175 9 468376 12605120 3.58 13073496 10 445487 12354162 3.48 12799649 11 489165 12202071 3.85 12691236 12 422465 12113052 3.37 12535517 13 403258 12113728 3.22 12516986 14 405232 12121840 3.23 12527072 15 403866 12147171 3.22 12551037 16 444699 12138482 3.53 12583181 17 390219 12057542 3.13 12447761 18 345880 12074602 2.78 12420482 19 363902 12093518 2.92 12457420 20 384264 12163832 3.06 12548096 21 349384 12243269 2.77 12592653 22 341689 12250524 2.71 12592213 23 335359 12310703 2.65 12646062 24 310211 12356936 2.45 12667147 25 305307 12413184 2.40 12718491 26 320482 12517604 2.50 12838086 27 295201 12519087 2.30 12814288 28 297807 12565277 2.32 12863084 29 313060 12602551 2.42 12915611 30 275768 12655665 2.13 12931433 31 291762 12726134 2.24 13017896 32 287574 12770778 2.20 13058352 33 268064 12773144 2.06 13041208 34 273426 12793818 2.09 13067244 35 280474 12842813 2.14 13123287 36 246856 12895933 1.88 13142789 37 257607 12877738 1.96 13135345 38 264553 12902688 2.01 13167241 39 251448 12911708 1.91 13163156 40 245900 12945079 1.86 13190979 41 249966 13007584 1.89 13257550 42 228410 13034434 1.72 13262844 43 232604 13011161 1.76 13243765 44 246900 13016441 1.86 13263341 45 211145 13015091 1.60 13226236 46 220711 13018733 1.67 13239444 47 232728 12956019 1.76 13188747 48 205323 12912219 1.57 13117542 49 218359 12903985 1.66 13122344 50 211263 12902989 1.61 13114252 51 199896 12879683 1.53 13079579 52 200731 12844520 1.54 13045251 53 213202 12802442 1.64 13015644 54 188905 12761777 1.46 12950682 55 194323 12759597 1.50 12953920 56 203413 12683221 1.58 12886634 57 188829 12602899 1.48 12791728 58 194972 12550119 1.53 12745091 59 201510 12479866 1.59 12681376 60 176762 12429296 1.40 12606058 61 186454 12349535 1.49 12535989 62 200199 12302304 1.60 12502503 63 180486 12190136 1.46 12370622 64 191534 12131935 1.55 12323469 65 194630 12048309 1.59 12242939 66 179767 11935702 1.48 12115469 67 191744 11842634 1.59 12034378 68 189520 11730925 1.59 11920445 69 184332 11630322 1.56 11814654 70 181683 11524056 1.55 11705739 71 198670 11443889 1.71 11642559 72 177505 11313922 1.54 11491427 73 189372 11180774 1.67 11370146 74 199773 11102296 1.77 11302069 75 182755 10979387 1.64 11162142 76 190994 10849600 1.73 11040594 77 191640 10718160 1.76 10909800 78 179048 10603797 1.66 10782845 79 188908 10483073 1.77 10671981 80 193042 10335379 1.83 10528421 81 180847 10235535 1.74 10416382 82 187932 10110327 1.82 10298259 83 194784 9999826 1.91 10194610 84 184558 9886636 1.83 10071194 85 187290 9752888 1.88 9940178 86 189909 9633216 1.93 9823125 87 182486 9489598 1.89 9672084 88 183901 9348762 1.93 9532663 89 196874 9217733 2.09 9414607 90 178271 9090797 1.92 9269068 91 188890 8952411 2.07 9141301 92 193467 8828448 2.14 9021915 93 181877 8702467 2.05 8884344 94 191174 8584581 2.18 8775755 95 186720 8463457 2.16 8650177 96 176679 8329483 2.08 8506162 97 179471 8196276 2.14 8375747 98 185923 8073606 2.25 8259529 99 176840 7932671 2.18 8109511 100 176107 7802141 2.21 7978248 101 183611 7679799 2.34 7863410 102 172800 7552580 2.24 7725380 103 177972 7447357 2.33 7625329 104 179519 7333673 2.39 7513192 105 167503 7219264 2.27 7386767 106 170938 7090629 2.35 7261567 107 176645 6964353 2.47 7140998 108 163380 6829832 2.34 6993212 109 170209 6708677 2.47 6878886 110 170507 6599837 2.52 6770344 111 164772 6483314 2.48 6648086 112 166080 6375211 2.54 6541291 113 165972 6273080 2.58 6439052 114 160206 6162409 2.53 6322615 115 159041 6057662 2.56 6216703 116 163829 5952267 2.68 6116096 117 153112 5825423 2.56 5978535 118 156201 5726255 2.66 5882456 119 161435 5619403 2.79 5780838 120 150127 5510195 2.65 5660322 121 153797 5413971 2.76 5567768 122 152993 5327580 2.79 5480573 123 147039 5229559 2.73 5376598 124 149847 5129072 2.84 5278919 125 149716 5028931 2.89 5178647 126 141015 4923989 2.78 5065004 127 144110 4831322 2.90 4975432 128 145693 4739763 2.98 4885456 129 139709 4638404 2.92 4778113 130 139292 4552413 2.97 4691705 131 139782 4458549 3.04 4598331 132 133414 4377244 2.96 4510658 133 134351 4291525 3.04 4425876 134 138173 4202412 3.18 4340585 135 128129 4114614 3.02 4242743 136 130988 4028974 3.15 4159962 137 130859 3952053 3.21 4082912 138 124969 3872820 3.13 3997789 139 126495 3787557 3.23 3914052 140 123329 3709701 3.22 3833030 141 119117 3633284 3.17 3752401 142 119666 3562246 3.25 3681912 143 121340 3487257 3.36 3608597 144 117233 3413549 3.32 3530782 145 116719 3348544 3.37 3465263 146 117667 3303308 3.44 3420975 147 114556 3246975 3.41 3361531 148 115676 3196162 3.49 3311838 149 115488 3136541 3.55 3252029 150 111645 3135060 3.44 3246705 151 142244 2879947 4.71 3022191 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 141884 580136 19.65 722020 2 140464 948530 12.90 1088994 3 113149 1043482 9.78 1156631 4 96933 823166 10.54 920099 5 61713 1038151 5.61 1099864 6 47993 636969 7.01 684962 7 45919 601663 7.09 647582 8 53609 602221 8.17 655830 9 49262 588057 7.73 637319 10 52066 562249 8.48 614315 11 64411 560256 10.31 624667 12 82165 562508 12.75 644673 13 60576 538982 10.10 599558 14 48393 528794 8.38 577187 15 48439 529190 8.39 577629 16 48958 513367 8.71 562325 17 45499 507795 8.22 553294 18 45377 500183 8.32 545560 19 44570 484492 8.42 529062 20 44583 488560 8.36 533143 21 43277 474411 8.36 517688 22 42505 465164 8.37 507669 23 41321 454650 8.33 495971 24 40468 449752 8.26 490220 25 39325 433171 8.32 472496 26 38250 425146 8.25 463396 27 37545 421073 8.19 458618 28 37502 416931 8.25 454433 29 36417 401702 8.31 438119 30 34854 393855 8.13 428709 31 34366 385586 8.18 419952 32 33919 381821 8.16 415740 33 32929 374252 8.09 407181 34 31554 364308 7.97 395862 35 30887 358207 7.94 389094 36 30584 359605 7.84 390189 37 30228 345327 8.05 375555 38 28979 337903 7.90 366882 39 28881 335543 7.93 364424 40 27707 327802 7.79 355509 41 27493 319168 7.93 346661 42 26159 310203 7.78 336362 43 25797 305245 7.79 331042 44 25759 307161 7.74 332920 45 24938 294348 7.81 319286 46 24177 288161 7.74 312338 47 23846 282392 7.79 306238 48 23411 282427 7.65 305838 49 22600 271523 7.68 294123 50 22191 267607 7.66 289798 51 21774 263522 7.63 285296 52 21264 261596 7.52 282860 53 20892 251610 7.67 272502 54 19929 245668 7.50 265597 55 20046 243111 7.62 263157 56 19666 240826 7.55 260492 57 19123 233444 7.57 252567 58 18967 228201 7.67 247168 59 18674 224921 7.67 243595 60 18069 224864 7.44 242933 61 18178 215753 7.77 233931 62 17669 212216 7.69 229885 63 16874 207397 7.52 224271 64 16851 205032 7.59 221883 65 16234 197916 7.58 214150 66 15908 193998 7.58 209906 67 15970 190391 7.74 206361 68 15852 190919 7.67 206771 69 15400 182902 7.77 198302 70 14634 177343 7.62 191977 71 14249 175029 7.53 189278 72 14199 173210 7.58 187409 73 14120 167861 7.76 181981 74 13953 162778 7.90 176731 75 13810 161636 7.87 175446 76 13576 161696 7.75 175272 77 13126 154033 7.85 167159 78 12677 150578 7.77 163255 79 12437 146694 7.82 159131 80 12399 147011 7.78 159410 81 12129 142123 7.86 154252 82 11891 138582 7.90 150473 83 11667 135688 7.92 147355 84 11640 136145 7.88 147785 85 11044 129793 7.84 140837 86 11099 127779 7.99 138878 87 10537 125569 7.74 136106 88 10528 124102 7.82 134630 89 10415 120095 7.98 130510 90 10185 117403 7.98 127588 91 9842 114643 7.91 124485 92 9807 114816 7.87 124623 93 9638 110061 8.05 119699 94 9482 107135 8.13 116617 95 9052 105498 7.90 114550 96 8623 105345 7.57 113968 97 8712 100546 7.97 109258 98 8540 98594 7.97 107134 99 8518 97738 8.02 106256 100 8358 96697 7.96 105055 101 8176 92882 8.09 101058 102 8003 90975 8.09 98978 103 7893 88855 8.16 96748 104 7817 88618 8.11 96435 105 7743 86464 8.22 94207 106 7340 83477 8.08 90817 107 7184 81956 8.06 89140 108 7182 82164 8.04 89346 109 6835 78147 8.04 84982 110 6737 76624 8.08 83361 111 6630 75754 8.05 82384 112 6748 74438 8.31 81186 113 6575 72966 8.27 79541 114 6254 70792 8.12 77046 115 6326 69689 8.32 76015 116 6210 69671 8.18 75881 117 5886 66387 8.14 72273 118 5979 65374 8.38 71353 119 5868 64308 8.36 70176 120 5607 63546 8.11 69153 121 5562 61789 8.26 67351 122 5440 60887 8.20 66327 123 5198 59625 8.02 64823 124 5414 59242 8.37 64656 125 5222 57071 8.38 62293 126 5059 55728 8.32 60787 127 5013 54647 8.40 59660 128 4956 53986 8.41 58942 129 4840 52923 8.38 57763 130 4720 51346 8.42 56066 131 4649 51141 8.33 55790 132 4510 50488 8.20 54998 133 4443 48574 8.38 53017 134 4378 47780 8.39 52158 135 4169 47038 8.14 51207 136 4338 46114 8.60 50452 137 4140 44940 8.44 49080 138 3925 43700 8.24 47625 139 4072 43282 8.60 47354 140 4099 43424 8.63 47523 141 3786 41605 8.34 45391 142 3769 40271 8.56 44040 143 3642 39659 8.41 43301 144 3704 39569 8.56 43273 145 3522 38523 8.38 42045 146 3460 37059 8.54 40519 147 3470 36532 8.67 40002 148 3288 36604 8.24 39892 149 3292 34694 8.67 37986 150 3001 33169 8.30 36170 151 2190 27454 7.39 29644 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 198030 1622119 10.88 1820149 2 111814 615643 15.37 727457 3 93830 778599 10.76 872429 4 67062 699657 8.75 766719 5 31460 933257 3.26 964717 6 26102 1198858 2.13 1224960 7 22878 696948 3.18 719826 8 23941 672589 3.44 696530 9 22041 671685 3.18 693726 10 31334 636069 4.69 667403 11 49876 623995 7.40 673871 12 19835 623772 3.08 643607 13 18364 629182 2.84 647546 14 16625 610526 2.65 627151 15 17608 601469 2.84 619077 16 20814 582623 3.45 603437 17 14640 573325 2.49 587965 18 14974 573874 2.54 588848 19 15161 552348 2.67 567509 20 15813 535441 2.87 551254 21 13669 527708 2.52 541377 22 12469 520651 2.34 533120 23 11944 511148 2.28 523092 24 11176 502643 2.18 513819 25 10747 495116 2.12 505863 26 10396 486143 2.09 496539 27 10155 472979 2.10 483134 28 9921 464315 2.09 474236 29 10150 451985 2.20 462135 30 8579 445735 1.89 454314 31 8394 442330 1.86 450724 32 7950 429300 1.82 437250 33 7444 425035 1.72 432479 34 7209 417238 1.70 424447 35 7032 409644 1.69 416676 36 6540 403916 1.59 410456 37 6575 393067 1.65 399642 38 7364 381458 1.89 388822 39 5826 378536 1.52 384362 40 5534 373366 1.46 378900 41 5201 364605 1.41 369806 42 4794 361807 1.31 366601 43 4730 352771 1.32 357501 44 4596 345400 1.31 349996 45 4380 339290 1.27 343670 46 4387 331738 1.31 336125 47 5052 324801 1.53 329853 48 3729 322079 1.14 325808 49 3616 317593 1.13 321209 50 3446 309538 1.10 312984 51 3329 304436 1.08 307765 52 3226 299011 1.07 302237 53 3122 292325 1.06 295447 54 2841 286759 0.98 289600 55 3011 281195 1.06 284206 56 3541 277126 1.26 280667 57 2543 271937 0.93 274480 58 2529 270254 0.93 272783 59 2502 260339 0.95 262841 60 2275 256557 0.88 258832 61 2176 251035 0.86 253211 62 2213 244717 0.90 246930 63 2069 240818 0.85 242887 64 2347 237135 0.98 239482 65 2963 233170 1.25 236133 66 2009 228761 0.87 230770 67 1849 223311 0.82 225160 68 1795 218852 0.81 220647 69 1843 214007 0.85 215850 70 1753 208663 0.83 210416 71 1855 204179 0.90 206034 72 1767 200075 0.88 201842 73 1965 198363 0.98 200328 74 2478 196469 1.25 198947 75 1714 189130 0.90 190844 76 1613 185028 0.86 186641 77 1619 180653 0.89 182272 78 1476 177629 0.82 179105 79 1551 173239 0.89 174790 80 1527 168665 0.90 170192 81 1543 166427 0.92 167970 82 1753 163872 1.06 165625 83 2228 159670 1.38 161898 84 1478 157663 0.93 159141 85 1357 154847 0.87 156204 86 1411 150117 0.93 151528 87 1290 148588 0.86 149878 88 1307 143640 0.90 144947 89 1415 140753 1.00 142168 90 1321 140033 0.93 141354 91 1514 134994 1.11 136508 92 1988 131545 1.49 133533 93 1246 129679 0.95 130925 94 1226 128442 0.95 129668 95 1176 124326 0.94 125502 96 1093 122876 0.88 123969 97 1082 119461 0.90 120543 98 1163 117338 0.98 118501 99 1023 113930 0.89 114953 100 1268 111966 1.12 113234 101 1753 108763 1.59 110516 102 1134 107116 1.05 108250 103 1022 106806 0.95 107828 104 1062 103289 1.02 104351 105 964 102251 0.93 103215 106 1005 100651 0.99 101656 107 1002 97205 1.02 98207 108 964 95456 1.00 96420 109 1221 92608 1.30 93829 110 1422 90220 1.55 91642 111 954 90088 1.05 91042 112 971 89021 1.08 89992 113 933 87111 1.06 88044 114 884 86207 1.02 87091 115 822 82230 0.99 83052 116 866 80412 1.07 81278 117 832 79006 1.04 79838 118 983 77508 1.25 78491 119 1223 75866 1.59 77089 120 838 74992 1.11 75830 121 853 74154 1.14 75007 122 828 72439 1.13 73267 123 753 71660 1.04 72413 124 806 68987 1.15 69793 125 731 67460 1.07 68191 126 707 66631 1.05 67338 127 812 65201 1.23 66013 128 1029 63230 1.60 64259 129 760 62336 1.20 63096 130 735 61632 1.18 62367 131 736 59290 1.23 60026 132 650 59590 1.08 60240 133 620 57088 1.07 57708 134 655 56396 1.15 57051 135 588 54957 1.06 55545 136 710 54007 1.30 54717 137 939 52779 1.75 53718 138 607 52864 1.14 53471 139 629 51053 1.22 51682 140 642 49686 1.28 50328 141 598 49211 1.20 49809 142 543 47975 1.12 48518 143 504 47396 1.05 47900 144 517 46221 1.11 46738 145 647 45086 1.41 45733 146 711 44617 1.57 45328 147 505 43656 1.14 44161 148 508 43002 1.17 43510 149 464 40989 1.12 41453 150 470 39955 1.16 40425 151 358 32615 1.09 32973 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 482046 1612438 23.02 2094484 2 462196 2177954 17.51 2640150 3 344353 1858536 15.63 2202889 4 316181 1721355 15.52 2037536 5 166819 2087196 7.40 2254015 6 155740 2386187 6.13 2541927 7 129395 2697879 4.58 2827274 8 152090 2527610 5.68 2679700 9 102310 2422708 4.05 2525018 10 101945 2310130 4.23 2412075 11 113479 2202133 4.90 2315612 12 98959 2131907 4.44 2230866 13 90416 2098964 4.13 2189380 14 90902 2070789 4.21 2161691 15 89484 2048491 4.19 2137975 16 106318 1993120 5.06 2099438 17 86015 1958380 4.21 2044395 18 75526 1905350 3.81 1980876 19 81965 1870631 4.20 1952596 20 79891 1838302 4.16 1918193 21 74221 1798303 3.96 1872524 22 72255 1767512 3.93 1839767 23 69517 1744964 3.83 1814481 24 61193 1714357 3.45 1775550 25 58278 1689062 3.34 1747340 26 62793 1672307 3.62 1735100 27 53892 1634104 3.19 1687996 28 53611 1604596 3.23 1658207 29 58141 1575453 3.56 1633594 30 46592 1547088 2.92 1593680 31 51369 1525384 3.26 1576753 32 49786 1498583 3.22 1548369 33 44066 1472653 2.91 1516719 34 45217 1445266 3.03 1490483 35 47244 1421687 3.22 1468931 36 37040 1402823 2.57 1439863 37 39894 1370729 2.83 1410623 38 41165 1349255 2.96 1390420 39 37687 1323782 2.77 1361469 40 36552 1300615 2.73 1337167 41 36633 1282360 2.78 1318993 42 30994 1263634 2.39 1294628 43 32452 1235274 2.56 1267726 44 37821 1214216 3.02 1252037 45 27355 1196995 2.23 1224350 46 29550 1182630 2.44 1212180 47 32910 1155179 2.77 1188089 48 25598 1131651 2.21 1157249 49 30020 1111766 2.63 1141786 50 27377 1093810 2.44 1121187 51 23462 1075296 2.14 1098758 52 24773 1057090 2.29 1081863 53 28353 1035057 2.67 1063410 54 21089 1017701 2.03 1038790 55 21774 1005328 2.12 1027102 56 24600 986520 2.43 1011120 57 20783 961984 2.11 982767 58 22678 947025 2.34 969703 59 23514 928986 2.47 952500 60 16370 911737 1.76 928107 61 18945 894686 2.07 913631 62 22675 878724 2.52 901399 63 16387 860147 1.87 876534 64 18907 847011 2.18 865918 65 19491 831183 2.29 850674 66 15547 815268 1.87 830815 67 18844 798364 2.31 817208 68 17489 780638 2.19 798127 69 15348 763562 1.97 778910 70 15266 749165 2.00 764431 71 19394 736607 2.57 756001 72 13292 716533 1.82 729825 73 15385 703181 2.14 718566 74 18447 692064 2.60 710511 75 13553 679175 1.96 692728 76 16109 663050 2.37 679159 77 15922 648651 2.40 664573 78 11805 634579 1.83 646384 79 14518 621030 2.28 635548 80 15784 608573 2.53 624357 81 11800 595376 1.94 607176 82 13247 584793 2.22 598040 83 15602 574319 2.64 589921 84 12787 565479 2.21 578266 85 13533 553898 2.38 567431 86 13842 543826 2.48 557668 87 11252 530892 2.08 542144 88 11653 519590 2.19 531243 89 15377 509247 2.93 524624 90 9463 497973 1.86 507436 91 11363 486921 2.28 498284 92 13238 478148 2.69 491386 93 10705 468648 2.23 479353 94 13031 462102 2.74 475133 95 11774 455008 2.52 466782 96 9135 443056 2.02 452191 97 10595 433717 2.38 444312 98 12381 426444 2.82 438825 99 9608 416894 2.25 426502 100 9461 408233 2.27 417694 101 11376 400810 2.76 412186 102 9349 392298 2.33 401647 103 10965 386211 2.76 397176 104 10919 381112 2.79 392031 105 7741 372820 2.03 380561 106 9043 366909 2.41 375952 107 11252 356288 3.06 367540 108 7367 348682 2.07 356049 109 9164 341678 2.61 350842 110 9517 335714 2.76 345231 111 7948 328419 2.36 336367 112 9126 322055 2.76 331181 113 8953 317614 2.74 326567 114 7477 312968 2.33 320445 115 7545 305849 2.41 313394 116 9211 299944 2.98 309155 117 6731 290506 2.26 297237 118 7256 286198 2.47 293454 119 8936 281268 3.08 290204 120 6306 275092 2.24 281398 121 7787 270015 2.80 277802 122 7740 266650 2.82 274390 123 6238 261311 2.33 267549 124 7103 257223 2.69 264326 125 7719 250187 2.99 257906 126 5729 244769 2.29 250498 127 6656 240164 2.70 246820 128 7159 235641 2.95 242800 129 6194 230947 2.61 237141 130 6449 226891 2.76 233340 131 6488 222232 2.84 228720 132 5189 218388 2.32 223577 133 5956 215635 2.69 221591 134 7041 210297 3.24 217338 135 4821 206032 2.29 210853 136 5373 201153 2.60 206526 137 6125 196740 3.02 202865 138 4852 193988 2.44 198840 139 5722 190725 2.91 196447 140 5200 186521 2.71 191721 141 4462 183420 2.37 187882 142 4915 179946 2.66 184861 143 5516 176551 3.03 182067 144 4467 172396 2.53 176863 145 4550 168229 2.63 172779 146 4832 165937 2.83 170769 147 4340 163590 2.58 167930 148 4662 159504 2.84 164166 149 4491 154971 2.82 159462 150 3077 149277 2.02 152354 151 3062 120826 2.47 123888