FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1f_S92_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1f_S92_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences295879
Total Bases89 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC59

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG3747212.664636557511685No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC3073710.388368218089152No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC204686.9176927054640585No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT143974.8658404280128025No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT125144.229431625765938No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA122074.125672994703916No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC94883.206716259011285No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC79302.680149655771447No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG73042.468576681684067No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC68462.3137836750833958No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC62662.1177575968554714No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGTTTGGG55361.8710351190858425No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGTTTTAGTGAGGTCCTC54901.8554882232263865No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT52531.7753879119504934No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG35621.2038705011170108No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGTTTAGTGAGGCTCAC30051.0156178708188144No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG29751.0054785909104735No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC25390.8581210562425856No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT21760.7354357693516607No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTGGTCCGGTGAACCTT20690.6992723376785781No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT19810.6695304499474447No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC19070.6445202261735372No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGTTGAATCTT17660.5968656106043349No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT16920.5718553868304274No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCCT16820.5684756268609804No Hit
GTACACACCGCCCGTCGCTACTACCGATGGATGATTTGGTGAGGTCGCCT14350.4849955556156402No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG13640.46099925983256673No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT13460.4549156918875622No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG12240.4136826202603091No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGGTCATC11110.37549133260555834No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC11050.3734634766238902No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC11040.3731255006269455No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT10560.3569026527736No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAATCTT8090.2734225815282599No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGGTGTACCAGTGAGAGCCTT7950.26869091757103414No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAACTTTTT7920.26767698958020003No Hit
GTACACACCGCCCGTCGCTCCTACTGATTGAGTGAACTGGTGAAATCCTT7040.2379351018490667No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGACCCTC6890.23286546189489624No Hit
GTACACACCGCCCGTCGTTGCTACCGATTGGCTGTGGGATAGAGCTTGGG6770.22880974993155986No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC6770.22880974993155986No Hit
GTACACACCGCCCGTCGCACCTACCGATTGGATGGTCCGGTGAGAATTTC6190.20920714210876742No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGGGTGGTCCGGTGAACCCT6160.20819321411793332No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGTCTTC6010.20312357416376292No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCC5970.2017716701759841No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGTTTAGTGAGATCCCC5800.19602607822792423No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG5640.1906184622768091No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATCATTCGGTGAGGATCTC5480.18521084632569393No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGTTCCTC5150.17405763842651895No Hit
GTACACACCGCCCGTCGCTATTGCCGATTGAGTGCTCAGGTGAACCTTCT5060.17101585445401668No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAACGTTCCGGTGAGACCTTT4890.16527026250595683No Hit
GTACACACCGCCCGTCGTTGTTTCCGATGATGGTGGAATGCAGGTGATCG4880.16493228650901212No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTTC4810.16256645453039925No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTTCT4470.15107527063427956No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT4420.14938539064955608No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATGTTC4390.14837146265872198No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTCCGGTGAGGCCTCG4250.14363979870149624No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC4050.13688027876260228No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCTTTG3980.13451444678398938No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGCTGGTGAAGACTTC3840.12978278282676364No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGAGTTT3810.12876885483592956No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAAGCTT3800.12843087883898485No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGCTC3760.12707897485120606No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAAACTTC3730.12606504686037198No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAATAATTT3390.11457386296425229No Hit
GTACACACCGCCCGTCGCTACTTCCGATTTCGAGTGGTCCGGTGAGCCTT3340.1128839829795288No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGATTCGGTGAACCAT3330.1125460069825841No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTCC3250.10984219900702652No Hit
GTACACACCGCCCGTCTCACCTACCGATTGAATGGTCCGGTGAGGCCTCG3150.10646243903757956No Hit
GTACACACCGCCCGTCGCTAGTTCCGATTTCGAGTGGTCCGGTGAACCTT3140.10612446304063484No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTTTAGTGAGATCCTC3070.10375863106202197No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAGTTTCGA3020.10206875107729849No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTTG2980.10071684708951971No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTCAGTGAGATAATC2970.10037887109257501No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)