FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site5bb_S133_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site5bb_S133_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences381082
Total Bases114.7 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG5286713.872867256915836No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC4551911.944673324901203No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG288457.569237067087924No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC54671.4345993775617845No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT45381.1908198235550354No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG36640.961472858859773No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT35470.9307708052335193No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT31200.8187214300334311No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC27650.7255656262956529No Hit
GTACACACCGCCCGTCGCAGCTACTGATTGAATACATCGGTGAAATATTG26520.6959132155284165No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGGTGTACCAGTGAGAGCCTT26350.6914522333775932No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA22980.6030198225053925No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT19740.5179987509249978No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTTGGTGAAATATTG16460.4319280364855858No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT15670.4111975900199957No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG12260.32171553628877775No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC11770.30885741126581684No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTTG11670.30623330411827376No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC11480.30124750053794197No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTTCT10760.282353929075632No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGACCCAC10280.2697582147674254No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC9900.25978660760676175No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC9650.2532263397379042No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA8550.22436116111493065No Hit
GGTACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC8370.21963776824935316No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAATCTTC8100.21255267895098692No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG7950.20861651822967234No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAACCCTCG7650.20074419678704322No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC7400.1941839289181856No Hit
GTACACACCGCCCGTCGTTTCTTCCGACTGATACTCATTGTGAGTTGCAA7260.19051017891162533No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC7160.18788607176408226No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC7160.18788607176408226No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAATCTTT6860.18001375032145314No Hit
GGTACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC6710.17607758960013856No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC6660.17476553602636702No Hit
GGTACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC6530.17135419673456107No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC6410.1682052681575094No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC6410.1682052681575094No Hit
GGTACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC6020.15797125028209152No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC5950.15613437527881138No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5910.15508473241979417No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC5750.1508861609837253No Hit
GGTACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC5730.15036133955421668No Hit
GGTACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC5710.14983651812470808No Hit
GGTACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC5710.14983651812470808No Hit
GGTACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC5670.14878687526569084No Hit
GGTACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5660.14852446455093654No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT5650.14826205383618224No Hit
GGTACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5570.1461627681181478No Hit
GGTACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC5510.14458830382962198No Hit
GGAACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5460.14327625025585045No Hit
GGTACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC5460.14327625025585045No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTGGAC5430.14248901811158754No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATCATTCGGTGAGGATCTC5400.14170178596732463No Hit
GGAACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC5390.1414393752525703No Hit
GGAACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5180.1359287502427299No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGTCTTC5130.1346166966689584No Hit
GGTACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC5080.13330464309518686No Hit
GGAACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC5060.13277982166567825No Hit
GGTACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC5040.13225500023616965No Hit
GGAACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC5010.13146776809190672No Hit
GGAACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC4990.1309429466623981No Hit
GGTACTGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4980.1306805359476438No Hit
GGTACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4970.1304181252328895No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGATTTAGTGAGGTCTTG4960.1301557145181352No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGTTCCTC4960.1301557145181352No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGAATTTC4860.12753160737059216No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4840.12700678594108353No Hit
GGAACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4830.12674437522632925No Hit
GGAACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4790.12569473236731202No Hit
GGTACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC4730.12412026807878619No Hit
GGTACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4720.12385785736403188No Hit
GGTACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4710.12359544664927759No Hit
GGTACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC4700.12333303593452327No Hit
GGAACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4670.12254580379026037No Hit
GGAACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC4610.12097133950173453No Hit
GGTACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4580.12018410735747162No Hit
GGTACAGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC4560.11965928592796302No Hit
GGAACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC4550.1193968752132087No Hit
GGTACTGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4540.11913446449845441No Hit
GGTACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC4520.11860964306894578No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGTCATC4520.11860964306894578No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATCATTCGGTGAGGATTCC4510.11834723235419149No Hit
GGAACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC4480.11756000020992857No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG4480.11756000020992857No Hit
GGTACTGGATGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC4450.11677276806566567No Hit
GGAACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4440.11651035735091135No Hit
GGAACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC4420.11598553592140275No Hit
GGAACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4260.11178696448533386No Hit
GGAACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC4250.11152455377057957No Hit
GGTACTGGTTGAACAGTATATCCCCCATTGTCTAGTATCACAGCACACTC4250.11152455377057957No Hit
GGTACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC4250.11152455377057957No Hit
GGAACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4200.11021250019680805No Hit
GGTACAGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC4200.11021250019680805No Hit
GGTACTGGATGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC4190.10995008948205373No Hit
GGTACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4170.10942526805254513No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGCATTT4170.10942526805254513No Hit
GTACACACCGCCCGTCGCACCAACCGATTGAATGGTTCGGTGAAGAATCT4140.10863803590828222No Hit
GGAACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4120.10811321447877359No Hit
GGTACAGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC4110.1078508037640193No Hit
GGTACTGGTTGAACTGTATACCCCCCATTGTCTAGTATCACAGCACACTC4100.10758839304926499No Hit
GGAACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC4070.10680116090500207No Hit
GGTACAGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4070.10680116090500207No Hit
GGAACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC4010.10522669661647624No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAAATGTGA4000.10496428590172195No Hit
GGTACAGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC4000.10496428590172195No Hit
GGAACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC3950.10365223232795041No Hit
GGAACAGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC3910.1026025894689332No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC3890.10207776803942457No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAGTTGTAG3880.10181535732467029No Hit
GGAACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC3850.10102812518040737No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)