CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 443637 1327477 25.05 1771114 2 477734 2383627 16.70 2861361 3 411533 2632869 13.52 3044402 4 352510 1916090 15.54 2268600 5 208914 2664049 7.27 2872963 6 175292 1704448 9.33 1879740 7 167017 1601519 9.44 1768536 8 179379 1719437 9.45 1898816 9 181736 1672977 9.80 1854713 10 188044 1674735 10.09 1862779 11 198265 1737199 10.24 1935464 12 203378 1733328 10.50 1936706 13 196675 1721864 10.25 1918539 14 200467 1803512 10.00 2003979 15 202099 1812104 10.03 2014203 16 204735 1761123 10.41 1965858 17 201928 1763511 10.27 1965439 18 201072 1867506 9.72 2068578 19 199319 1838652 9.78 2037971 20 202157 1837874 9.91 2040031 21 201266 1852046 9.80 2053312 22 200648 1836306 9.85 2036954 23 204348 1879888 9.80 2084236 24 201339 1889174 9.63 2090513 25 202961 1899775 9.65 2102736 26 204735 1967106 9.43 2171841 27 201548 1919621 9.50 2121169 28 204901 1914934 9.67 2119835 29 205928 1947509 9.56 2153437 30 205010 1958880 9.47 2163890 31 203196 1938847 9.49 2142043 32 206615 1977329 9.46 2183944 33 205934 2021873 9.24 2227807 34 204410 2019755 9.19 2224165 35 203481 1962097 9.40 2165578 36 203685 1980341 9.33 2184026 37 204287 1962883 9.43 2167170 38 202756 1978789 9.29 2181545 39 205780 1991372 9.37 2197152 40 202383 1963409 9.34 2165792 41 202625 1958316 9.38 2160941 42 199427 1969647 9.19 2169074 43 200714 1968101 9.25 2168815 44 199702 1973032 9.19 2172734 45 198434 1970392 9.15 2168826 46 199890 1967972 9.22 2167862 47 200050 1993111 9.12 2193161 48 199305 2004143 9.05 2203448 49 197732 1964280 9.15 2162012 50 198968 1975975 9.15 2174943 51 199158 1967184 9.19 2166342 52 199803 1959065 9.25 2158868 53 198685 1953773 9.23 2152458 54 197077 1953240 9.17 2150317 55 194176 1946746 9.07 2140922 56 198137 1945107 9.24 2143244 57 196999 1978889 9.05 2175888 58 194644 1952079 9.07 2146723 59 196480 1940942 9.19 2137422 60 194316 1932140 9.14 2126456 61 194823 1922977 9.20 2117800 62 193742 1897891 9.26 2091633 63 191167 1912522 9.09 2103689 64 190169 1891462 9.14 2081631 65 189110 1862145 9.22 2051255 66 187964 1847489 9.23 2035453 67 187229 1834923 9.26 2022152 68 185543 1842375 9.15 2027918 69 185527 1838469 9.17 2023996 70 183204 1832513 9.09 2015717 71 182682 1816788 9.14 1999470 72 181763 1826508 9.05 2008271 73 180098 1778235 9.20 1958333 74 181473 1762452 9.34 1943925 75 177191 1763987 9.13 1941178 76 177829 1743137 9.26 1920966 77 176294 1731590 9.24 1907884 78 173982 1709524 9.24 1883506 79 171813 1694579 9.21 1866392 80 170622 1669510 9.27 1840132 81 170286 1656504 9.32 1826790 82 168730 1646264 9.30 1814994 83 165964 1619689 9.29 1785653 84 164779 1621245 9.23 1786024 85 163610 1584075 9.36 1747685 86 161002 1568647 9.31 1729649 87 160385 1534965 9.46 1695350 88 159403 1522093 9.48 1681496 89 157611 1509146 9.46 1666757 90 155954 1497642 9.43 1653596 91 155061 1482388 9.47 1637449 92 152897 1450943 9.53 1603840 93 151270 1445948 9.47 1597218 94 150191 1424030 9.54 1574221 95 147944 1407711 9.51 1555655 96 146151 1394837 9.48 1540988 97 143397 1380339 9.41 1523736 98 141084 1345389 9.49 1486473 99 140639 1343221 9.48 1483860 100 137906 1315033 9.49 1452939 101 137336 1293159 9.60 1430495 102 134905 1283974 9.51 1418879 103 132865 1264459 9.51 1397324 104 131494 1253244 9.50 1384738 105 128575 1218481 9.54 1347056 106 126845 1199358 9.56 1326203 107 125829 1174514 9.68 1300343 108 123456 1167100 9.57 1290556 109 123108 1169406 9.52 1292514 110 120808 1145651 9.54 1266459 111 120310 1124683 9.66 1244993 112 118387 1098128 9.73 1216515 113 117075 1101568 9.61 1218643 114 114787 1111864 9.36 1226651 115 112864 1045808 9.74 1158672 116 112638 1034085 9.82 1146723 117 108901 1012303 9.71 1121204 118 107997 994875 9.79 1102872 119 108397 981186 9.95 1089583 120 106108 992838 9.66 1098946 121 104682 955409 9.87 1060091 122 101978 945237 9.74 1047215 123 102471 975489 9.51 1077960 124 99985 894334 10.06 994319 125 96973 883031 9.90 980004 126 96510 868838 10.00 965348 127 93840 853113 9.91 946953 128 93348 849201 9.90 942549 129 91629 837571 9.86 929200 130 89443 805372 10.00 894815 131 87902 795542 9.95 883444 132 86560 780773 9.98 867333 133 85609 769481 10.01 855090 134 83904 755238 10.00 839142 135 82185 739111 10.01 821296 136 81006 727910 10.01 808916 137 80081 722606 9.98 802687 138 79207 712142 10.01 791349 139 77666 696631 10.03 774297 140 76662 681169 10.12 757831 141 74797 674900 9.98 749697 142 73382 657867 10.04 731249 143 71881 636174 10.15 708055 144 70914 624623 10.20 695537 145 69701 613735 10.20 683436 146 68921 607218 10.19 676139 147 68182 603793 10.15 671975 148 68325 596343 10.28 664668 149 69595 586325 10.61 655920 150 65136 577737 10.13 642873 151 57677 536782 9.70 594459 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 509211 4280712 10.63 4789923 2 311580 1406391 18.14 1717971 3 195699 2157084 8.32 2352783 4 179207 1855796 8.81 2035003 5 64901 2491187 2.54 2556088 6 61192 3165119 1.90 3226311 7 58852 2007405 2.85 2066257 8 61141 2013537 2.95 2074678 9 53046 1980075 2.61 2033121 10 63123 2018508 3.03 2081631 11 57014 2016009 2.75 2073023 12 48752 2107942 2.26 2156694 13 44850 2098864 2.09 2143714 14 55479 2105085 2.57 2160564 15 43737 2152782 1.99 2196519 16 51213 2147810 2.33 2199023 17 39430 2164091 1.79 2203521 18 34813 2167805 1.58 2202618 19 33666 2200477 1.51 2234143 20 35734 2159755 1.63 2195489 21 32793 2168922 1.49 2201715 22 32889 2213894 1.46 2246783 23 30294 2212689 1.35 2242983 24 30225 2330797 1.28 2361022 25 30029 2231936 1.33 2261965 26 27651 2220090 1.23 2247741 27 26926 2240385 1.19 2267311 28 26661 2234900 1.18 2261561 29 25471 2241278 1.12 2266749 30 24786 2244520 1.09 2269306 31 24166 2255611 1.06 2279777 32 25344 2247250 1.12 2272594 33 24019 2273033 1.05 2297052 34 23060 2266821 1.01 2289881 35 22129 2269236 0.97 2291365 36 21372 2292928 0.92 2314300 37 21873 2301782 0.94 2323655 38 20312 2287588 0.88 2307900 39 20646 2311689 0.89 2332335 40 19639 2304314 0.85 2323953 41 18946 2299832 0.82 2318778 42 18138 2300193 0.78 2318331 43 18061 2291334 0.78 2309395 44 18258 2300461 0.79 2318719 45 17762 2319879 0.76 2337641 46 17246 2317671 0.74 2334917 47 17366 2299323 0.75 2316689 48 16939 2310984 0.73 2327923 49 16738 2303277 0.72 2320015 50 16569 2323464 0.71 2340033 51 16560 2309908 0.71 2326468 52 16364 2309995 0.70 2326359 53 16410 2280654 0.71 2297064 54 15875 2287308 0.69 2303183 55 15898 2292907 0.69 2308805 56 15774 2274549 0.69 2290323 57 15975 2297121 0.69 2313096 58 16097 2267365 0.70 2283462 59 15901 2260537 0.70 2276438 60 16078 2273081 0.70 2289159 61 16330 2252339 0.72 2268669 62 16411 2225409 0.73 2241820 63 16520 2206428 0.74 2222948 64 16471 2207497 0.74 2223968 65 17111 2201744 0.77 2218855 66 16695 2193565 0.76 2210260 67 17123 2167841 0.78 2184964 68 17238 2159009 0.79 2176247 69 17465 2158629 0.80 2176094 70 17466 2140689 0.81 2158155 71 17862 2120885 0.84 2138747 72 17815 2096886 0.84 2114701 73 18254 2082313 0.87 2100567 74 18188 2057867 0.88 2076055 75 18556 2060573 0.89 2079129 76 18826 2066019 0.90 2084845 77 18830 2018286 0.92 2037116 78 18835 1995391 0.94 2014226 79 19069 1963746 0.96 1982815 80 19440 1955400 0.98 1974840 81 19607 1925705 1.01 1945312 82 19605 1906668 1.02 1926273 83 19833 1889609 1.04 1909442 84 20357 1880848 1.07 1901205 85 20237 1859102 1.08 1879339 86 20201 1836780 1.09 1856981 87 20096 1835075 1.08 1855171 88 20560 1784076 1.14 1804636 89 20844 1767490 1.17 1788334 90 20830 1748166 1.18 1768996 91 20931 1730476 1.20 1751407 92 21135 1708975 1.22 1730110 93 21581 1709860 1.25 1731441 94 21126 1658940 1.26 1680066 95 21413 1623621 1.30 1645034 96 21158 1607164 1.30 1628322 97 20888 1585472 1.30 1606360 98 21238 1562829 1.34 1584067 99 21119 1543109 1.35 1564228 100 20967 1521073 1.36 1542040 101 21263 1505755 1.39 1527018 102 21740 1496382 1.43 1518122 103 21190 1461234 1.43 1482424 104 21235 1445371 1.45 1466606 105 21286 1424068 1.47 1445354 106 21230 1397845 1.50 1419075 107 20919 1378313 1.50 1399232 108 21556 1353798 1.57 1375354 109 21063 1333939 1.55 1355002 110 21086 1316298 1.58 1337384 111 20987 1291319 1.60 1312306 112 20997 1276893 1.62 1297890 113 20744 1250171 1.63 1270915 114 21082 1236093 1.68 1257175 115 21130 1219077 1.70 1240207 116 20725 1195849 1.70 1216574 117 20575 1173433 1.72 1194008 118 20504 1157309 1.74 1177813 119 20805 1148571 1.78 1169376 120 20557 1129992 1.79 1150549 121 20352 1108959 1.80 1129311 122 20234 1083160 1.83 1103394 123 20077 1069925 1.84 1090002 124 20153 1052046 1.88 1072199 125 19873 1028194 1.90 1048067 126 19821 1013219 1.92 1033040 127 19699 990194 1.95 1009893 128 19739 972435 1.99 992174 129 19089 952842 1.96 971931 130 19153 940059 2.00 959212 131 18999 919745 2.02 938744 132 19053 905687 2.06 924740 133 18831 892551 2.07 911382 134 18567 874371 2.08 892938 135 18500 863001 2.10 881501 136 18559 848567 2.14 867126 137 18151 822708 2.16 840859 138 17864 808697 2.16 826561 139 18650 799855 2.28 818505 140 17824 782424 2.23 800248 141 17771 771426 2.25 789197 142 18906 772575 2.39 791481 143 17059 733279 2.27 750338 144 16894 723507 2.28 740401 145 17141 711380 2.35 728521 146 16896 704167 2.34 721063 147 17395 696617 2.44 714012 148 17462 687492 2.48 704954 149 18048 673565 2.61 691613 150 20795 675099 2.99 695894 151 27310 617963 4.23 645273 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1697567 4624017 26.85 6321584 2 1566320 5968747 20.79 7535067 3 1112751 5776870 16.15 6889621 4 1071209 5436308 16.46 6507517 5 422913 6559798 6.06 6982711 6 390507 7200712 5.14 7591219 7 374275 8177816 4.38 8552091 8 341730 7980876 4.11 8322606 9 328279 7767165 4.06 8095444 10 300877 7717045 3.75 8017922 11 302237 7662706 3.79 7964943 12 269574 7699167 3.38 7968741 13 267330 7619299 3.39 7886629 14 253007 7552462 3.24 7805469 15 243397 7556135 3.12 7799532 16 255728 7523987 3.29 7779715 17 223272 7426165 2.92 7649437 18 203822 7467183 2.66 7671005 19 196536 7422645 2.58 7619181 20 208377 7424620 2.73 7632997 21 190703 7538773 2.47 7729476 22 192721 7470265 2.51 7662986 23 177088 7466459 2.32 7643547 24 171445 7453649 2.25 7625094 25 172685 7460089 2.26 7632774 26 162224 7467671 2.13 7629895 27 157494 7453698 2.07 7611192 28 154807 7514065 2.02 7668872 29 149363 7617882 1.92 7767245 30 145660 7575933 1.89 7721593 31 142070 7634255 1.83 7776325 32 144338 7629268 1.86 7773606 33 140266 7625422 1.81 7765688 34 132085 7649714 1.70 7781799 35 129756 7685601 1.66 7815357 36 122901 7831268 1.55 7954169 37 126315 7783677 1.60 7909992 38 119352 7772996 1.51 7892348 39 119424 7789461 1.51 7908885 40 112424 7833705 1.41 7946129 41 110475 7878982 1.38 7989457 42 105468 7940016 1.31 8045484 43 104823 7967525 1.30 8072348 44 101863 7991379 1.26 8093242 45 98837 7889291 1.24 7988128 46 97276 7947215 1.21 8044491 47 94346 7946109 1.17 8040455 48 91279 7943307 1.14 8034586 49 90788 8023745 1.12 8114533 50 88424 7937985 1.10 8026409 51 88515 7937059 1.10 8025574 52 86768 7903733 1.09 7990501 53 86986 7929827 1.09 8016813 54 81565 7889626 1.02 7971191 55 81306 7869023 1.02 7950329 56 79647 7868772 1.00 7948419 57 78793 7836362 1.00 7915155 58 79338 7834838 1.00 7914176 59 78816 7820151 1.00 7898967 60 77860 7829680 0.98 7907540 61 78492 7821347 0.99 7899839 62 79605 7809821 1.01 7889426 63 78690 7644647 1.02 7723337 64 77730 7628060 1.01 7705790 65 78073 7584471 1.02 7662544 66 78146 7590939 1.02 7669085 67 79537 7566065 1.04 7645602 68 80316 7490015 1.06 7570331 69 81576 7493170 1.08 7574746 70 80805 7374771 1.08 7455576 71 82258 7368270 1.10 7450528 72 82556 7314511 1.12 7397067 73 84500 7164962 1.17 7249462 74 83948 7100587 1.17 7184535 75 83657 7053839 1.17 7137496 76 84131 6978960 1.19 7063091 77 86053 6921833 1.23 7007886 78 86276 6855908 1.24 6942184 79 88341 6856507 1.27 6944848 80 87645 6726558 1.29 6814203 81 88763 6675719 1.31 6764482 82 89705 6641091 1.33 6730796 83 90727 6572854 1.36 6663581 84 90616 6502641 1.37 6593257 85 91503 6397801 1.41 6489304 86 92685 6339100 1.44 6431785 87 93225 6232174 1.47 6325399 88 93887 6156480 1.50 6250367 89 94212 6105961 1.52 6200173 90 96580 6080480 1.56 6177060 91 96936 5993344 1.59 6090280 92 97537 5904249 1.63 6001786 93 97724 5852872 1.64 5950596 94 97472 5754470 1.67 5851942 95 97773 5672395 1.69 5770168 96 97307 5592212 1.71 5689519 97 96956 5495391 1.73 5592347 98 96841 5416369 1.76 5513210 99 97447 5378734 1.78 5476181 100 97460 5290940 1.81 5388400 101 97369 5222834 1.83 5320203 102 97153 5139495 1.86 5236648 103 97202 5036825 1.89 5134027 104 97133 4983953 1.91 5081086 105 97101 4931669 1.93 5028770 106 97561 4882535 1.96 4980096 107 97997 4813074 2.00 4911071 108 97157 4740296 2.01 4837453 109 97082 4630579 2.05 4727661 110 96828 4558612 2.08 4655440 111 97806 4561440 2.10 4659246 112 96766 4429561 2.14 4526327 113 96483 4343928 2.17 4440411 114 95078 4267461 2.18 4362539 115 95142 4209584 2.21 4304726 116 94703 4125238 2.24 4219941 117 95468 4054930 2.30 4150398 118 93961 3993404 2.30 4087365 119 94880 3938932 2.35 4033812 120 93996 3859667 2.38 3953663 121 92408 3790668 2.38 3883076 122 91906 3733105 2.40 3825011 123 91075 3673064 2.42 3764139 124 90821 3610250 2.45 3701071 125 90906 3594233 2.47 3685139 126 89924 3473779 2.52 3563703 127 88828 3426583 2.53 3515411 128 88837 3372973 2.57 3461810 129 88081 3320299 2.58 3408380 130 87856 3295413 2.60 3383269 131 87011 3213457 2.64 3300468 132 86056 3147879 2.66 3233935 133 86530 3089008 2.72 3175538 134 84985 3028955 2.73 3113940 135 84557 2974183 2.76 3058740 136 83892 2930919 2.78 3014811 137 84187 2896278 2.82 2980465 138 82720 2835149 2.83 2917869 139 82731 2800180 2.87 2882911 140 83278 2746759 2.94 2830037 141 81139 2674623 2.94 2755762 142 81170 2648621 2.97 2729791 143 79872 2587294 2.99 2667166 144 79753 2528102 3.06 2607855 145 79412 2491343 3.09 2570755 146 78228 2454306 3.09 2532534 147 80136 2439089 3.18 2519225 148 80736 2375650 3.29 2456386 149 82747 2342625 3.41 2425372 150 86120 2336166 3.56 2422286 151 105495 2139589 4.70 2245084 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 112329 359985 23.78 472314 2 118858 704969 14.43 823827 3 108425 724558 13.02 832983 4 91416 523044 14.88 614460 5 55228 818929 6.32 874157 6 42261 432215 8.91 474476 7 41556 404343 9.32 445899 8 45146 405876 10.01 451022 9 44246 388965 10.21 433211 10 46081 379546 10.83 425627 11 48339 405239 10.66 453578 12 48070 384443 11.11 432513 13 46007 368599 11.10 414606 14 45611 387786 10.52 433397 15 45243 372407 10.83 417650 16 44476 358084 11.05 402560 17 43141 352194 10.91 395335 18 42708 353557 10.78 396265 19 41723 350769 10.63 392492 20 41057 344702 10.64 385759 21 40348 342482 10.54 382830 22 39277 324936 10.78 364213 23 39513 328541 10.74 368054 24 37927 322279 10.53 360206 25 37354 319712 10.46 357066 26 36824 326833 10.13 363657 27 35850 307345 10.45 343195 28 35366 301465 10.50 336831 29 34751 304708 10.24 339459 30 33566 299557 10.08 333123 31 33446 287921 10.41 321367 32 32629 288067 10.17 320696 33 32572 299312 9.81 331884 34 32065 318075 9.16 350140 35 30675 273006 10.10 303681 36 29578 269265 9.90 298843 37 29692 259295 10.27 288987 38 28271 259054 9.84 287325 39 28369 256397 9.96 284766 40 27155 246281 9.93 273436 41 26536 240422 9.94 266958 42 25559 240316 9.61 265875 43 25248 239134 9.55 264382 44 24801 232923 9.62 257724 45 24005 225763 9.61 249768 46 23913 222349 9.71 246262 47 23396 225316 9.41 248712 48 22745 225454 9.16 248199 49 22130 210629 9.51 232759 50 22040 207670 9.59 229710 51 21408 204159 9.49 225567 52 21291 200977 9.58 222268 53 20832 197112 9.56 217944 54 20457 195068 9.49 215525 55 19800 189751 9.45 209551 56 19799 187289 9.56 207088 57 19355 186802 9.39 206157 58 18846 183585 9.31 202431 59 18594 180443 9.34 199037 60 18210 177841 9.29 196051 61 18200 175700 9.39 193900 62 18212 170974 9.63 189186 63 17377 172177 9.17 189554 64 17034 167083 9.25 184117 65 16701 159082 9.50 175783 66 16205 154755 9.48 170960 67 15863 152254 9.44 168117 68 15433 151116 9.27 166549 69 15590 149757 9.43 165347 70 15016 148890 9.16 163906 71 15145 145525 9.43 160670 72 14610 146363 9.08 160973 73 14494 139813 9.39 154307 74 14452 136759 9.56 151211 75 13978 137809 9.21 151787 76 13732 132694 9.38 146426 77 13638 129487 9.53 143125 78 13197 125548 9.51 138745 79 12922 124702 9.39 137624 80 12939 124586 9.41 137525 81 12521 119645 9.47 132166 82 12286 119077 9.35 131363 83 11960 117385 9.25 129345 84 11818 116794 9.19 128612 85 11461 110678 9.38 122139 86 11584 108267 9.67 119851 87 11263 104314 9.75 115577 88 11176 103404 9.75 114580 89 11016 101733 9.77 112749 90 10503 101822 9.35 112325 91 10676 105693 9.17 116369 92 10186 96549 9.54 106735 93 10022 96072 9.45 106094 94 9894 94024 9.52 103918 95 9693 92306 9.50 101999 96 9694 91904 9.54 101598 97 9290 90841 9.28 100131 98 9004 86735 9.40 95739 99 8948 88155 9.21 97103 100 8802 85108 9.37 93910 101 8502 81989 9.40 90491 102 8364 81503 9.31 89867 103 8304 80667 9.33 88971 104 8061 81373 9.01 89434 105 7795 76414 9.26 84209 106 7647 75211 9.23 82858 107 7525 72470 9.41 79995 108 7643 73821 9.38 81464 109 7642 81809 8.54 89451 110 7454 73417 9.22 80871 111 7165 70837 9.19 78002 112 7471 68340 9.85 75811 113 7256 73485 8.99 80741 114 7126 90061 7.33 97187 115 6612 63621 9.41 70233 116 6578 63217 9.42 69795 117 6483 59814 9.78 66297 118 6402 60618 9.55 67020 119 6551 59483 9.92 66034 120 6500 66675 8.88 73175 121 6268 57571 9.82 63839 122 5899 60709 8.86 66608 123 6271 79336 7.33 85607 124 5835 53162 9.89 58997 125 5793 51546 10.10 57339 126 5506 50619 9.81 56125 127 5346 50179 9.63 55525 128 5386 50541 9.63 55927 129 5279 52224 9.18 57503 130 5170 46156 10.07 51326 131 5080 45883 9.97 50963 132 4858 45582 9.63 50440 133 4900 43827 10.06 48727 134 4663 44564 9.47 49227 135 4709 42258 10.03 46967 136 4252 41932 9.21 46184 137 4545 42602 9.64 47147 138 4502 41850 9.71 46352 139 4288 41029 9.46 45317 140 4247 39384 9.73 43631 141 4136 40163 9.34 44299 142 4047 39405 9.31 43452 143 3845 36567 9.51 40412 144 3842 35466 9.77 39308 145 3804 34824 9.85 38628 146 3754 34452 9.83 38206 147 3686 34598 9.63 38284 148 3546 34273 9.38 37819 149 3500 33057 9.57 36557 150 3291 31678 9.41 34969 151 2393 27206 8.08 29599 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 150371 1393461 9.74 1543832 2 78446 355146 18.09 433592 3 56660 520079 9.82 576739 4 51233 474750 9.74 525983 5 20221 682586 2.88 702807 6 19367 890420 2.13 909787 7 17611 484539 3.51 502150 8 17745 476133 3.59 493878 9 17290 450827 3.69 468117 10 18047 449522 3.86 467569 11 18230 434507 4.03 452737 12 14856 446963 3.22 461819 13 14440 434848 3.21 449288 14 13473 428019 3.05 441492 15 13127 435404 2.93 448531 16 12768 427416 2.90 440184 17 11750 410898 2.78 422648 18 10829 405013 2.60 415842 19 10639 398548 2.60 409187 20 10076 384927 2.55 395003 21 9637 382982 2.45 392619 22 9860 378553 2.54 388413 23 8714 372077 2.29 380791 24 8790 423857 2.03 432647 25 8346 359060 2.27 367406 26 7622 353243 2.11 360865 27 7178 351799 2.00 358977 28 6949 341938 1.99 348887 29 6374 337171 1.86 343545 30 6205 329769 1.85 335974 31 6030 327324 1.81 333354 32 6244 317521 1.93 323765 33 5781 320429 1.77 326210 34 5233 308151 1.67 313384 35 4878 302647 1.59 307525 36 4591 299779 1.51 304370 37 4652 299046 1.53 303698 38 4285 288793 1.46 293078 39 4140 299896 1.36 304036 40 3713 282882 1.30 286595 41 3609 276409 1.29 280018 42 3338 271409 1.21 274747 43 3236 264921 1.21 268157 44 3034 262645 1.14 265679 45 2855 260321 1.08 263176 46 2707 257963 1.04 260670 47 2583 247773 1.03 250356 48 2433 246220 0.98 248653 49 2328 242281 0.95 244609 50 2120 242992 0.86 245112 51 2062 237595 0.86 239657 52 2028 232540 0.86 234568 53 1846 226206 0.81 228052 54 1640 221030 0.74 222670 55 1727 221916 0.77 223643 56 1549 214475 0.72 216024 57 1577 215761 0.73 217338 58 1477 208582 0.70 210059 59 1409 202324 0.69 203733 60 1412 204641 0.69 206053 61 1328 200577 0.66 201905 62 1227 193851 0.63 195078 63 1255 189077 0.66 190332 64 1196 186822 0.64 188018 65 1205 187288 0.64 188493 66 1076 181752 0.59 182828 67 1041 174706 0.59 175747 68 1081 172495 0.62 173576 69 1024 169517 0.60 170541 70 988 169960 0.58 170948 71 963 164788 0.58 165751 72 1029 159381 0.64 160410 73 998 157223 0.63 158221 74 997 153064 0.65 154061 75 939 152348 0.61 153287 76 905 154326 0.58 155231 77 855 146342 0.58 147197 78 877 142832 0.61 143709 79 759 138783 0.54 139542 80 866 137864 0.62 138730 81 813 134244 0.60 135057 82 849 131622 0.64 132471 83 840 130125 0.64 130965 84 840 128360 0.65 129200 85 829 125217 0.66 126046 86 794 122955 0.64 123749 87 799 123698 0.64 124497 88 716 116775 0.61 117491 89 741 114048 0.65 114789 90 732 114026 0.64 114758 91 752 113131 0.66 113883 92 746 114723 0.65 115469 93 802 121698 0.65 122500 94 728 104426 0.69 105154 95 668 100902 0.66 101570 96 697 99209 0.70 99906 97 632 97087 0.65 97719 98 635 95229 0.66 95864 99 605 94148 0.64 94753 100 607 92198 0.65 92805 101 593 91335 0.65 91928 102 710 94445 0.75 95155 103 621 87421 0.71 88042 104 645 86971 0.74 87616 105 645 85067 0.75 85712 106 539 82501 0.65 83040 107 597 81780 0.72 82377 108 544 78401 0.69 78945 109 537 77481 0.69 78018 110 572 75725 0.75 76297 111 540 74587 0.72 75127 112 588 74130 0.79 74718 113 532 71673 0.74 72205 114 515 71273 0.72 71788 115 490 69904 0.70 70394 116 553 67529 0.81 68082 117 497 67584 0.73 68081 118 508 66371 0.76 66879 119 638 68911 0.92 69549 120 466 65280 0.71 65746 121 515 62536 0.82 63051 122 498 60527 0.82 61025 123 493 59869 0.82 60362 124 451 59637 0.75 60088 125 466 57103 0.81 57569 126 448 55917 0.79 56365 127 494 54147 0.90 54641 128 419 53046 0.78 53465 129 407 52152 0.77 52559 130 450 51707 0.86 52157 131 442 50176 0.87 50618 132 403 49349 0.81 49752 133 399 48775 0.81 49174 134 420 48787 0.85 49207 135 441 47324 0.92 47765 136 439 46814 0.93 47253 137 422 45116 0.93 45538 138 443 43683 1.00 44126 139 678 44736 1.49 45414 140 500 43416 1.14 43916 141 577 43831 1.30 44408 142 1078 50486 2.09 51564 143 424 40098 1.05 40522 144 373 39775 0.93 40148 145 351 38363 0.91 38714 146 325 37804 0.85 38129 147 415 37407 1.10 37822 148 368 36703 0.99 37071 149 311 35580 0.87 35891 150 303 34153 0.88 34456 151 550 28214 1.91 28764 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 410151 1107816 27.02 1517967 2 392067 1625946 19.43 2018013 3 296101 1390977 17.55 1687078 4 285204 1242547 18.67 1527751 5 113081 1635728 6.47 1748809 6 104689 1786460 5.54 1891149 7 99872 2110005 4.52 2209877 8 100714 1945872 4.92 2046586 9 93819 1842992 4.84 1936811 10 90423 1781514 4.83 1871937 11 86432 1729146 4.76 1815578 12 79559 1739545 4.37 1819104 13 78027 1665885 4.47 1743912 14 72087 1619712 4.26 1691799 15 68442 1608945 4.08 1677387 16 69792 1584478 4.22 1654270 17 61229 1523909 3.86 1585138 18 57997 1510606 3.70 1568603 19 54530 1476113 3.56 1530643 20 52321 1452858 3.48 1505179 21 49490 1461891 3.27 1511381 22 50267 1417698 3.42 1467965 23 45636 1376575 3.21 1422211 24 43325 1356208 3.10 1399533 25 42880 1334510 3.11 1377390 26 38785 1306106 2.88 1344891 27 36423 1266572 2.80 1302995 28 35412 1258408 2.74 1293820 29 33851 1293241 2.55 1327092 30 32169 1215563 2.58 1247732 31 30883 1212672 2.48 1243555 32 31277 1183596 2.57 1214873 33 29394 1149793 2.49 1179187 34 27055 1128912 2.34 1155967 35 26344 1122652 2.29 1148996 36 24480 1168103 2.05 1192583 37 24693 1098768 2.20 1123461 38 22716 1072793 2.07 1095509 39 22765 1070967 2.08 1093732 40 20481 1045967 1.92 1066448 41 19979 1036825 1.89 1056804 42 18700 1063216 1.73 1081916 43 18271 1047358 1.71 1065629 44 17386 1033621 1.65 1051007 45 16523 956892 1.70 973415 46 15598 957259 1.60 972857 47 14991 940717 1.57 955708 48 13985 930770 1.48 944755 49 13330 967467 1.36 980797 50 12652 893409 1.40 906061 51 12453 888838 1.38 901291 52 11812 863120 1.35 874932 53 11805 864901 1.35 876706 54 10227 847535 1.19 857762 55 9749 818084 1.18 827833 56 9197 813240 1.12 822437 57 8395 801248 1.04 809643 58 8403 795502 1.05 803905 59 8356 784148 1.05 792504 60 7894 782414 1.00 790308 61 7522 783443 0.95 790965 62 7723 791870 0.97 799593 63 6709 722655 0.92 729364 64 6384 713038 0.89 719422 65 6312 700243 0.89 706555 66 6022 694644 0.86 700666 67 5876 685830 0.85 691706 68 5556 670060 0.82 675616 69 5883 699867 0.83 705750 70 5474 650458 0.83 655932 71 5612 652456 0.85 658068 72 5708 661221 0.86 666929 73 5404 607087 0.88 612491 74 5034 592017 0.84 597051 75 4904 582167 0.84 587071 76 4870 572359 0.84 577229 77 4785 557953 0.85 562738 78 4675 551891 0.84 556566 79 4829 576436 0.83 581265 80 4555 537292 0.84 541847 81 4660 533795 0.87 538455 82 4859 539773 0.89 544632 83 4933 544806 0.90 549739 84 4943 526962 0.93 531905 85 4501 488404 0.91 492905 86 4392 480221 0.91 484613 87 4168 470243 0.88 474411 88 4174 462211 0.89 466385 89 4370 455978 0.95 460348 90 4421 478416 0.92 482837 91 4438 457013 0.96 461451 92 4242 438148 0.96 442390 93 4353 445900 0.97 450253 94 4017 420834 0.95 424851 95 3887 408719 0.94 412606 96 3958 401591 0.98 405549 97 3817 388812 0.97 392629 98 3779 380307 0.98 384086 99 3781 387141 0.97 390922 100 3687 375794 0.97 379481 101 3689 366826 1.00 370515 102 3546 360367 0.97 363913 103 3432 345262 0.98 348694 104 3451 341387 1.00 344838 105 3264 334968 0.97 338232 106 3169 329658 0.95 332827 107 3413 333136 1.01 336549 108 3326 328831 1.00 332157 109 3226 311459 1.03 314685 110 3325 309455 1.06 312780 111 3372 335758 0.99 339130 112 3141 294536 1.06 297677 113 3094 288439 1.06 291533 114 3041 284885 1.06 287926 115 2973 277514 1.06 280487 116 3111 267432 1.15 270543 117 3420 264446 1.28 267866 118 3120 258428 1.19 261548 119 3217 254898 1.25 258115 120 2837 248938 1.13 251775 121 2747 243271 1.12 246018 122 2864 242872 1.17 245736 123 2756 239581 1.14 242337 124 2731 237892 1.13 240623 125 3034 252676 1.19 255710 126 2754 220973 1.23 223727 127 2661 218305 1.20 220966 128 2822 218269 1.28 221091 129 2650 214589 1.22 217239 130 2893 226511 1.26 229404 131 2678 207848 1.27 210526 132 2485 200381 1.22 202866 133 2543 195683 1.28 198226 134 2596 193857 1.32 196453 135 2506 188572 1.31 191078 136 2388 186112 1.27 188500 137 2658 184757 1.42 187415 138 2534 180694 1.38 183228 139 2772 183618 1.49 186390 140 3014 181034 1.64 184048 141 2636 169126 1.53 171762 142 2837 172952 1.61 175789 143 2567 168362 1.50 170929 144 2263 159709 1.40 161972 145 2185 157181 1.37 159366 146 2273 154941 1.45 157214 147 2454 160038 1.51 162492 148 2110 146562 1.42 148672 149 2230 142792 1.54 145022 150 1793 138535 1.28 140328 151 1628 112909 1.42 114537