FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5g_S97_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5g_S97_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107782
Total Bases32.4 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9420.8739863799150137No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG7170.6652316713365868No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG6150.5705962034476999No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5600.5195672746840846No Hit
TAGACTTCGGGGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG5580.5177116772744985No Hit
TAGACTTCGGGGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG5530.5130726837505335No Hit
TAGACTTCGGGATGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG5260.4880221187211223No Hit
TAGACCTCGGGGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG4820.44719897571022993No Hit
TAGACCTCGGGGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG4390.40730363140413056No Hit
TAGACCTCGGGATGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG4250.3943144495370285No Hit
TAGACTTCGGGGTGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG4160.3859642611938914No Hit
TAGACTTCGGGATGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG3890.36091369616448016No Hit
TAGACTTCGGGATGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG3880.3599858974596872No Hit
TAGACTTCGGGGTGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG3650.33864652724944794No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAAAAGATGTTGGTAGAGTACTGG3410.3163793583344158No Hit
TAGACCTCGGGATGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG3390.31452376092482975No Hit
TAGACCTCGGGGTGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG3360.3117403648104507No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG3130.29040099460021157No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAAAAGATGTTGGTAGAGTACTGG2960.2746284166187304No Hit
TAGACTTCGGGGTGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG2940.27277281920914437No Hit
TAGACTTCGGGATGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG2870.26627822827559333No Hit
TAGACCTCGGGGTGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG2850.2644226308660073No Hit
TAGACCTCGGGATGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG2770.25700024122766324No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAAAAGATGTTGGTAGAGTACTGG2750.2551446438180772No Hit
TAGACTTCGGGGTGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG2730.25328904640849126No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG2610.2421554619509751No Hit
TAGACTTCGGGATGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG2570.23844426713180308No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG2560.23751646842701005No Hit
TAGACCTCGGGGTGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG2510.23287747490304506No Hit
TAGACCTCGGGATGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG2450.227310682674287No Hit
TAGACCTCGGGGTGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG2390.22174389044552892No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAAAAGATGTTGGTAGAGTACTGG2350.2180326956263569No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAAAAGATGTTGGTAGAGTACTGG2260.20968250728321983No Hit
TAGACTTCGGTGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG2250.20875470857842682No Hit
TAGACTTCGGGATGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG2220.2059713124640478No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG2170.20133231894008274No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAAAAGATGTTGGTAGAGTACTGG2060.19112653318735967No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG2020.18741533836818763No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG2010.18648753966339465No Hit
TAGACTTCGGGATGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG2000.18555974095860162No Hit
TAGACCTCGGGGTGGCCAAAGAATCAGAAAAGATGTTGGTAGAGTACTGG1970.1827763448442226No Hit
TAGACTTCGGGATGGCCGAAAAATCAGAAAAGATGTTGGTAGAGTACTGG1960.18184854613942958No Hit
TAGACTTCGGTGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG1920.17813735132025757No Hit
TAGACCTCGGGATGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG1910.17720955261546456No Hit
TAGACTTCGGGATGGCCAAAGAATCAGAAAAGATGTTGGTAGAGTACTGG1880.1744261565010855No Hit
TAGACTTCGGGGTGGCCAAAAAACCAAAATAAATGTTGGTATAACACTGG1860.1725705590914995No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAGATGCTGGTATAAAACAGG1860.1725705590914995No Hit
TAGACCTCGGTGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG1830.1697871629771205No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1790.16607596815794845No Hit
TAGACTTCGGGGTGGCCAAAAAATCAGAAAAGATGTTGGTAGAGTACTGG1770.16422037074836243No Hit
TAGACCTCGGGGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG1750.1623647733387764No Hit
TAGACTTCGGGATGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG1710.15865357851960438No Hit
TAGACCTCGGGGTGGCCAAAAAACCAAAATAAATGTTGGTATAACACTGG1710.15865357851960438No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG1700.1577257798148114No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1680.15587018240522535No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAAAAGATGTTGGTAGAGTACTGG1670.15494238370043237No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAAAAGATGTTGGTAGAGTACTGG1670.15494238370043237No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG1660.15401458499563933No Hit
TAGACCTCGGGATGGCCGAAAAATCAGAAAAGATGTTGGTAGAGTACTGG1650.15308678629084635No Hit
TAGACCTCGGGATGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG1630.15123118888126033No Hit
TAGACTTCGGTGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG1620.15030339017646732No Hit
TAGACTTCGGGATGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG1610.1493755914716743No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAAGAGATGTTGGTAGAGTACTGG1610.1493755914716743No Hit
TAGACCTCGGGGTGGCCGAAGAACCAGAAAAGATGTTGGTAGAGTACTGG1560.14473659794770927No Hit
TAGACCTCGGTGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG1530.14195320183333024No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1530.14195320183333024No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAAGAGATGTTGGTAGAGTACTGG1500.13916980571895124No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1500.13916980571895124No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAAAAGATGCTGGTAAAGCACTGG1480.1373142083093652No Hit
TAGACTTCGGGGTGGCCGAAAAACCAGAAAAGATGTTGGTAGAGTACTGG1480.1373142083093652No Hit
TAGACCTCGGTGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG1480.1373142083093652No Hit
TAGACCTCGGGATGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG1470.13638640960457218No Hit
TAGACTTCGGGGTGGCCAAAAAATCAGAATAAATGTTGGTATAAAACTGG1430.13267521478540018No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAAGAGATGTTGGTAGAGTACTGG1420.13174741608060714No Hit
TAGACCTCGGGGTGGCCAAAAAATCAGAATAAATGTTGGTATAAAACTGG1380.12803622126143513No Hit
TAGACCTCGGGATGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG1380.12803622126143513No Hit
TAGACTTCGGGATGGCCAAAAAACCAAAATAAATGTTGGTATAACACTGG1350.1252528251470561No Hit
TAGACTTCGGGGTGGCCGAAAAACCAGAATAAATGTTGGTATAAAACTGG1350.1252528251470561No Hit
TAGACTTCGGTGTGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG1350.1252528251470561No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAATAGATGCTGGTATAAAACAGG1330.12339722773747007No Hit
TAGACTTCGGGGTGGCCAAAGAACCAGAAAAGATGTTGGTAGAGTACTGG1320.12246942903267707No Hit
TAGACCTCGGGGTGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG1320.12246942903267707No Hit
TAGACTTCGGTGTGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG1320.12246942903267707No Hit
TAGACCTCGGGGTGGCCAAAAAATCAGAAAAGATGTTGGTAGAGTACTGG1300.12061383162309107No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAGATATGTTGGAATAAGATTGG1280.11875823421350502No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAAGATATGTTGGAATAAGATTGG1280.11875823421350502No Hit
TAGACTTCGGGATGGCCGAAGAACCAGAAAAGATGTTGGTAGAGTACTGG1270.11783043550871203No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAAGAGATGTTGGTAGAGTACTGG1260.11690263680391902No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1260.11690263680391902No Hit
TAGACTTCGGGATGGCCAAAAAATCAGAAAAGATGTTGGTAGAGTACTGG1250.11597483809912602No Hit
TAGACTTCGGTATGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG1240.115047039394333No Hit
TAGACTTCGGGGTGGCCGAAAAATCAAAATAGATGCTGGTATAAAACAGG1210.11226364327995399No Hit
TAGACTTCGGGATGGCCGAAGAATCAAAATAGATGCTGGTATAAAACAGG1200.11133584457516098No Hit
TAGACCTCGGGATGGCCAAAGAATCAGAAAAGATGTTGGTAGAGTACTGG1190.11040804587036795No Hit
TAGACCTCGGGATGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG1170.10855244846078194No Hit
TAGACTTCGGGATGGCCGAAAAATCAAAATAGATGCTGGTATAAAACAGG1160.10762464975598894No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAAGAGATGTTGGTAGAGTACTGG1140.10576905234640294No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAAAGATGCTGGTATAAAATAGG1130.10484125364160991No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAAAAGATGCTGGTAAAGCACTGG1130.10484125364160991No Hit
TAGACCTCGGGGTGGCCGAAAAATCAAAATAGATGCTGGTATAAAACAGG1120.10391345493681692No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAAAGGTGTTGGTAGAGTACTGG1110.1029856562320239No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAAAAGATGCTGGTAAAGCACTGG1100.1020578575272309No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAAAAGGTGTTGGTAGAGTACTGG1100.1020578575272309No Hit
TAGACTTCGGGGTGGCCGAAAAATCAAAAGATATGTTGGAATAAGATTGG1100.1020578575272309No Hit
TAGACTTCGGGATGGCCGAAAAATCAGAAAAGATGCTGGTAAAGCACTGG1090.10113005882243789No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAAGAGATGTTGGTAGAGTACTGG1090.10113005882243789No Hit
TAGACCTCGGGGTGGCCAAAGAATCAGAAAAGATGCTGGTAAAGCACTGG1080.10020226011764487No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)