CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 496432 1256035 28.33 1752467 2 534635 2211393 19.47 2746028 3 457528 2491793 15.51 2949321 4 390872 1856730 17.39 2247602 5 226923 2591584 8.05 2818507 6 191111 1674994 10.24 1866105 7 179369 1565517 10.28 1744886 8 191938 1697917 10.16 1889855 9 193517 1642212 10.54 1835729 10 201559 1658067 10.84 1859626 11 207176 1731543 10.69 1938719 12 210751 1716965 10.93 1927716 13 211347 1711613 10.99 1922960 14 212605 1800528 10.56 2013133 15 215357 1806876 10.65 2022233 16 217255 1764343 10.96 1981598 17 214638 1755752 10.89 1970390 18 213728 1864465 10.28 2078193 19 211803 1842310 10.31 2054113 20 214302 1848503 10.39 2062805 21 214547 1866021 10.31 2080568 22 213127 1845663 10.35 2058790 23 216718 1890083 10.29 2106801 24 213485 1906643 10.07 2120128 25 216154 1919284 10.12 2135438 26 216616 1989147 9.82 2205763 27 215015 1939046 9.98 2154061 28 218086 1936137 10.12 2154223 29 218777 1977054 9.96 2195831 30 217285 1980503 9.89 2197788 31 216926 1968713 9.93 2185639 32 218519 2006571 9.82 2225090 33 219525 2046432 9.69 2265957 34 217405 2053563 9.57 2270968 35 216739 1984936 9.84 2201675 36 214891 2001684 9.69 2216575 37 217492 1995662 9.83 2213154 38 214288 2003138 9.66 2217426 39 218534 2010452 9.80 2228986 40 213612 1986943 9.71 2200555 41 215318 1979511 9.81 2194829 42 211770 1990052 9.62 2201822 43 213749 1992866 9.69 2206615 44 213164 1995938 9.65 2209102 45 211656 1989123 9.62 2200779 46 212974 1987560 9.68 2200534 47 211369 2015040 9.49 2226409 48 213168 2030651 9.50 2243819 49 210559 1985236 9.59 2195795 50 211431 1998400 9.57 2209831 51 211593 1988906 9.62 2200499 52 211886 1978304 9.67 2190190 53 213134 1971837 9.75 2184971 54 210900 1974418 9.65 2185318 55 207963 1973499 9.53 2181462 56 210907 1966894 9.68 2177801 57 209308 2003844 9.46 2213152 58 208286 1975409 9.54 2183695 59 209058 1962522 9.63 2171580 60 206532 1955439 9.55 2161971 61 208574 1943523 9.69 2152097 62 208256 1925676 9.76 2133932 63 205009 1933639 9.59 2138648 64 203266 1920581 9.57 2123847 65 203495 1889196 9.72 2092691 66 200536 1873579 9.67 2074115 67 200286 1859543 9.72 2059829 68 199491 1872604 9.63 2072095 69 198472 1868777 9.60 2067249 70 197271 1869129 9.55 2066400 71 196755 1854207 9.59 2050962 72 196159 1865449 9.51 2061608 73 194353 1812241 9.69 2006594 74 195648 1797420 9.82 1993068 75 191800 1803682 9.61 1995482 76 193215 1781760 9.78 1974975 77 190562 1773442 9.70 1964004 78 188264 1753479 9.70 1941743 79 186261 1746933 9.63 1933194 80 184594 1711088 9.74 1895682 81 184146 1699078 9.78 1883224 82 183454 1690656 9.79 1874110 83 181186 1663828 9.82 1845014 84 179295 1665969 9.72 1845264 85 178325 1633688 9.84 1812013 86 176207 1617846 9.82 1794053 87 174867 1584242 9.94 1759109 88 173286 1568967 9.95 1742253 89 172662 1556825 9.98 1729487 90 169177 1547030 9.86 1716207 91 169314 1540618 9.90 1709932 92 167339 1503541 10.02 1670880 93 165960 1501186 9.95 1667146 94 164103 1482474 9.97 1646577 95 162699 1464826 10.00 1627525 96 161152 1451170 10.00 1612322 97 158487 1436268 9.94 1594755 98 156963 1405314 10.05 1562277 99 154634 1406617 9.90 1561251 100 153395 1380919 10.00 1534314 101 151713 1358303 10.05 1510016 102 149794 1350965 9.98 1500759 103 147817 1337724 9.95 1485541 104 145747 1322451 9.93 1468198 105 143518 1285480 10.04 1428998 106 141373 1267313 10.04 1408686 107 140588 1240481 10.18 1381069 108 139589 1237408 10.14 1376997 109 138452 1244008 10.01 1382460 110 136790 1222716 10.06 1359506 111 135407 1194161 10.18 1329568 112 133935 1172680 10.25 1306615 113 131970 1175822 10.09 1307792 114 130170 1187752 9.88 1317922 115 127078 1118119 10.21 1245197 116 127294 1107725 10.31 1235019 117 124556 1082155 10.32 1206711 118 123131 1065470 10.36 1188601 119 122505 1056265 10.39 1178770 120 120777 1072715 10.12 1193492 121 119801 1027014 10.45 1146815 122 116767 1023141 10.24 1139908 123 116745 1062016 9.90 1178761 124 114346 965572 10.59 1079918 125 111219 954848 10.43 1066067 126 110762 943074 10.51 1053836 127 108175 925614 10.46 1033789 128 108523 923445 10.52 1031968 129 105047 915707 10.29 1020754 130 103844 878260 10.57 982104 131 102527 869753 10.55 972280 132 101277 856334 10.58 957611 133 99243 841419 10.55 940662 134 97618 830608 10.52 928226 135 95920 814569 10.53 910489 136 94191 801579 10.52 895770 137 94327 799068 10.56 893395 138 92625 787654 10.52 880279 139 90517 772775 10.49 863292 140 89422 755167 10.59 844589 141 87550 750552 10.45 838102 142 86398 731396 10.56 817794 143 85029 707829 10.72 792858 144 84319 697099 10.79 781418 145 81552 685172 10.64 766724 146 81151 681686 10.64 762837 147 80968 675605 10.70 756573 148 80683 668302 10.77 748985 149 82189 655894 11.14 738083 150 77654 645829 10.73 723483 151 68558 600500 10.25 669058 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 555773 4123052 11.88 4678825 2 361039 1344726 21.17 1705765 3 224431 2120564 9.57 2344995 4 204721 1803204 10.20 2007925 5 76102 2461139 3.00 2537241 6 70904 3117533 2.22 3188437 7 66259 2008068 3.19 2074327 8 68157 2020435 3.26 2088592 9 59329 1991445 2.89 2050774 10 64844 2031832 3.09 2096676 11 57874 2032264 2.77 2090138 12 53550 2135104 2.45 2188654 13 50169 2115194 2.32 2165363 14 59543 2132175 2.72 2191718 15 47059 2183823 2.11 2230882 16 53363 2173060 2.40 2226423 17 42739 2194542 1.91 2237281 18 38072 2199506 1.70 2237578 19 36978 2229471 1.63 2266449 20 38745 2193890 1.74 2232635 21 35257 2212059 1.57 2247316 22 36282 2252619 1.59 2288901 23 33483 2255536 1.46 2289019 24 33425 2384678 1.38 2418103 25 33325 2278585 1.44 2311910 26 30740 2262457 1.34 2293197 27 30010 2282710 1.30 2312720 28 29831 2278123 1.29 2307954 29 28628 2278526 1.24 2307154 30 28273 2287068 1.22 2315341 31 27425 2294448 1.18 2321873 32 29083 2293093 1.25 2322176 33 27826 2319618 1.19 2347444 34 26111 2306100 1.12 2332211 35 25292 2309259 1.08 2334551 36 24517 2337410 1.04 2361927 37 25072 2346085 1.06 2371157 38 24039 2327552 1.02 2351591 39 23897 2354124 1.00 2378021 40 22780 2338523 0.96 2361303 41 22558 2336032 0.96 2358590 42 22173 2341872 0.94 2364045 43 21798 2332680 0.93 2354478 44 21326 2340358 0.90 2361684 45 21054 2355423 0.89 2376477 46 20837 2358384 0.88 2379221 47 19915 2336279 0.85 2356194 48 19918 2350008 0.84 2369926 49 19979 2347324 0.84 2367303 50 19422 2369607 0.81 2389029 51 20052 2349286 0.85 2369338 52 19884 2346688 0.84 2366572 53 19746 2319968 0.84 2339714 54 19169 2319596 0.82 2338765 55 19071 2332303 0.81 2351374 56 19103 2320436 0.82 2339539 57 18905 2344239 0.80 2363144 58 18903 2312157 0.81 2331060 59 19110 2300559 0.82 2319669 60 19187 2321606 0.82 2340793 61 19009 2294332 0.82 2313341 62 19145 2266435 0.84 2285580 63 19079 2247283 0.84 2266362 64 19299 2256425 0.85 2275724 65 19275 2249119 0.85 2268394 66 19213 2241477 0.85 2260690 67 19780 2216026 0.88 2235806 68 19800 2210105 0.89 2229905 69 20084 2217977 0.90 2238061 70 19990 2196131 0.90 2216121 71 20103 2178647 0.91 2198750 72 20341 2152322 0.94 2172663 73 20564 2137883 0.95 2158447 74 20815 2114332 0.97 2135147 75 20687 2121084 0.97 2141771 76 20882 2127603 0.97 2148485 77 21170 2078287 1.01 2099457 78 21526 2058329 1.03 2079855 79 21499 2025493 1.05 2046992 80 21806 2021057 1.07 2042863 81 22055 1990632 1.10 2012687 82 22294 1972436 1.12 1994730 83 22471 1959783 1.13 1982254 84 22389 1950477 1.13 1972866 85 22679 1929768 1.16 1952447 86 22447 1910736 1.16 1933183 87 23028 1915168 1.19 1938196 88 23304 1858635 1.24 1881939 89 23238 1842342 1.25 1865580 90 23051 1827475 1.25 1850526 91 23372 1806654 1.28 1830026 92 23745 1792169 1.31 1815914 93 23978 1791079 1.32 1815057 94 23492 1735539 1.34 1759031 95 23705 1703755 1.37 1727460 96 23682 1685901 1.39 1709583 97 23580 1664884 1.40 1688464 98 23476 1645158 1.41 1668634 99 23629 1629344 1.43 1652973 100 23395 1608045 1.43 1631440 101 23906 1590305 1.48 1614211 102 24200 1585578 1.50 1609778 103 23797 1546570 1.52 1570367 104 23831 1533325 1.53 1557156 105 23686 1513147 1.54 1536833 106 23749 1488606 1.57 1512355 107 23392 1472612 1.56 1496004 108 23731 1442179 1.62 1465910 109 23504 1432606 1.61 1456110 110 23519 1412914 1.64 1436433 111 23884 1386449 1.69 1410333 112 23565 1370487 1.69 1394052 113 23501 1344636 1.72 1368137 114 23480 1334128 1.73 1357608 115 23452 1317987 1.75 1341439 116 23367 1294336 1.77 1317703 117 23563 1272978 1.82 1296541 118 23299 1253346 1.83 1276645 119 23743 1249516 1.86 1273259 120 23194 1229852 1.85 1253046 121 23199 1208071 1.88 1231270 122 22878 1181214 1.90 1204092 123 22866 1167916 1.92 1190782 124 22830 1151757 1.94 1174587 125 22849 1127099 1.99 1149948 126 22924 1116405 2.01 1139329 127 22796 1088472 2.05 1111268 128 22352 1073243 2.04 1095595 129 22166 1053532 2.06 1075698 130 21933 1039023 2.07 1060956 131 21736 1017606 2.09 1039342 132 21875 1004085 2.13 1025960 133 21497 988742 2.13 1010239 134 21513 969735 2.17 991248 135 21442 958442 2.19 979884 136 20992 946827 2.17 967819 137 21144 918972 2.25 940116 138 20991 908901 2.26 929892 139 21479 895890 2.34 917369 140 20666 879448 2.30 900114 141 20489 865947 2.31 886436 142 22024 867274 2.48 889298 143 19892 829367 2.34 849259 144 19902 816995 2.38 836897 145 20077 804883 2.43 824960 146 19838 799868 2.42 819706 147 19718 789407 2.44 809125 148 20248 780066 2.53 800314 149 20892 765991 2.66 786883 150 23858 768376 3.01 792234 151 29967 698182 4.12 728149 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1935785 4894091 28.34 6829876 2 1831789 6153567 22.94 7985356 3 1313863 6075829 17.78 7389692 4 1258639 5716912 18.04 6975551 5 495116 6802641 6.78 7297757 6 444320 7473269 5.61 7917589 7 420648 8436699 4.75 8857347 8 385535 8265865 4.46 8651400 9 374847 8082415 4.43 8457262 10 345431 8065747 4.11 8411178 11 336150 8031418 4.02 8367568 12 300181 8065774 3.59 8365955 13 302665 7967957 3.66 8270622 14 281199 7889857 3.44 8171056 15 271448 7884146 3.33 8155594 16 281343 7867980 3.45 8149323 17 250191 7743185 3.13 7993376 18 227042 7777626 2.84 8004668 19 220666 7713193 2.78 7933859 20 229699 7695171 2.90 7924870 21 211381 7802165 2.64 8013546 22 214510 7721925 2.70 7936435 23 199680 7690229 2.53 7889909 24 191610 7698414 2.43 7890024 25 194558 7660984 2.48 7855542 26 184148 7651456 2.35 7835604 27 178489 7627145 2.29 7805634 28 177289 7711784 2.25 7889073 29 170887 7815898 2.14 7986785 30 166096 7777273 2.09 7943369 31 162330 7819586 2.03 7981916 32 166217 7827535 2.08 7993752 33 160097 7819974 2.01 7980071 34 152562 7832510 1.91 7985072 35 148778 7879722 1.85 8028500 36 142304 8035087 1.74 8177391 37 146883 7986315 1.81 8133198 38 139028 7970903 1.71 8109931 39 139900 8009267 1.72 8149167 40 131899 8049637 1.61 8181536 41 129767 8100851 1.58 8230618 42 124663 8179073 1.50 8303736 43 122690 8228685 1.47 8351375 44 118798 8243201 1.42 8361999 45 116567 8117747 1.42 8234314 46 114443 8174428 1.38 8288871 47 111461 8181412 1.34 8292873 48 106739 8198157 1.29 8304896 49 105974 8293397 1.26 8399371 50 103031 8190426 1.24 8293457 51 103455 8207602 1.24 8311057 52 101078 8178466 1.22 8279544 53 101774 8211182 1.22 8312956 54 94801 8178853 1.15 8273654 55 95016 8143360 1.15 8238376 56 92499 8161981 1.12 8254480 57 91082 8131314 1.11 8222396 58 91367 8141825 1.11 8233192 59 91331 8118059 1.11 8209390 60 89710 8150870 1.09 8240580 61 90875 8137845 1.10 8228720 62 90637 8127202 1.10 8217839 63 90030 7950866 1.12 8040896 64 88664 7943485 1.10 8032149 65 89420 7908918 1.12 7998338 66 88920 7921616 1.11 8010536 67 89961 7914920 1.12 8004881 68 90922 7823119 1.15 7914041 69 91858 7834898 1.16 7926756 70 90667 7714439 1.16 7805106 71 92164 7724772 1.18 7816936 72 93147 7675338 1.20 7768485 73 94347 7529295 1.24 7623642 74 93118 7462682 1.23 7555800 75 93172 7415060 1.24 7508232 76 94302 7347314 1.27 7441616 77 94594 7280123 1.28 7374717 78 95403 7222995 1.30 7318398 79 97234 7229974 1.33 7327208 80 97263 7101262 1.35 7198525 81 98316 7070285 1.37 7168601 82 99312 7028935 1.39 7128247 83 99917 6970937 1.41 7070854 84 100428 6903665 1.43 7004093 85 100775 6784791 1.46 6885566 86 101105 6733165 1.48 6834270 87 101809 6632994 1.51 6734803 88 103075 6559313 1.55 6662388 89 104570 6510980 1.58 6615550 90 104813 6494175 1.59 6598988 91 106772 6410557 1.64 6517329 92 106786 6332601 1.66 6439387 93 107346 6288838 1.68 6396184 94 107448 6186549 1.71 6293997 95 107199 6106254 1.73 6213453 96 106436 6023734 1.74 6130170 97 106826 5918695 1.77 6025521 98 106086 5850741 1.78 5956827 99 107589 5828329 1.81 5935918 100 107059 5740496 1.83 5847555 101 106710 5662459 1.85 5769169 102 106710 5583203 1.88 5689913 103 107059 5475523 1.92 5582582 104 107178 5421699 1.94 5528877 105 107428 5371063 1.96 5478491 106 107859 5330449 1.98 5438308 107 107736 5268628 2.00 5376364 108 108311 5200618 2.04 5308929 109 106762 5077190 2.06 5183952 110 107066 5009578 2.09 5116644 111 108305 5021524 2.11 5129829 112 107045 4879553 2.15 4986598 113 107341 4790254 2.19 4897595 114 106012 4713324 2.20 4819336 115 105925 4653331 2.23 4759256 116 105725 4564264 2.26 4669989 117 105576 4503612 2.29 4609188 118 105377 4434638 2.32 4540015 119 106081 4383490 2.36 4489571 120 103873 4305220 2.36 4409093 121 103191 4233747 2.38 4336938 122 102437 4175675 2.39 4278112 123 102112 4113034 2.42 4215146 124 101853 4050093 2.45 4151946 125 102640 4042522 2.48 4145162 126 100505 3899775 2.51 4000280 127 100068 3852821 2.53 3952889 128 100617 3803322 2.58 3903939 129 99232 3747104 2.58 3846336 130 99118 3729786 2.59 3828904 131 98245 3638250 2.63 3736495 132 98575 3573883 2.68 3672458 133 97575 3505711 2.71 3603286 134 97025 3447663 2.74 3544688 135 95515 3390991 2.74 3486506 136 95376 3342399 2.77 3437775 137 95837 3311803 2.81 3407640 138 94068 3247575 2.82 3341643 139 95127 3217186 2.87 3312313 140 95488 3159737 2.93 3255225 141 92620 3071837 2.93 3164457 142 93689 3052918 2.98 3146607 143 91737 2986381 2.98 3078118 144 90806 2914723 3.02 3005529 145 91508 2877333 3.08 2968841 146 90747 2839252 3.10 2929999 147 92234 2825753 3.16 2917987 148 92370 2754390 3.24 2846760 149 94458 2717005 3.36 2811463 150 97502 2707960 3.48 2805462 151 116187 2475113 4.48 2591300 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 134119 396946 25.25 531065 2 141815 806405 14.96 948220 3 128092 817286 13.55 945378 4 109028 601234 15.35 710262 5 67256 962172 6.53 1029428 6 50903 494043 9.34 544946 7 49308 461456 9.65 510764 8 53418 460906 10.39 514324 9 53699 444872 10.77 498571 10 55859 435722 11.36 491581 11 56659 472174 10.71 528833 12 56953 441171 11.43 498124 13 56767 422834 11.84 479601 14 55760 449667 11.03 505427 15 55547 427462 11.50 483009 16 54421 417376 11.53 471797 17 53336 405489 11.62 458825 18 52848 407518 11.48 460366 19 51190 406926 11.17 458116 20 50954 399543 11.31 450497 21 49570 396208 11.12 445778 22 48381 376268 11.39 424649 23 48800 383341 11.29 432141 24 47544 375339 11.24 422883 25 46891 374855 11.12 421746 26 45908 384209 10.67 430117 27 45082 361120 11.10 406202 28 44884 353402 11.27 398286 29 44205 357600 11.00 401805 30 42469 351098 10.79 393567 31 41862 340805 10.94 382667 32 41811 341407 10.91 383218 33 42193 355802 10.60 397995 34 41075 379720 9.76 420795 35 38876 322530 10.76 361406 36 37839 318643 10.61 356482 37 38224 312754 10.89 350978 38 36373 306819 10.60 343192 39 36398 304172 10.69 340570 40 34900 294145 10.61 329045 41 34326 287070 10.68 321396 42 33313 287723 10.38 321036 43 32860 288183 10.24 321043 44 33013 279273 10.57 312286 45 31775 270491 10.51 302266 46 30986 267059 10.40 298045 47 30748 271602 10.17 302350 48 30234 271410 10.02 301644 49 29270 254896 10.30 284166 50 28638 251371 10.23 280009 51 28411 245882 10.36 274293 52 28036 241826 10.39 269862 53 27679 236868 10.46 264547 54 27392 235458 10.42 262850 55 26438 228866 10.36 255304 56 26574 227264 10.47 253838 57 25995 227303 10.26 253298 58 25240 223075 10.16 248315 59 24965 219928 10.19 244893 60 24253 216190 10.09 240443 61 24482 214486 10.24 238968 62 24660 209251 10.54 233911 63 23233 209113 10.00 232346 64 22908 204609 10.07 227517 65 22533 194326 10.39 216859 66 22215 190613 10.44 212828 67 21694 186295 10.43 207989 68 21204 186437 10.21 207641 69 21054 184217 10.26 205271 70 20787 182264 10.24 203051 71 20530 180084 10.23 200614 72 20334 180848 10.11 201182 73 19916 173301 10.31 193217 74 19917 170572 10.46 190489 75 19414 171773 10.15 191187 76 18996 164504 10.35 183500 77 18804 161502 10.43 180306 78 18176 157360 10.35 175536 79 18088 155843 10.40 173931 80 17648 155198 10.21 172846 81 17298 150351 10.32 167649 82 17331 149289 10.40 166620 83 16874 146826 10.31 163700 84 16698 146898 10.21 163596 85 16165 140455 10.32 156620 86 15973 135577 10.54 151550 87 15730 132120 10.64 147850 88 15463 130002 10.63 145465 89 15289 129222 10.58 144511 90 14815 128374 10.35 143189 91 15130 136063 10.01 151193 92 14251 122739 10.40 136990 93 14240 122991 10.38 137231 94 14008 121747 10.32 135755 95 13815 117602 10.51 131417 96 13519 116707 10.38 130226 97 13026 116512 10.06 129538 98 12949 110961 10.45 123910 99 12635 114235 9.96 126870 100 12588 111741 10.12 124329 101 12219 105838 10.35 118057 102 12113 105755 10.28 117868 103 12028 104374 10.33 116402 104 11606 105236 9.93 116842 105 11250 100094 10.10 111344 106 11357 97793 10.40 109150 107 11118 93891 10.59 105009 108 11107 95894 10.38 107001 109 11042 105639 9.46 116681 110 10605 94371 10.10 104976 111 10689 92124 10.40 102813 112 10828 90240 10.71 101068 113 10632 96522 9.92 107154 114 10814 116369 8.50 127183 115 9697 83505 10.40 93202 116 9792 82711 10.59 92503 117 9537 80197 10.63 89734 118 9478 79778 10.62 89256 119 9771 79240 10.98 89011 120 9685 90054 9.71 99739 121 9304 75875 10.92 85179 122 9074 80808 10.10 89882 123 9375 105803 8.14 115178 124 8603 70089 10.93 78692 125 8276 68298 10.81 76574 126 8397 67248 11.10 75645 127 8091 66518 10.84 74609 128 8025 67645 10.61 75670 129 7978 71088 10.09 79066 130 7634 61072 11.11 68706 131 7629 60693 11.17 68322 132 7320 61220 10.68 68540 133 7299 58884 11.03 66183 134 7199 61777 10.44 68976 135 6845 57166 10.69 64011 136 7137 56480 11.22 63617 137 6951 57881 10.72 64832 138 6776 55878 10.81 62654 139 6484 54408 10.65 60892 140 6415 53071 10.78 59486 141 6348 54765 10.39 61113 142 6286 53047 10.59 59333 143 5987 48902 10.91 54889 144 5912 48111 10.94 54023 145 5769 47122 10.91 52891 146 5641 46858 10.74 52499 147 5696 46861 10.84 52557 148 5606 46442 10.77 52048 149 5477 45244 10.80 50721 150 4983 43471 10.28 48454 151 3826 36414 9.51 40240 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 181344 1635155 9.98 1816499 2 94475 388210 19.57 482685 3 67280 604045 10.02 671325 4 61209 549896 10.02 611105 5 24591 800824 2.98 825415 6 23771 1048934 2.22 1072705 7 21218 561973 3.64 583191 8 21207 553658 3.69 574865 9 20686 525784 3.79 546470 10 20698 526527 3.78 547225 11 20743 509002 3.92 529745 12 17792 524617 3.28 542409 13 17877 507687 3.40 525564 14 16284 500831 3.15 517115 15 16104 513322 3.04 529426 16 15040 500983 2.91 516023 17 14326 481472 2.89 495798 18 13239 476486 2.70 489725 19 12884 470481 2.67 483365 20 12400 456012 2.65 468412 21 11852 452882 2.55 464734 22 11939 449277 2.59 461216 23 10929 444082 2.40 455011 24 10744 497501 2.11 508245 25 10259 427750 2.34 438009 26 9549 422156 2.21 431705 27 9015 420899 2.10 429914 28 8832 409849 2.11 418681 29 8271 401320 2.02 409591 30 7997 393453 1.99 401450 31 7618 392801 1.90 400419 32 7959 381135 2.05 389094 33 7516 385692 1.91 393208 34 7120 369936 1.89 377056 35 6640 365046 1.79 371686 36 6281 362565 1.70 368846 37 6264 362952 1.70 369216 38 5816 349962 1.63 355778 39 5702 363402 1.54 369104 40 5188 342104 1.49 347292 41 5078 336087 1.49 341165 42 4872 330699 1.45 335571 43 4662 323386 1.42 328048 44 4401 320924 1.35 325325 45 4334 318538 1.34 322872 46 3865 314511 1.21 318376 47 3883 303229 1.26 307112 48 3646 301790 1.19 305436 49 3462 297496 1.15 300958 50 3546 299338 1.17 302884 51 3323 291236 1.13 294559 52 3221 286584 1.11 289805 53 3072 277918 1.09 280990 54 2829 272349 1.03 275178 55 2778 273424 1.01 276202 56 2655 266379 0.99 269034 57 2609 268320 0.96 270929 58 2606 259623 0.99 262229 59 2462 251059 0.97 253521 60 2343 254181 0.91 256524 61 2228 246584 0.90 248812 62 2233 239717 0.92 241950 63 2140 235459 0.90 237599 64 2130 232737 0.91 234867 65 2271 233717 0.96 235988 66 2081 227340 0.91 229421 67 1950 219157 0.88 221107 68 1955 217831 0.89 219786 69 1942 213335 0.90 215277 70 1871 213438 0.87 215309 71 1920 208087 0.91 210007 72 1939 201232 0.95 203171 73 1880 199158 0.94 201038 74 1780 193841 0.91 195621 75 1766 193600 0.90 195366 76 1731 195356 0.88 197087 77 1624 185507 0.87 187131 78 1673 181284 0.91 182957 79 1639 177137 0.92 178776 80 1612 175684 0.91 177296 81 1573 170921 0.91 172494 82 1664 168229 0.98 169893 83 1562 165969 0.93 167531 84 1633 164886 0.98 166519 85 1571 160655 0.97 162226 86 1597 158277 1.00 159874 87 1503 162392 0.92 163895 88 1428 149493 0.95 150921 89 1480 147406 0.99 148886 90 1418 147650 0.95 149068 91 1370 145801 0.93 147171 92 1446 148960 0.96 150406 93 1489 157956 0.93 159445 94 1297 136377 0.94 137674 95 1259 130920 0.95 132179 96 1242 129780 0.95 131022 97 1222 126959 0.95 128181 98 1154 124111 0.92 125265 99 1260 122423 1.02 123683 100 1182 120793 0.97 121975 101 1229 119703 1.02 120932 102 1269 123531 1.02 124800 103 1180 115380 1.01 116560 104 1118 114690 0.97 115808 105 1194 111859 1.06 113053 106 1091 109335 0.99 110426 107 1077 107956 0.99 109033 108 1081 104487 1.02 105568 109 1117 102998 1.07 104115 110 1068 102903 1.03 103971 111 1039 98639 1.04 99678 112 1116 98210 1.12 99326 113 1037 95138 1.08 96175 114 1044 95168 1.09 96212 115 1009 93301 1.07 94310 116 952 91245 1.03 92197 117 1007 91003 1.09 92010 118 1003 89214 1.11 90217 119 1141 92003 1.22 93144 120 971 86928 1.10 87899 121 896 84514 1.05 85410 122 940 82209 1.13 83149 123 903 81781 1.09 82684 124 956 80397 1.18 81353 125 999 77638 1.27 78637 126 931 77028 1.19 77959 127 850 74357 1.13 75207 128 852 73117 1.15 73969 129 862 71711 1.19 72573 130 862 70802 1.20 71664 131 853 68497 1.23 69350 132 814 67605 1.19 68419 133 861 67762 1.25 68623 134 788 66537 1.17 67325 135 768 64937 1.17 65705 136 816 64835 1.24 65651 137 786 62035 1.25 62821 138 781 61569 1.25 62350 139 1095 61452 1.75 62547 140 870 60252 1.42 61122 141 1033 60348 1.68 61381 142 1595 67201 2.32 68796 143 736 55826 1.30 56562 144 739 55464 1.31 56203 145 667 54612 1.21 55279 146 683 53839 1.25 54522 147 632 52275 1.19 52907 148 722 52349 1.36 53071 149 603 50206 1.19 50809 150 616 48047 1.27 48663 151 759 39167 1.90 39926 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 483938 1238860 28.09 1722798 2 468649 1871140 20.03 2339789 3 352360 1597837 18.07 1950197 4 338484 1431189 19.13 1769673 5 135812 1900060 6.67 2035872 6 126236 2100391 5.67 2226627 7 120755 2499006 4.61 2619761 8 119576 2303960 4.93 2423536 9 114573 2185137 4.98 2299710 10 110804 2128749 4.95 2239553 11 104747 2067107 4.82 2171854 12 96375 2080020 4.43 2176395 13 94688 1995192 4.53 2089880 14 86574 1938460 4.28 2025034 15 82871 1932287 4.11 2015158 16 83629 1906599 4.20 1990228 17 74143 1834031 3.89 1908174 18 70093 1820319 3.71 1890412 19 66081 1782867 3.57 1848948 20 63082 1753810 3.47 1816892 21 60561 1774474 3.30 1835035 22 61697 1733058 3.44 1794755 23 56178 1668920 3.26 1725098 24 53499 1659224 3.12 1712723 25 52930 1621324 3.16 1674254 26 47846 1587118 2.93 1634964 27 45245 1536985 2.86 1582230 28 44605 1534876 2.82 1579481 29 42632 1573618 2.64 1616250 30 40227 1478739 2.65 1518966 31 38699 1477313 2.55 1516012 32 38889 1446368 2.62 1485257 33 37671 1400898 2.62 1438569 34 35232 1380077 2.49 1415309 35 34087 1377629 2.41 1411716 36 32082 1431903 2.19 1463985 37 31984 1353329 2.31 1385313 38 29432 1323188 2.18 1352620 39 29986 1322199 2.22 1352185 40 27073 1287120 2.06 1314193 41 26546 1278215 2.03 1304761 42 25555 1314332 1.91 1339887 43 24227 1296690 1.83 1320917 44 23464 1275889 1.81 1299353 45 22454 1181876 1.86 1204330 46 21324 1183014 1.77 1204338 47 20677 1167391 1.74 1188068 48 19619 1159288 1.66 1178907 49 19248 1202609 1.58 1221857 50 17932 1115237 1.58 1133169 51 18113 1112285 1.60 1130398 52 17479 1077307 1.60 1094786 53 17373 1084323 1.58 1101696 54 15376 1059357 1.43 1074733 55 14757 1024216 1.42 1038973 56 14002 1022801 1.35 1036803 57 13468 1010426 1.32 1023894 58 13197 1002022 1.30 1015219 59 13299 985204 1.33 998503 60 12522 988442 1.25 1000964 61 12256 995292 1.22 1007548 62 12500 1000286 1.23 1012786 63 11408 916748 1.23 928156 64 10815 904535 1.18 915350 65 10645 888038 1.18 898683 66 10443 887292 1.16 897735 67 9870 879404 1.11 889274 68 9833 854763 1.14 864596 69 10036 892462 1.11 902498 70 9544 834151 1.13 843695 71 9899 840586 1.16 850485 72 10099 845903 1.18 856002 73 9580 785832 1.20 795412 74 8910 758508 1.16 767418 75 8599 746652 1.14 755251 76 8530 737199 1.14 745729 77 8536 721711 1.17 730247 78 8406 715736 1.16 724142 79 8833 746563 1.17 755396 80 8329 698590 1.18 706919 81 8093 692231 1.16 700324 82 8592 697227 1.22 705819 83 8786 706301 1.23 715087 84 8366 684109 1.21 692475 85 8000 636997 1.24 644997 86 7767 626376 1.22 634143 87 7620 616535 1.22 624155 88 7488 606505 1.22 613993 89 7642 600872 1.26 608514 90 7810 627242 1.23 635052 91 7668 604227 1.25 611895 92 7498 582746 1.27 590244 93 7764 590144 1.30 597908 94 7165 559857 1.26 567022 95 6877 544271 1.25 551148 96 7089 536234 1.30 543323 97 6888 517578 1.31 524466 98 6683 506217 1.30 512900 99 6887 516228 1.32 523115 100 6885 500648 1.36 507533 101 6496 490467 1.31 496963 102 6431 484592 1.31 491023 103 6545 464236 1.39 470781 104 6462 460056 1.39 466518 105 6355 452440 1.39 458795 106 6138 445913 1.36 452051 107 6238 448125 1.37 454363 108 6164 445181 1.37 451345 109 5914 420723 1.39 426637 110 6008 420372 1.41 426380 111 6366 456206 1.38 462572 112 5778 401242 1.42 407020 113 5806 393060 1.46 398866 114 5659 388854 1.43 394513 115 5475 378634 1.43 384109 116 5649 367716 1.51 373365 117 5930 362066 1.61 367996 118 5460 355980 1.51 361440 119 5600 351697 1.57 357297 120 5182 344047 1.48 349229 121 4981 335750 1.46 340731 122 5189 336035 1.52 341224 123 4951 331197 1.47 336148 124 5178 330402 1.54 335580 125 5417 349362 1.53 354779 126 4840 307029 1.55 311869 127 4813 303869 1.56 308682 128 5005 304550 1.62 309555 129 4808 300937 1.57 305745 130 5208 316828 1.62 322036 131 4724 290943 1.60 295667 132 4589 280589 1.61 285178 133 4529 275428 1.62 279957 134 4627 272416 1.67 277043 135 4483 264328 1.67 268811 136 4341 261392 1.63 265733 137 4509 261260 1.70 265769 138 4329 255191 1.67 259520 139 4753 261201 1.79 265954 140 5402 260753 2.03 266155 141 4722 241036 1.92 245758 142 5019 248573 1.98 253592 143 4575 241014 1.86 245589 144 4145 228227 1.78 232372 145 4022 224369 1.76 228391 146 3992 221084 1.77 225076 147 4211 228202 1.81 232413 148 3846 209126 1.81 212972 149 3604 205638 1.72 209242 150 3120 198504 1.55 201624 151 2644 157821 1.65 160465