FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5p_S121_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5p_S121_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences150791
Total Bases45.3 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC53

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC2117214.040625766789795No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG1550610.283107081987652No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTCCTC86565.740395646955057No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT69074.5805120995284865No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT56033.7157390029908948No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGCATTT44822.9723259345716917No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT42962.8489763977956244No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC26701.7706627053338728No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG25561.6950613763420892No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT15351.017965263178837No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGACCCAC12560.8329409580147357No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC11110.7367813728936077No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAGGCCTCG10570.7009702170553945No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT10310.6837278086888475No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC9500.6300110749315277No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA7800.5172722509964123No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC7750.5139564032336148No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG6780.44962895663534297No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG5430.3601010670398101No Hit
GTACACACCGCCCGTCGCTACTACCGATGGATGATTTGGTGAGGTCGCCT5430.3601010670398101No Hit
GTACACACCGCCCGTCGCTCCTAGCGATTTGAGTGGTCCGGTGAATCTTT5290.350816693303977No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTGGAC4760.3156687070183234No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC4280.28383656849546723No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC4170.2765417034173127No Hit
GTACACACCGCCCGTCTCTACTACCGATTGAATGTCATAGTGAGGTCCTC3980.2639414819186821No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG3570.23675153026374252No Hit
GTACACACCGCCCGTCTCACCTACCGATTGAATGGTCCGGTGAGGCCTCG3370.22348813921255245No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTTCT2650.17573993142826827No Hit
GTACACACCGCCCGTCGCTACTACCGATCGGATGGTTTAGTGAGACCCTC2620.17375042277058975No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATGTTC2600.17242408366547074No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGAATTTC2570.17043457500779224No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAACCCTCG2340.15518167529892368No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC2270.15053948843100715No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTTGGTGAAATATTG2130.1412551146951741No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAAGCCTCG2120.1405919451426146No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAAATGTGA2060.1366129278272576No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC1860.12334953677606755No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG1820.12069685856582951No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC1760.1167178412504725No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTTG1710.113401993487675No Hit
GTACACACCGCCCGTCGCTCCTAGCGATTTCGAGTGGTCCGGTGAATCTT1700.1127388239351155No Hit
GTACACACCGCCCGTCTCTACTACCGATTGAACGTTTTAGTGAGGTCCTC1680.11141248482999648No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTGCAC1540.10212811109416345No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)