FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5o_S116_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5o_S116_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110248
Total Bases33.1 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG1760015.964008417386255No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC72356.56247732385168No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG71096.448189536318119No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGTTATC56815.152927944271098No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC19481.7669254771061607No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT16621.507510340323634No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGTTTTAGTGAGGTCCTC15751.4285973441695088No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC12961.1755315289166244No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT9900.8979754734779769No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT9710.8807416007546621No Hit
GTACACACCGCCCGTCGCAGCTACTGATTGAATACATCGGTGAAATATTG9510.8626006820985416No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT9110.8263188447862999No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTTGGTGAAATATTG8420.7637326754226834No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG7590.6884478629997823No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTTG7410.6721210362092735No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC6720.609534866845657No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT5890.534250054422756No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC5120.46440751759669113No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATCCTC3190.2893476525651259No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC2810.25487990711849645No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATCATTCGGTGAGGATCTC2520.2285755750671214No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG2490.2258544372687033No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAATCTTT2350.21315579420941874No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA2280.20680647267977648No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAATCTTC2270.20589942674697045No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGACCCAC2250.20408533488135838No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTTCT2230.20227124301574634No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG2210.20045715115013424No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC2050.18594441622523766No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC2030.18413032435962556No Hit
GGTACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC2010.1823162324940135No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG2000.18140918656120744No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC1900.17233872723314708No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1870.16961758943472896No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1850.16780349756911692No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGTTGGTGAGGAGCTC1830.16598940570350482No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTGGAC1830.16598940570350482No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1800.1632682679050867No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC1740.15782599230825048No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGATTTAGTGAGGTCTTG1700.15419780857702634No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA1690.1532907626442203No Hit
GGTACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1670.1514766707786082No Hit
GTACACACCGCCCGTCGTTTCTTCCGACTGATACTCATTGTGAGTTGCAA1660.1505696248458022No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATCATTCGGTGAGGATTCC1630.14784848704738407No Hit
GGTACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1630.14784848704738407No Hit
GTACACACCGCCCGTCTCACCTACCGATTGAATGGTCCGGTGAAGCCTCG1590.14422030331615993No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1590.14422030331615993No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1560.1414991655177418No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTCGGTGAAGAATCT1540.13968507365212973No Hit
GGTACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1510.13696393585371164No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1490.13514984398809957No Hit
GGTACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1450.13152166025687542No Hit
GGAACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1430.12970756839126332No Hit
GGTACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1410.12789347652565128No Hit
GGTACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1400.12698643059284523No Hit
GGAACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1390.12607938466003918No Hit
GGAACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1380.12517233872723316No Hit
GGAACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1360.12335824686162107No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGTCTTC1350.12245120092881503No Hit
GGTACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1340.12154415499600899No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG1340.12154415499600899No Hit
GGTACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1330.12063710906320296No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1320.11973006313039693No Hit
GGAACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1320.11973006313039693No Hit
GGAACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1310.11882301719759089No Hit
GGAACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1300.11791597126478484No Hit
GGTACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1290.11700892533197882No Hit
GGTACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1290.11700892533197882No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGTTCCTC1270.11519483346636673No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGGGAGCTCTCT1260.1142877875335607No Hit
GGTACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1260.1142877875335607No Hit
GGTACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1250.11338074160075468No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTGCGGTGAAATCTTT1250.11338074160075468No Hit
GGAACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1240.11247369566794861No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGCATTT1240.11247369566794861No Hit
GGTACTGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1230.11156664973514259No Hit
GGTACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1230.11156664973514259No Hit
GGTACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1230.11156664973514259No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT1220.11065960380233655No Hit
GGTACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1220.11065960380233655No Hit
GGTACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1200.10884551193672447No Hit
GGAACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC1190.10793846600391845No Hit
GGTACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1180.10703142007111241No Hit
GGTACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1180.10703142007111241No Hit
GGTACAGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1170.10612437413830636No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1160.10521732820550032No Hit
GGTACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1150.1043102822726943No Hit
GGAACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1150.1043102822726943No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAAGCCTCG1150.1043102822726943No Hit
GGAACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1140.10340323633988824No Hit
GGAACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1140.10340323633988824No Hit
GGTACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1130.10249619040708222No Hit
GGTACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1130.10249619040708222No Hit
GGAACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1110.10068209854147013No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)