FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5g_S97_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5g_S97_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107782
Total Bases32.4 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC2360.21896049433114992No Hit
GGTACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC2350.2180326956263569No Hit
GGTACTGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC2330.21617709821677092No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC2330.21617709821677092No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC2330.21617709821677092No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC2310.21432150080718487No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC2170.20133231894008274No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC2120.1966933254161177No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC2070.19205433189215268No Hit
GGTACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC2020.18741533836818763No Hit
GGTACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1990.1846319422538086No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1990.1846319422538086No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1930.17906515002505055No Hit
GGAACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1890.17535395520587854No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1850.1716427603867065No Hit
GGAACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1840.1707149616819135No Hit
GGTACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1830.1697871629771205No Hit
GGTACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1800.16700376686274146No Hit
GGTACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1780.16514816945315544No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1770.16422037074836243No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1750.1623647733387764No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1750.1623647733387764No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1730.1605091759291904No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1720.1595813772243974No Hit
GGTACTGGATGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1700.1577257798148114No Hit
GGAACTGGATGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1690.15679798111001836No Hit
GGTACTGGTTGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1680.15587018240522535No Hit
GGTACAGGTTGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1670.15494238370043237No Hit
GGAACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1670.15494238370043237No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1670.15494238370043237No Hit
GGAACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1670.15494238370043237No Hit
GGTACAGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1660.15401458499563933No Hit
GGAACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1650.15308678629084635No Hit
GGAACTGGTTGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1640.1521589875860533No Hit
GGTACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1630.15123118888126033No Hit
GGTACAGGATGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1630.15123118888126033No Hit
GGTACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1600.1484477927668813No Hit
GGTACTGGTTGAACTGTATATCCCCCATTATCTAGTGGTAATTCTCATTC1580.14659219535729529No Hit
GGTACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1570.14566439665250228No Hit
GGTACTGGTTGAACAGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1570.14566439665250228No Hit
GGTACAGGTTGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1560.14473659794770927No Hit
GGTACTGGATGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1560.14473659794770927No Hit
GGTACAGGTTGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1560.14473659794770927No Hit
GGTACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1520.14102540312853723No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1520.14102540312853723No Hit
GGAACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1510.14009760442374422No Hit
GGTACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1510.14009760442374422No Hit
GGTACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1500.13916980571895124No Hit
GGAACAGGATGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1500.13916980571895124No Hit
GGTACTGGTTGAACAGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1490.1382420070141582No Hit
GGAACTGGTTGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1490.1382420070141582No Hit
GGAACAGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1480.1373142083093652No Hit
GGTACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1470.13638640960457218No Hit
GGTACAGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1440.13360301349019316No Hit
GGTACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1430.13267521478540018No Hit
GGTACAGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1410.13081961737581416No Hit
GGTACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1410.13081961737581416No Hit
GGTACTGGATGAACAGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1400.12989181867102115No Hit
GGAACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1400.12989181867102115No Hit
GGTACTGGATGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1390.1289640199662281No Hit
GGTACAGGTTGAACAGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1390.1289640199662281No Hit
GGAACTGGTTGAACTGTATATCCCCCATTATCTAGTGGTAATTCTCATTC1390.1289640199662281No Hit
GGAACAGGTTGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1390.1289640199662281No Hit
GGTACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1380.12803622126143513No Hit
GGTACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1380.12803622126143513No Hit
GGAACAGGTTGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1350.1252528251470561No Hit
GGAACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1350.1252528251470561No Hit
GGTACAGGATGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1350.1252528251470561No Hit
GGAACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1350.1252528251470561No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1340.12432502644226309No Hit
GGTACTGGATGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1330.12339722773747007No Hit
GGAACAGGTTGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1330.12339722773747007No Hit
GGAACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1320.12246942903267707No Hit
GGTACAGGTTGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1320.12246942903267707No Hit
GGAACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1320.12246942903267707No Hit
GGTACAGGTTGAACAGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1310.12154163032788406No Hit
GGAACTGGTTGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1310.12154163032788406No Hit
GGTACTGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1300.12061383162309107No Hit
GGTACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1300.12061383162309107No Hit
GGAACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1290.11968603291829805No Hit
GGAACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1290.11968603291829805No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1280.11875823421350502No Hit
GGTACTGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1280.11875823421350502No Hit
GGTACTGGTTGAACAGTATATCCCCCATTGTCTAGTATCACAGCACACTC1280.11875823421350502No Hit
GGAACTGGTTGAACAGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1270.11783043550871203No Hit
GGTACAGGATGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1270.11783043550871203No Hit
GGTACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1260.11690263680391902No Hit
GGTACAGGTTGAACTGTATATCCCCCATTATCTAGTGGTAATTCTCATTC1260.11690263680391902No Hit
GGTACTGGTTGAACTGTATACCCCCCATTATCTAGTGGTAATTCTCATTC1260.11690263680391902No Hit
GGTACAGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1250.11597483809912602No Hit
GGAACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1240.115047039394333No Hit
GGTACTGGATGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1240.115047039394333No Hit
GGAACTGGATGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1240.115047039394333No Hit
GGTACTGGATGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1230.11411924068954No Hit
GGAACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1220.11319144198474698No Hit
GGTACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1220.11319144198474698No Hit
GGTACTGGATGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1210.11226364327995399No Hit
GGAACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1200.11133584457516098No Hit
GGTACAGGTTGAACAGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC1200.11133584457516098No Hit
GGTACTGGATGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1200.11133584457516098No Hit
GGAACAGGATGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1190.11040804587036795No Hit
GGTACTGGATGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1190.11040804587036795No Hit
GGAACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC1190.11040804587036795No Hit
GGAACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1190.11040804587036795No Hit
GGTACAGGTTGAACAGTATATCCCCCATTATCTAGTGGTAATTCTCATTC1180.10948024716557496No Hit
GGAACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1180.10948024716557496No Hit
GGTACTGGTTGAACTGTATACCCCCCATTGTCTAGTATCACAGCACACTC1170.10855244846078194No Hit
GGAACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC1170.10855244846078194No Hit
GGAACAGGTTGAACAGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1160.10762464975598894No Hit
GGTACTGGTTGAACTGTATACCCTCCATTATCTAGTGGTAATTCTCATTC1160.10762464975598894No Hit
GGAACAGGTTGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1160.10762464975598894No Hit
GGTACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC1150.10669685105119593No Hit
GGAACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1150.10669685105119593No Hit
GGAACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1150.10669685105119593No Hit
GGAACTGGATGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1150.10669685105119593No Hit
GGAACTGGATGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC1140.10576905234640294No Hit
GGTACAGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1140.10576905234640294No Hit
GGTACAGGATGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1140.10576905234640294No Hit
GGTACAGGATGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1130.10484125364160991No Hit
GGAACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC1130.10484125364160991No Hit
GGAACTGGTTGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1120.10391345493681692No Hit
GGTACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1120.10391345493681692No Hit
GGTACTGGTTGAACAGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC1120.10391345493681692No Hit
GGAACAGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1120.10391345493681692No Hit
GGAACTGGTTGAACAGTATATCCTCCATTATCTAGTGGTAATTCTCATTC1120.10391345493681692No Hit
GGTACAGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1120.10391345493681692No Hit
GGTACTGGATGAACTGTATATCCCCCATTATCTAGTGGTAATTCTCATTC1110.1029856562320239No Hit
GGAACAGGTTGAACTGTATACCCTCCATTATCTAGTGGTAATTCTCATTC1110.1029856562320239No Hit
GGAACAGGATGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC1100.1020578575272309No Hit
GGAACTGGTTGAACAGTATATCCCCCATTGTCTAGTATCACAGCACACTC1090.10113005882243789No Hit
GGTACTGGTTGAACTGTTTATCCTCCTTTATCCGGACCACAAATGCACTC1090.10113005882243789No Hit
GGAACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1090.10113005882243789No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)