FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5n_S115_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5n_S115_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110863
Total Bases33.3 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC55

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG93258.411282393584875No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC76226.875152214895862No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG55845.036847279976186No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCCTC38073.4339680506571173No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT36393.282429665442934No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT21801.9663909509935689No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC20961.8906217583864768No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT19871.7923022108367985No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC18851.7002967626710446No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT14621.318744757042476No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT13951.258309805796343No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC12711.1464600452811127No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG12211.1013593353959392No Hit
GTACACACCGCCCGTCGCTACTACCGATGGATGATTTGGTGAGGTCGCCT10640.959743106356494No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT10080.9092303112850997No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC8680.7829483236066135No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGATGAAGCCTCG7780.7017670458133011No Hit
GTACACACCGCCCGTCGCTACTACAGATTGAATGATTTAGTGAGGTCCTC7230.6521562649396102No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA6570.592623327891181No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC6290.5673669303554838No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTAAATGCTGT5680.512344064295572No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTTCT5250.47355745379432274No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAAGCTT5200.4690473828058053No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAATCTTT5190.46814536860810185No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATCCTC4950.44649702786321854No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGGGATTCGGTGAACTTTCT4860.4383789000838873No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC4730.4266527155137422No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATTTCC4640.418534587734411No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAAGCCTCG4400.3968862469895276No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC4180.37704193464005126No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC3930.3544915796974644No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCC3910.3526875513020575No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG3680.33194122475487764No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG3590.3238230969755464No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT3530.31841101178932557No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCCT3470.3129989266031047No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT3400.30668482721918044No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG3160.2850364864742971No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC3080.2778203728926693No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTTGGTGAAATATTG2950.2660941883225242No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAGGGCCTC2900.2615841173340068No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGTTGGTGAGGAGCTC2890.26068210313630336No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT2720.24534786177534432No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGATTAGTGAGATCCCC2490.22460153522816448No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGGTGTACCAGTGAGATCTTT2470.22279750683275754No Hit
GTACACACCGCCCGTCGCTCCTACCGATTCAATGAATCGATGAACTGGAT2390.21558139325112977No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAGGCCTCG2310.208365279669502No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTTATCCGGTGAATAATTC2250.20295319448328117No Hit
GTACACACCGCCCGTCGCAGCTACTGATTGAATACATCGGTGAAATATTG2190.1975411092970603No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTTG1920.1731867259590666No Hit
GTACACACCGCCCGTCGCTACTACCGATTTAATGTTTTAGTGAGGTCCTC1910.17228471176136312No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC1820.16416658398203188No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGACCCAC1800.16236255558662493No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGGAGTCG1780.160558527191218No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGCTATTC1780.160558527191218No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG1770.15965651299351452No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGCTCAGGTGAATAGTAT1660.14973435681877634No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC1610.14522428583025895No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTGGAC1560.1407142148417416No Hit
GTACACACCGCCCGTCACACCATGGGAGTTGGTTCTACCCGACGACGCTG1550.13981220064403813No Hit
GTACACACCGCCCGTCTCACCTACCGATTGAATGGTCCGGTGAGGCCTCG1490.1344001154578173No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGATTTAGTGAGGTCTTG1450.1307920586670034No Hit
GTACACACCGCCCGTCTCTACTACCGATTGAATGTTTTAGTGAGGTCCTC1440.12989004446929994No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGTCCTCG1380.12447795928307911No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTTC1370.12357594508537563No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAGGACTCG1300.11726184570145133No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGCCTCC1300.11726184570145133No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAGTTGTAG1290.11635983150374786No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAACCCTCG1270.11455580310834092No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC1190.10733968952671316No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGAATTTC1160.10463364693360275No Hit
GTACACACCGCCCGTCTCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT1140.1028296185381958No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATTTC1130.10192760434049233No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA1130.10192760434049233No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)