FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1n_S103_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1n_S103_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241568
Total Bases72.7 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC53

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG166516.8928831633328915No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT118174.891790303351437No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC106964.427738773347463No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT106494.408282553980659No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC104034.306447873890582No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCCTC84933.5157802357928203No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTCCTC82683.4226387601006754No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC65302.7031726056431316No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC49282.040005298715062No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG38871.6090707378460725No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT37821.5656047158564046No Hit
GTACACACCGCCCGTCGCTACTACCGATGGATGATTTGGTGAGGTCGCCT35611.4741190886210094No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTTC33221.3751821433302425No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC23720.9819181348522983No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGCTTAATGAGATCTCT23080.9554245595443106No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT18950.7844582063849517No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGGGTGGTCCGGTGAACCCT14890.616389588024904No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC14780.6118360047688436No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCCT14330.5932077096304146No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT13180.545602066498874No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTGGTCCGGTGAACCTT12280.5083454762220161No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGTTGAATCTT11830.4897171810835872No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAGACCCTC11510.47647039342959335No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAACTTTTT11440.47357265863028214No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT11080.45867002251953903No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC10550.4367300304676116No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAATCTT10000.4139621141873096No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTACTT9710.4019572128758776No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGACCCTC9150.3787753344813883No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC8730.3613889256855213No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC7940.3286859186647238No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATTTACTAGTGAGACAATA7900.3270300702079746No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA7440.3079878129553583No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG6650.2752848059345609No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT6590.272801033249437No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGACGTTTTAGTGAGACATTT6570.2719731090210624No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG6360.2632799046231289No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTCC6270.2595542455954431No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGTTTAGTGAGGCTCAC6130.2537587759968208No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT5980.24754934428401115No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC5810.2405119883428269No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT5360.22188369320439794No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC5300.21939992051927407No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAAGCTT4890.20242747383759438No Hit
GTACACACCGCCCGTCGCACCTAGCGATTGAATGGTCCGGTGAGGCCTCG4710.1949761557822228No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG4580.1895946482977878No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGAGTTT4540.18793879984103856No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATGTTC4040.16724069413167308No Hit
GTACACACCGCCCGTCGCTACCTCCGATAGAATGGCTAAGCGAGGCCGTT3900.16144522453305074No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAGGGCCTC3840.15896145184792687No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCC3750.15523579282024108No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG3620.14985428533580608No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC3250.13453768711087563No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG3090.12791429328387866No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAATAATTT2980.12336071002781825No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAAACTTC2910.12046297522850709No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC2770.11466750562988476No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAGTTTCGA2560.10597430123195126No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGCTC2520.10431845277520202No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAGTTTCGA2450.10142071797589085No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTTCGGTGAACTTTTT2450.10142071797589085No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)