FastQCFastQC Report
Thu 10 Apr 2025
trimmed_ACR-178-TP2_S1_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametrimmed_ACR-178-TP2_S1_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182967324
Total Bases21.4 Gbp
Sequences flagged as poor quality0
Sequence length20-151
%GC23

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4789640.2617757037316674No Hit
CCTCAAAATAAACAACTTTTTCTACAAAATACCATACACTAAAATTTTAA3209620.1754203936436213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)