CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 90156 260928 25.68 351084 2 96132 508062 15.91 604194 3 83049 525859 13.64 608908 4 64639 417705 13.40 482344 5 37274 571434 6.12 608708 6 30358 348738 8.01 379096 7 29339 338119 7.98 367458 8 29769 354238 7.75 384007 9 31318 348075 8.25 379393 10 32140 344778 8.53 376918 11 32748 348856 8.58 381604 12 32286 362622 8.18 394908 13 32352 355121 8.35 387473 14 32473 354920 8.38 387393 15 32005 369254 7.98 401259 16 32742 360129 8.33 392871 17 32305 365474 8.12 397779 18 31789 382827 7.67 414616 19 31141 372632 7.71 403773 20 31949 384273 7.68 416222 21 31538 380218 7.66 411756 22 31970 389334 7.59 421304 23 32213 392699 7.58 424912 24 31304 392055 7.39 423359 25 31519 388754 7.50 420273 26 31617 392603 7.45 424220 27 31328 398648 7.29 429976 28 31952 406459 7.29 438411 29 31662 408095 7.20 439757 30 32087 408835 7.28 440922 31 31292 405654 7.16 436946 32 31926 409999 7.22 441925 33 31583 412266 7.12 443849 34 30356 410637 6.88 440993 35 30630 412220 6.92 442850 36 31047 421996 6.85 453043 37 31234 417926 6.95 449160 38 30659 418335 6.83 448994 39 30737 429793 6.67 460530 40 30005 418737 6.69 448742 41 30151 420220 6.69 450371 42 29567 416644 6.63 446211 43 29776 417548 6.66 447324 44 30368 425860 6.66 456228 45 30059 420567 6.67 450626 46 30154 417719 6.73 447873 47 30685 424443 6.74 455128 48 30399 424060 6.69 454459 49 29678 421187 6.58 450865 50 30097 421656 6.66 451753 51 29679 421816 6.57 451495 52 30470 428385 6.64 458855 53 29815 419983 6.63 449798 54 29369 419995 6.54 449364 55 29247 421686 6.49 450933 56 29480 420075 6.56 449555 57 29577 418994 6.59 448571 58 29483 418027 6.59 447510 59 29729 421328 6.59 451057 60 29363 424417 6.47 453780 61 29188 417641 6.53 446829 62 29376 417306 6.58 446682 63 29127 418620 6.51 447747 64 29270 414702 6.59 443972 65 29359 411777 6.66 441136 66 28966 411530 6.58 440496 67 28801 410878 6.55 439679 68 29761 414599 6.70 444360 69 28601 411462 6.50 440063 70 28556 406165 6.57 434721 71 28443 410044 6.49 438487 72 28574 406802 6.56 435376 73 28545 401422 6.64 429967 74 28108 398622 6.59 426730 75 28387 401929 6.60 430316 76 28470 403728 6.59 432198 77 28282 393872 6.70 422154 78 27689 393533 6.57 421222 79 27658 391716 6.60 419374 80 27733 390736 6.63 418469 81 28328 388615 6.79 416943 82 28064 383738 6.81 411802 83 27851 383137 6.78 410988 84 28036 386001 6.77 414037 85 27837 377241 6.87 405078 86 27359 376135 6.78 403494 87 26671 377764 6.59 404435 88 26984 372268 6.76 399252 89 27271 369155 6.88 396426 90 27190 367961 6.88 395151 91 26735 362565 6.87 389300 92 26928 363965 6.89 390893 93 27021 358557 7.01 385578 94 26522 354348 6.96 380870 95 26648 356144 6.96 382792 96 25988 353753 6.84 379741 97 25825 348440 6.90 374265 98 25606 346651 6.88 372257 99 25635 343015 6.95 368650 100 25568 342145 6.95 367713 101 25768 337041 7.10 362809 102 25527 334496 7.09 360023 103 25298 335482 7.01 360780 104 24974 333176 6.97 358150 105 24761 328250 7.01 353011 106 25082 325830 7.15 350912 107 24861 322751 7.15 347612 108 24595 323348 7.07 347943 109 24486 317108 7.17 341594 110 24470 314350 7.22 338820 111 24052 314435 7.11 338487 112 24092 309097 7.23 333189 113 23653 305910 7.18 329563 114 23770 303151 7.27 326921 115 23570 302524 7.23 326094 116 23626 302029 7.25 325655 117 23382 295571 7.33 318953 118 23323 292568 7.38 315891 119 23104 293310 7.30 316414 120 23183 290211 7.40 313394 121 22756 284619 7.40 307375 122 22770 283806 7.43 306576 123 22620 283204 7.40 305824 124 22127 279564 7.33 301691 125 21836 277527 7.29 299363 126 21854 275859 7.34 297713 127 22078 274579 7.44 296657 128 22281 270821 7.60 293102 129 21796 267540 7.53 289336 130 21694 263348 7.61 285042 131 21189 262772 7.46 283961 132 21074 260213 7.49 281287 133 21189 255990 7.64 277179 134 21183 255452 7.66 276635 135 20964 255389 7.59 276353 136 20792 251048 7.65 271840 137 20613 246804 7.71 267417 138 20435 243235 7.75 263670 139 20318 242873 7.72 263191 140 20363 241307 7.78 261670 141 19567 235108 7.68 254675 142 20159 232972 7.96 253131 143 19376 231971 7.71 251347 144 19240 229285 7.74 248525 145 19267 224759 7.90 244026 146 19355 225727 7.90 245082 147 19302 225476 7.89 244778 148 19359 224103 7.95 243462 149 19822 220077 8.26 239899 150 18791 215697 8.01 234488 151 15066 186952 7.46 202018 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 115189 924387 11.08 1039576 2 75668 255251 22.87 330919 3 47940 401185 10.67 449125 4 41954 393765 9.63 435719 5 16864 537725 3.04 554589 6 15918 693385 2.24 709303 7 15407 412459 3.60 427866 8 15782 413270 3.68 429052 9 13170 422829 3.02 435999 10 16599 408323 3.91 424922 11 13070 414045 3.06 427115 12 12930 428501 2.93 441431 13 11432 437539 2.55 448971 14 15329 430192 3.44 445521 15 11097 439268 2.46 450365 16 13618 440473 3.00 454091 17 9797 444328 2.16 454125 18 8611 458828 1.84 467439 19 8301 464852 1.75 473153 20 9456 451745 2.05 461201 21 7948 455045 1.72 462993 22 7831 467181 1.65 475012 23 7588 465866 1.60 473454 24 6887 467544 1.45 474431 25 7069 475406 1.47 482475 26 6766 473048 1.41 479814 27 6607 474322 1.37 480929 28 6559 477078 1.36 483637 29 6617 469909 1.39 476526 30 6062 472040 1.27 478102 31 5977 483116 1.22 489093 32 5896 477776 1.22 483672 33 5443 484207 1.11 489650 34 5463 486087 1.11 491550 35 5245 485119 1.07 490364 36 5310 485709 1.08 491019 37 5165 487092 1.05 492257 38 5377 486071 1.09 491448 39 4779 489329 0.97 494108 40 4718 491820 0.95 496538 41 4636 488638 0.94 493274 42 4358 495167 0.87 499525 43 4357 491478 0.88 495835 44 4375 490297 0.88 494672 45 4365 491963 0.88 496328 46 4190 490375 0.85 494565 47 4440 491024 0.90 495464 48 4016 495809 0.80 499825 49 3990 495296 0.80 499286 50 3919 492605 0.79 496524 51 3730 494204 0.75 497934 52 3630 496603 0.73 500233 53 3777 496054 0.76 499831 54 3816 492228 0.77 496044 55 3579 490473 0.72 494052 56 3956 493290 0.80 497246 57 3712 497171 0.74 500883 58 3676 496455 0.74 500131 59 3600 488526 0.73 492126 60 3595 493816 0.72 497411 61 3740 492498 0.75 496238 62 3572 486286 0.73 489858 63 3699 484687 0.76 488386 64 3856 485929 0.79 489785 65 4039 485234 0.83 489273 66 3690 483920 0.76 487610 67 3888 482770 0.80 486658 68 3843 482882 0.79 486725 69 3842 479448 0.79 483290 70 3782 477575 0.79 481357 71 3999 473179 0.84 477178 72 3982 471841 0.84 475823 73 4054 473886 0.85 477940 74 4446 473508 0.93 477954 75 3913 465511 0.83 469424 76 4104 465557 0.87 469661 77 3973 461991 0.85 465964 78 3928 461322 0.84 465250 79 4204 460200 0.91 464404 80 4188 454367 0.91 458555 81 4324 453651 0.94 457975 82 4431 453183 0.97 457614 83 4478 448836 0.99 453314 84 4360 449403 0.96 453763 85 4507 446010 1.00 450517 86 4460 439384 1.00 443844 87 4243 440241 0.95 444484 88 4534 434792 1.03 439326 89 4619 432708 1.06 437327 90 4757 430142 1.09 434899 91 4699 425686 1.09 430385 92 4936 421974 1.16 426910 93 4606 422442 1.08 427048 94 4732 419637 1.12 424369 95 4862 415736 1.16 420598 96 4696 414301 1.12 418997 97 4754 411552 1.14 416306 98 4834 406509 1.18 411343 99 5078 404615 1.24 409693 100 5082 400803 1.25 405885 101 5278 394952 1.32 400230 102 4894 393797 1.23 398691 103 4971 393571 1.25 398542 104 5132 388103 1.31 393235 105 5086 388283 1.29 393369 106 5152 385628 1.32 390780 107 5151 379863 1.34 385014 108 5316 376947 1.39 382263 109 5369 371092 1.43 376461 110 5454 367880 1.46 373334 111 5303 366573 1.43 371876 112 5408 364802 1.46 370210 113 5407 360567 1.48 365974 114 5289 358477 1.45 363766 115 5451 354738 1.51 360189 116 5380 351527 1.51 356907 117 5532 350416 1.55 355948 118 5639 345831 1.60 351470 119 5850 341687 1.68 347537 120 5319 339166 1.54 344485 121 5798 341131 1.67 346929 122 5716 335954 1.67 341670 123 5419 331962 1.61 337381 124 5544 328121 1.66 333665 125 5573 325963 1.68 331536 126 5671 323688 1.72 329359 127 5530 319716 1.70 325246 128 5570 315436 1.74 321006 129 5466 312750 1.72 318216 130 5540 310170 1.75 315710 131 5597 306455 1.79 312052 132 5713 306283 1.83 311996 133 5758 300314 1.88 306072 134 5577 298749 1.83 304326 135 5651 295025 1.88 300676 136 5705 293341 1.91 299046 137 5607 290440 1.89 296047 138 5633 286256 1.93 291889 139 5714 283468 1.98 289182 140 5599 280119 1.96 285718 141 5601 279976 1.96 285577 142 5629 275947 2.00 281576 143 5557 272526 2.00 278083 144 5730 269401 2.08 275131 145 5719 267829 2.09 273548 146 5883 266558 2.16 272441 147 5815 262598 2.17 268413 148 5979 261700 2.23 267679 149 6114 257907 2.32 264021 150 6938 256251 2.64 263189 151 7565 219359 3.33 226924 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 345473 823575 29.55 1169048 2 354762 1199401 22.83 1554163 3 252445 1095370 18.73 1347815 4 230712 1083568 17.55 1314280 5 98799 1344669 6.84 1443468 6 90605 1539856 5.56 1630461 7 92161 1744754 5.02 1836915 8 80102 1727512 4.43 1807614 9 80145 1682381 4.55 1762526 10 71746 1679917 4.10 1751663 11 75543 1675029 4.32 1750572 12 66073 1671162 3.80 1737235 13 63310 1671618 3.65 1734928 14 62689 1673875 3.61 1736564 15 57116 1669777 3.31 1726893 16 58176 1670466 3.37 1728642 17 55373 1657818 3.23 1713191 18 46310 1653738 2.72 1700048 19 47737 1644381 2.82 1692118 20 50984 1640200 3.01 1691184 21 46132 1630056 2.75 1676188 22 44380 1619265 2.67 1663645 23 42593 1626108 2.55 1668701 24 41633 1621933 2.50 1663566 25 38570 1625580 2.32 1664150 26 41010 1621230 2.47 1662240 27 37517 1607694 2.28 1645211 28 36092 1612618 2.19 1648710 29 39462 1603209 2.40 1642671 30 34249 1605605 2.09 1639854 31 35722 1610452 2.17 1646174 32 34563 1614006 2.10 1648569 33 32608 1612851 1.98 1645459 34 33770 1610895 2.05 1644665 35 32635 1615788 1.98 1648423 36 30001 1625907 1.81 1655908 37 29981 1626178 1.81 1656159 38 30317 1629416 1.83 1659733 39 30694 1632594 1.85 1663288 40 27743 1636711 1.67 1664454 41 29191 1651578 1.74 1680769 42 26626 1659562 1.58 1686188 43 27372 1648277 1.63 1675649 44 29851 1660121 1.77 1689972 45 24191 1663799 1.43 1687990 46 25677 1671534 1.51 1697211 47 27451 1667584 1.62 1695035 48 23560 1666692 1.39 1690252 49 26308 1671541 1.55 1697849 50 23615 1680296 1.39 1703911 51 23475 1678757 1.38 1702232 52 23584 1682874 1.38 1706458 53 24702 1681468 1.45 1706170 54 23529 1682191 1.38 1705720 55 21818 1694792 1.27 1716610 56 23965 1693404 1.40 1717369 57 22211 1681231 1.30 1703442 58 22075 1683953 1.29 1706028 59 23772 1685533 1.39 1709305 60 19524 1687179 1.14 1706703 61 21757 1681862 1.28 1703619 62 23255 1685841 1.36 1709096 63 20785 1677205 1.22 1697990 64 23143 1680134 1.36 1703277 65 21904 1677853 1.29 1699757 66 22097 1669018 1.31 1691115 67 22731 1667351 1.34 1690082 68 21794 1659247 1.30 1681041 69 22640 1650429 1.35 1673069 70 20910 1645540 1.25 1666450 71 23512 1648197 1.41 1671709 72 20914 1633013 1.26 1653927 73 22050 1624665 1.34 1646715 74 24864 1621609 1.51 1646473 75 21996 1616815 1.34 1638811 76 23746 1609876 1.45 1633622 77 23058 1600281 1.42 1623339 78 21052 1592630 1.30 1613682 79 24218 1584316 1.51 1608534 80 23211 1575653 1.45 1598864 81 22531 1568836 1.42 1591367 82 22978 1560120 1.45 1583098 83 24557 1558731 1.55 1583288 84 25030 1549326 1.59 1574356 85 23201 1541005 1.48 1564206 86 24877 1541438 1.59 1566315 87 23896 1520671 1.55 1544567 88 24120 1510975 1.57 1535095 89 27035 1501407 1.77 1528442 90 23177 1492340 1.53 1515517 91 25390 1476761 1.69 1502151 92 26737 1473066 1.78 1499803 93 25748 1465485 1.73 1491233 94 27669 1456162 1.86 1483831 95 25038 1449272 1.70 1474310 96 25338 1437323 1.73 1462661 97 25478 1423489 1.76 1448967 98 25928 1420998 1.79 1446926 99 26364 1408265 1.84 1434629 100 24630 1400514 1.73 1425144 101 27199 1392539 1.92 1419738 102 25975 1378780 1.85 1404755 103 26910 1371086 1.92 1397996 104 27732 1362675 1.99 1390407 105 25415 1355060 1.84 1380475 106 26880 1346187 1.96 1373067 107 27911 1330586 2.05 1358497 108 25660 1318155 1.91 1343815 109 27556 1306690 2.07 1334246 110 27372 1297571 2.07 1324943 111 27578 1285175 2.10 1312753 112 27350 1279185 2.09 1306535 113 27766 1271015 2.14 1298781 114 27980 1261224 2.17 1289204 115 27190 1250481 2.13 1277671 116 29129 1239450 2.30 1268579 117 27322 1225622 2.18 1252944 118 27219 1216156 2.19 1243375 119 29561 1207033 2.39 1236594 120 27205 1195844 2.22 1223049 121 28600 1184820 2.36 1213420 122 28149 1180302 2.33 1208451 123 27767 1171594 2.32 1199361 124 29226 1159580 2.46 1188806 125 28536 1149975 2.42 1178511 126 27765 1137128 2.38 1164893 127 28311 1128739 2.45 1157050 128 28663 1117705 2.50 1146368 129 28825 1107497 2.54 1136322 130 28069 1097364 2.49 1125433 131 28424 1087688 2.55 1116112 132 27604 1079250 2.49 1106854 133 28293 1069931 2.58 1098224 134 29899 1058423 2.75 1088322 135 27593 1044234 2.57 1071827 136 28294 1038844 2.65 1067138 137 28592 1028180 2.71 1056772 138 27703 1021427 2.64 1049130 139 29173 1008833 2.81 1038006 140 27737 1000789 2.70 1028526 141 27906 990081 2.74 1017987 142 27999 979431 2.78 1007430 143 28398 972315 2.84 1000713 144 28688 963567 2.89 992255 145 28113 954129 2.86 982242 146 29346 947456 3.00 976802 147 28335 937199 2.93 965534 148 29107 932666 3.03 961773 149 30211 920305 3.18 950516 150 29270 912202 3.11 941472 151 31885 780623 3.92 812508 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 52362 146819 26.29 199181 2 54149 252244 17.67 306393 3 50456 247902 16.91 298358 4 40710 206019 16.50 246729 5 22253 265688 7.73 287941 6 17903 162265 9.94 180168 7 18701 156576 10.67 175277 8 18733 156574 10.69 175307 9 19010 153845 11.00 172855 10 19311 150835 11.35 170146 11 19456 153754 11.23 173210 12 19305 155478 11.05 174783 13 18964 151252 11.14 170216 14 18330 149847 10.90 168177 15 18145 152889 10.61 171034 16 17987 149573 10.73 167560 17 17659 149937 10.54 167596 18 17196 150664 10.24 167860 19 16448 148386 9.98 164834 20 16186 152035 9.62 168221 21 16024 149488 9.68 165512 22 16140 150280 9.70 166420 23 15625 150338 9.41 165963 24 14890 148198 9.13 163088 25 14822 145997 9.22 160819 26 14723 147019 9.10 161742 27 14315 147697 8.84 162012 28 14511 149482 8.85 163993 29 14077 147883 8.69 161960 30 14012 145756 8.77 159768 31 13657 144609 8.63 158266 32 13566 144197 8.60 157763 33 12958 144954 8.21 157912 34 12334 141867 8.00 154201 35 12484 142073 8.08 154557 36 12262 143247 7.89 155509 37 12233 140063 8.03 152296 38 11837 140520 7.77 152357 39 11640 141138 7.62 152778 40 11524 137783 7.72 149307 41 11258 137256 7.58 148514 42 10822 135087 7.42 145909 43 10715 134954 7.36 145669 44 10739 136589 7.29 147328 45 10574 132969 7.37 143543 46 10465 131445 7.37 141910 47 10320 131772 7.26 142092 48 10000 130981 7.09 140981 49 10038 129243 7.21 139281 50 10093 127999 7.31 138092 51 9394 128397 6.82 137791 52 9638 128295 6.99 137933 53 9457 124659 7.05 134116 54 9140 124429 6.84 133569 55 9306 124032 6.98 133338 56 9216 122090 7.02 131306 57 9000 120892 6.93 129892 58 8797 119884 6.84 128681 59 9052 119591 7.04 128643 60 9010 119492 7.01 128502 61 8784 116793 6.99 125577 62 8622 116398 6.90 125020 63 8394 115020 6.80 123414 64 8298 113707 6.80 122005 65 8116 111630 6.78 119746 66 8215 110486 6.92 118701 67 8148 110386 6.87 118534 68 8182 110777 6.88 118959 69 7899 107859 6.82 115758 70 8081 107248 7.01 115329 71 7823 106903 6.82 114726 72 8038 104922 7.12 112960 73 7724 103405 6.95 111129 74 7681 102798 6.95 110479 75 7722 102345 7.02 110067 76 7646 101824 6.98 109470 77 7466 99113 7.01 106579 78 7167 98030 6.81 105197 79 7368 96456 7.10 103824 80 7464 95801 7.23 103265 81 7088 95213 6.93 102301 82 7024 93689 6.97 100713 83 6959 92310 7.01 99269 84 7155 92764 7.16 99919 85 6956 90099 7.17 97055 86 6821 89873 7.05 96694 87 6728 89628 6.98 96356 88 6726 88340 7.08 95066 89 6627 86609 7.11 93236 90 6651 85939 7.18 92590 91 6591 84548 7.23 91139 92 6433 84053 7.11 90486 93 6280 81940 7.12 88220 94 6406 80820 7.34 87226 95 6273 80503 7.23 86776 96 6194 79104 7.26 85298 97 5958 78339 7.07 84297 98 6032 76941 7.27 82973 99 6027 75840 7.36 81867 100 5941 75799 7.27 81740 101 5771 74330 7.20 80101 102 5679 73392 7.18 79071 103 5715 73593 7.21 79308 104 5766 72131 7.40 77897 105 5651 71045 7.37 76696 106 5330 69959 7.08 75289 107 5571 69077 7.46 74648 108 5495 68948 7.38 74443 109 5576 67714 7.61 73290 110 5501 66825 7.61 72326 111 5196 66248 7.27 71444 112 5225 64900 7.45 70125 113 5382 64084 7.75 69466 114 5015 63072 7.37 68087 115 5096 63055 7.48 68151 116 5121 62164 7.61 67285 117 5031 61644 7.55 66675 118 4874 60151 7.50 65025 119 4823 60024 7.44 64847 120 4735 58741 7.46 63476 121 4669 58036 7.45 62705 122 4680 57860 7.48 62540 123 4712 56987 7.64 61699 124 4689 56739 7.63 61428 125 4594 55819 7.60 60413 126 4467 54882 7.53 59349 127 4537 55101 7.61 59638 128 4422 53736 7.60 58158 129 4430 52979 7.72 57409 130 4383 51817 7.80 56200 131 4358 51527 7.80 55885 132 4266 51231 7.69 55497 133 4217 50489 7.71 54706 134 4183 50184 7.69 54367 135 4166 49448 7.77 53614 136 4016 48260 7.68 52276 137 4035 47761 7.79 51796 138 3982 47425 7.75 51407 139 4017 46537 7.95 50554 140 3882 46633 7.68 50515 141 3788 44738 7.81 48526 142 3857 43704 8.11 47561 143 3776 43359 8.01 47135 144 3756 43246 7.99 47002 145 3548 42046 7.78 45594 146 3600 41929 7.91 45529 147 3464 41504 7.70 44968 148 3499 40814 7.90 44313 149 3380 38973 7.98 42353 150 2922 36048 7.50 38970 151 2021 26539 7.08 28560 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 68280 455599 13.03 523879 2 50251 136605 26.89 186856 3 35547 184716 16.14 220263 4 30454 191135 13.74 221589 5 13622 260722 4.97 274344 6 12959 316648 3.93 329607 7 12275 185746 6.20 198021 8 11935 184318 6.08 196253 9 11741 185531 5.95 197272 10 11748 178086 6.19 189834 11 11835 177799 6.24 189634 12 10559 181880 5.49 192439 13 10001 184321 5.15 194322 14 9603 178624 5.10 188227 15 9106 181302 4.78 190408 16 8692 180484 4.59 189176 17 8101 178478 4.34 186579 18 7555 182610 3.97 190165 19 7470 179856 3.99 187326 20 7476 177262 4.05 184738 21 6952 175597 3.81 182549 22 6491 176919 3.54 183410 23 6060 175652 3.33 181712 24 5740 177050 3.14 182790 25 5602 177879 3.05 183481 26 5160 176051 2.85 181211 27 5016 175314 2.78 180330 28 4886 173984 2.73 178870 29 5024 171858 2.84 176882 30 4274 170773 2.44 175047 31 4191 172256 2.38 176447 32 4000 169832 2.30 173832 33 3755 171003 2.15 174758 34 3632 169082 2.10 172714 35 3484 167552 2.04 171036 36 3302 167819 1.93 171121 37 3196 166046 1.89 169242 38 3410 165258 2.02 168668 39 2876 164855 1.71 167731 40 2650 163308 1.60 165958 41 2530 161552 1.54 164082 42 2272 162797 1.38 165069 43 2365 158694 1.47 161059 44 2252 158357 1.40 160609 45 2118 158346 1.32 160464 46 2085 156068 1.32 158153 47 2186 155567 1.39 157753 48 1819 155116 1.16 156935 49 1756 153393 1.13 155149 50 1724 151350 1.13 153074 51 1680 149517 1.11 151197 52 1642 150641 1.08 152283 53 1527 148426 1.02 149953 54 1468 145853 1.00 147321 55 1471 145706 1.00 147177 56 1708 144898 1.17 146606 57 1306 143888 0.90 145194 58 1405 142879 0.97 144284 59 1386 140193 0.98 141579 60 1248 140198 0.88 141446 61 1162 138482 0.83 139644 62 1267 136459 0.92 137726 63 1187 135440 0.87 136627 64 1265 134654 0.93 135919 65 1447 133952 1.07 135399 66 1104 132121 0.83 133225 67 1102 130601 0.84 131703 68 1089 130107 0.83 131196 69 1175 128619 0.91 129794 70 1067 126382 0.84 127449 71 1165 125392 0.92 126557 72 1145 123244 0.92 124389 73 1182 123049 0.95 124231 74 1423 121924 1.15 123347 75 1026 119055 0.85 120081 76 1051 118143 0.88 119194 77 982 117625 0.83 118607 78 966 114881 0.83 115847 79 1025 114407 0.89 115432 80 1001 112555 0.88 113556 81 1035 112105 0.91 113140 82 1081 111512 0.96 112593 83 1308 109392 1.18 110700 84 1032 108427 0.94 109459 85 942 106855 0.87 107797 86 972 105985 0.91 106957 87 987 105206 0.93 106193 88 1012 103308 0.97 104320 89 1001 101303 0.98 102304 90 885 100561 0.87 101446 91 941 99196 0.94 100137 92 1248 98262 1.25 99510 93 948 96673 0.97 97621 94 885 96171 0.91 97056 95 880 94866 0.92 95746 96 870 93850 0.92 94720 97 835 92682 0.89 93517 98 884 91737 0.95 92621 99 836 89709 0.92 90545 100 905 88721 1.01 89626 101 1080 87440 1.22 88520 102 818 87639 0.92 88457 103 780 86432 0.89 87212 104 831 85294 0.96 86125 105 796 84767 0.93 85563 106 828 83704 0.98 84532 107 765 82529 0.92 83294 108 766 81258 0.93 82024 109 832 79890 1.03 80722 110 955 78253 1.21 79208 111 755 78110 0.96 78865 112 799 77494 1.02 78293 113 717 76404 0.93 77121 114 744 76022 0.97 76766 115 788 73992 1.05 74780 116 734 73210 0.99 73944 117 725 72805 0.99 73530 118 842 71321 1.17 72163 119 864 70029 1.22 70893 120 692 69452 0.99 70144 121 714 69523 1.02 70237 122 751 68663 1.08 69414 123 713 67870 1.04 68583 124 731 65801 1.10 66532 125 687 65726 1.03 66413 126 723 64548 1.11 65271 127 691 64210 1.06 64901 128 831 62168 1.32 62999 129 712 61598 1.14 62310 130 734 61417 1.18 62151 131 678 60577 1.11 61255 132 632 60112 1.04 60744 133 655 59062 1.10 59717 134 678 58288 1.15 58966 135 627 57470 1.08 58097 136 686 56571 1.20 57257 137 771 56283 1.35 57054 138 623 54958 1.12 55581 139 635 54479 1.15 55114 140 645 53614 1.19 54259 141 643 52968 1.20 53611 142 627 52240 1.19 52867 143 574 51947 1.09 52521 144 612 50950 1.19 51562 145 598 50463 1.17 51061 146 612 49992 1.21 50604 147 555 48636 1.13 49191 148 554 47749 1.15 48303 149 477 45214 1.04 45691 150 397 43676 0.90 44073 151 249 31560 0.78 31809 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 223452 397128 36.01 620580 2 231849 566199 29.05 798048 3 177295 478858 27.02 656153 4 158774 480422 24.84 639196 5 71217 609538 10.46 680755 6 65539 695393 8.61 760932 7 66336 784480 7.80 850816 8 65792 764072 7.93 829864 9 61991 739329 7.74 801320 10 60421 732399 7.62 792820 11 59393 722684 7.59 782077 12 54109 716726 7.02 770835 13 52063 716714 6.77 768777 14 50390 719712 6.54 770102 15 45634 716177 5.99 761811 16 43317 712633 5.73 755950 17 42993 706016 5.74 749009 18 37847 703595 5.10 741442 19 38206 702122 5.16 740328 20 36248 694628 4.96 730876 21 34307 683053 4.78 717360 22 33353 678674 4.68 712027 23 31732 674991 4.49 706723 24 29290 667379 4.20 696669 25 27597 664822 3.99 692419 26 28262 660110 4.11 688372 27 24883 648912 3.69 673795 28 23673 647102 3.53 670775 29 24982 638009 3.77 662991 30 21220 632867 3.24 654087 31 21641 626794 3.34 648435 32 21177 621914 3.29 643091 33 18919 614792 2.99 633711 34 19180 611207 3.04 630387 35 19166 606117 3.07 625283 36 16583 602231 2.68 618814 37 16486 597157 2.69 613643 38 16589 593310 2.72 609899 39 15366 588018 2.55 603384 40 14769 583394 2.47 598163 41 14468 580818 2.43 595286 42 12498 578531 2.11 591029 43 12700 570068 2.18 582768 44 14557 565797 2.51 580354 45 10661 564199 1.85 574860 46 11270 559858 1.97 571128 47 12177 555202 2.15 567379 48 9727 549246 1.74 558973 49 11235 546419 2.01 557654 50 10218 541946 1.85 552164 51 8850 536712 1.62 545562 52 8951 534433 1.65 543384 53 10109 530961 1.87 541070 54 8354 526287 1.56 534641 55 7634 524684 1.43 532318 56 8791 519678 1.66 528469 57 7336 512366 1.41 519702 58 7797 508452 1.51 516249 59 8501 504221 1.66 512722 60 6291 500321 1.24 506612 61 6728 495204 1.34 501932 62 7925 490080 1.59 498005 63 6082 484261 1.24 490343 64 6759 482519 1.38 489278 65 6880 477449 1.42 484329 66 5775 473393 1.21 479168 67 6927 468901 1.46 475828 68 6360 462819 1.36 469179 69 5977 457174 1.29 463151 70 5617 452583 1.23 458200 71 6956 450943 1.52 457899 72 5483 442822 1.22 448305 73 5891 436724 1.33 442615 74 7029 434248 1.59 441277 75 5260 428957 1.21 434217 76 6219 423374 1.45 429593 77 5960 418238 1.41 424198 78 4739 412955 1.13 417694 79 5789 408648 1.40 414437 80 6263 403703 1.53 409966 81 4950 401009 1.22 405959 82 5283 395244 1.32 400527 83 6175 393364 1.55 399539 84 5233 390397 1.32 395630 85 5262 384987 1.35 390249 86 5714 382735 1.47 388449 87 4720 374408 1.24 379128 88 4728 369075 1.26 373803 89 6326 366780 1.70 373106 90 4544 362442 1.24 366986 91 4759 358629 1.31 363388 92 5400 354193 1.50 359593 93 4558 350801 1.28 355359 94 5579 347284 1.58 352863 95 4929 344108 1.41 349037 96 4265 340490 1.24 344755 97 4594 335299 1.35 339893 98 5327 332783 1.58 338110 99 4741 328797 1.42 333538 100 4319 326355 1.31 330674 101 5043 322565 1.54 327608 102 4158 317818 1.29 321976 103 4978 316098 1.55 321076 104 4935 312165 1.56 317100 105 3852 310176 1.23 314028 106 4295 305923 1.38 310218 107 5108 300403 1.67 305511 108 3777 297059 1.26 300836 109 4593 293525 1.54 298118 110 4729 290041 1.60 294770 111 4022 287465 1.38 291487 112 4487 284333 1.55 288820 113 4564 282188 1.59 286752 114 4046 279895 1.42 283941 115 3988 275844 1.43 279832 116 4871 271704 1.76 276575 117 3837 268117 1.41 271954 118 3912 265103 1.45 269015 119 4692 263088 1.75 267780 120 3709 258406 1.42 262115 121 4261 255174 1.64 259435 122 4077 253557 1.58 257634 123 3707 252760 1.45 256467 124 4001 248941 1.58 252942 125 4207 243792 1.70 247999 126 3631 241207 1.48 244838 127 3786 238906 1.56 242692 128 4106 235827 1.71 239933 129 3727 232743 1.58 236470 130 3866 229566 1.66 233432 131 3842 226771 1.67 230613 132 3395 225392 1.48 228787 133 3631 222097 1.61 225728 134 4262 218116 1.92 222378 135 3180 215682 1.45 218862 136 3459 214278 1.59 217737 137 3952 210313 1.84 214265 138 3233 208598 1.53 211831 139 3829 205656 1.83 209485 140 3487 204031 1.68 207518 141 3074 200616 1.51 203690 142 3311 197728 1.65 201039 143 3754 196243 1.88 199997 144 3147 194231 1.59 197378 145 3010 190611 1.55 193621 146 3389 186891 1.78 190280 147 2893 183967 1.55 186860 148 3052 181215 1.66 184267 149 2936 174541 1.65 177477 150 1980 164856 1.19 166836 151 1485 119612 1.23 121097