FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1s_S112_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1s_S112_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences201215
Total Bases60.5 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC52

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG148447.377183609571851No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC109655.44939492582561No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC81284.039460278806252No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT78713.911736202569391No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC64983.2293815073428918No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG53082.6379743060905No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC42002.0873195338319706No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT40041.989911288919812No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC38631.9198369902840247No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG33541.6668737420172453No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT31891.5848719031881322No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT24631.2240638123400345No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC19210.9547001963074323No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTGGTCCGGTGAACCTT17490.8692194915885992No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGTTGAATCTT16360.8130606565116916No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC15580.7742961508833834No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT15070.7489501279725667No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC14110.7012399671992644No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT13760.6838456377506648No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC13210.6565116914742937No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG11830.5879283353626719No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC10830.5382302512238153No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGACGTTTTAGTGAGACATTT9720.4830653778296847No Hit
GTACACACCGCCCGTCGCATCTACCGATTGAATGGCCCGGTGAAGACCTG8320.41348806003528565No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC8080.4015605198419601No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAATCTT7160.35583828243421217No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG6580.32701339363367543No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGCATTT6520.324031508585344No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAATAATTT4790.23805382302512237No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGCTC4500.22364137862485403No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGCAATCCGGTGAATATTTC4050.2012772407623686No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATGTTC4000.19879233655542577No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC4000.19879233655542577No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGTTGGTGAGGAGCTC3990.19829535571403725No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGTTCCGGTGAATAATTC3900.19382252814154013No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCCT3860.19183460477598588No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTCAGTGAGATAATC3840.19084064309320875No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC3570.1774221603757175No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCC3570.1774221603757175No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAAGCTT3550.17642819869294038No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTTCGGTGAACTTTTT3530.17543423701016325No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT3440.1709614094376662No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCGAG3400.1689734860721119No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT3240.1610217926098949No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGCTATTC3030.15058519494073502No Hit
GTACACACCGCCCGTCGCTACTTCCGATTTCGAGTGGTCCGGTGAGCCTT3000.14909425241656935No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAAGCTT2830.14064557811296374No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGATTCGGTGAACCAT2440.12126332529880973No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA2430.12076634445742117No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG2370.11778445940908977No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGACCCTC2360.11728747856770122No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGAATTTC2350.11679049772631266No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG2290.11380861267798127No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGATCCGGTGAACCAT2180.10834182342270705No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTT2100.10436597669159853No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGCATTAGGGTGAAATCTTC2030.1008871108018786No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)