FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5ff_S137_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5ff_S137_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424471
Total Bases127.7 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG4484810.56562167969072No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC128673.0313024918074496No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC121812.869689566542826No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT111952.6374004348942566No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG105312.4809704314311225No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC82751.9494853594238477No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCCTC82211.9367636422747372No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT81941.930402783700182No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC80731.9018967137919907No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC72781.714604766874533No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGATTTAGTGAGGACTTC63021.4846715087720952No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGACCTCC58991.389729804862994No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATTTCC50401.1873602672502952No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT45551.0731004002629154No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT42591.003366543297422No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAATGCTCG40020.9428205931618414No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG39120.9216177312466576No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC38100.897587821076116No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT32160.7576489324359026No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT30060.7081755879671403No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTTCGGTGAACCTTTT22270.5246530387234936No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC21850.514758369829741No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTCCTC20500.48295407695696524No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGCATTT20070.4728238207085997No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTGGTCCGGTGAACCTT18760.4419618772542765No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAAATTGAT18450.4346586692612687No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGTCTCC17850.4205234279844795No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA17260.40662377406230343No Hit
GTACACACCGCCCGTCGCTACTTCCGATTTCGAGTGGTCCGGTGAGCCTT17090.4026187890338798No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA16320.384478562728667No Hit
GTACACACCGCCCGTCGCTCCTACCGACTGAGTGATCCGGTGAATAATTC15170.3573860169481543No Hit
GTACACACCGCCCGTCGCTCCTACCGATGAATGGTCCGGTGAGGACTTAG14650.34513547450827026No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAGGCCTCG14530.34230842625291247No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT14050.33100023323148103No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAACGATTCGGTGAAATCTCG12830.30225857596867634No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC12640.29778241623102636No Hit
GTACACACCGCCCGTCGCACCAACTGATTGAATGGTTCGGTGAAAAATTG12390.2918927323656975No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC11610.2735169187058715No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC11350.26739164748592953No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTGGAC10540.24830907176226408No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG8900.20967274560570684No Hit
GTACACACCGCCCGTCTCACCTACCGATTGAATGGTCCGGTGAGGCCTCG8570.20189836290347277No Hit
GTACACACCGCCCGTCGCATCTACCGATTGAATGGCCCGGTGAAGACCTG8150.19200369400972034No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGACCTTG7870.185407248080552No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGCTTTTT6960.16396879881075505No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGTTGGTGAGGAGCTC6720.15831470230003936No Hit
GTACACACCGCCCGTCAAACCAACCGAGTTATGAAGGGATGAAGCTCTTT6390.15054031959780528No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT6190.14582857250554218No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATAGTTTAGTGAGGCACTT5250.12368336117190575No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGTCTT5190.12226983704422681No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGGCCTCC5180.12203424968961366No Hit
GTACACACCGCCCGTCGCTGCCTCCGATTGAGTGATCCGGTGAATAATTC4590.10813459576743759No Hit
GTACACACCGCCCGTCGCTACTACCGATGGATGATTTGGTGAGGTCGCCT4560.10742783370359812No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGTTGAATCTT4550.10719224634898497No Hit
GTACACACCGCCCGTCTCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT4450.10483637280285342No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)