Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content POR-71-TP2_R1 POR-71-TP2_R1.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 223448023.0 22.4 Gbp 0.0 15-141 23.0 77.51076971490407 100.561991224241 102 pass pass warn pass pass warn pass warn pass pass pass POR-71-TP2_R2 POR-71-TP2_R2.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 223448023.0 23.1 Gbp 0.0 15-141 24.0 78.31802307571779 103.49984507135245 107 pass pass fail pass pass warn pass warn pass warn pass POR-73-TP2_R1 POR-73-TP2_R1.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 100464571.0 12.2 Gbp 0.0 15-141 22.0 28.76592542990606 122.17477187057315 141 pass pass warn pass pass pass pass warn fail pass pass POR-73-TP2_R2 POR-73-TP2_R2.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 100464571.0 12.3 Gbp 0.0 15-141 22.0 32.93103410092317 122.62972143682373 141 pass pass fail pass warn fail pass warn fail warn pass POR-76-TP2_R1 POR-76-TP2_R1.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 156151771.0 14.8 Gbp 0.0 15-141 23.0 72.97114589666651 95.39411287880942 92 pass pass warn pass pass warn pass warn pass pass pass POR-76-TP2_R2 POR-76-TP2_R2.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 156151771.0 15.5 Gbp 0.0 15-141 24.0 72.75945605667764 99.26432063328951 97 pass pass fail pass pass fail pass warn pass warn warn POR-79-TP2_R1 POR-79-TP2_R1.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 252288231.0 26.2 Gbp 0.0 15-141 23.0 73.89436344840638 103.98872979136311 107 pass pass warn pass pass warn pass warn pass pass pass POR-79-TP2_R2 POR-79-TP2_R2.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 252288231.0 26.8 Gbp 0.0 15-141 23.0 74.96912840566398 106.4675389118726 112 pass pass fail pass pass warn pass warn pass warn pass POR-82-TP2_R1 POR-82-TP2_R1.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 224200417.0 21.7 Gbp 0.0 15-141 23.0 66.89821735920816 97.03266130856483 97 pass pass warn pass pass fail pass warn warn warn pass POR-82-TP2_R2 POR-82-TP2_R2.fastp-trim.fq.gz Conventional base calls Sanger / Illumina 1.9 224200417.0 22.9 Gbp 0.0 15-141 24.0 68.60701165760874 102.20389515154203 102 pass pass fail pass pass fail pass warn warn warn warn