FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1ee_S142_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1ee_S142_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222756
Total Bases67 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC67

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGACTTCGGGGTGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT44051.977500044892169No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40071.7988292122322183No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT37141.6672951570328072No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT32511.4594444145163317No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT30981.3907593959309739No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT25291.1353229542638583No Hit
TAGACTTCGGGATGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT24881.1169171649697427No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT24331.0922264720142218No Hit
TAGACCTCGGGGTGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT22741.0208479232882615No Hit
TAGACCTCGGGATGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT21980.9867298748406328No Hit
TAGACCTCGGGGTGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT21170.9503672179425021No Hit
TAGACTTCGGGGTGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT19720.8852735728779472No Hit
TAGACTTCGGGATGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT18800.8439727773887123No Hit
TAGACTTCGGGGTGGCCGAAAAACCAGTACCCTGTCTCTTATACACATCT18760.8421770906283108No Hit
TAGACTTCGGGATGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT17960.8062633554202805No Hit
TAGACTTCGGGGTGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT16680.748801379087432No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15740.7066027402179964No Hit
TAGACCTCGGGGTGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT15130.6792185171218733No Hit
TAGACCTCGGGATGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT15120.6787695954317728No Hit
TAGACTTCGGGATGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT14630.6567724326168544No Hit
TAGACCTCGGGATGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT13780.6186140889583222No Hit
TAGACCTCGGGGTGGCCGAAAAACCAGTACCCTGTCTCTTATACACATCT13690.6145737937474187No Hit
TAGACCTCGGGGTGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT12910.5795579019195892No Hit
TAGACCTCGGGATGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT12130.5445420100917596No Hit
TAGACTTCGGGATGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT11510.5167088653055361No Hit
TAGACTTCGGGATGGCCGAAAAACCAGTACCCTGTCTCTTATACACATCT10710.4807951300975058No Hit
TAGACTTCGGGGTGGCCAAAAAACCAGTACCCTGTCTCTTATACACATCT10260.46059365404298874No Hit
TAGACCTCGGGATGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT9350.4197417802438543No Hit
TAGACTTCGGGATGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT9340.41929285855375387No Hit
TAGACTTCGGTGTGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT8770.3937043222180323No Hit
TAGACCTCGGGATGGCCGAAAAACCAGTACCCTGTCTCTTATACACATCT8710.39101079207743No Hit
TAGACCTCGGGATGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT7920.3555459785595001No Hit
TAGACCTCGGGGTGGCCAAAAAACCAGTACCCTGTCTCTTATACACATCT7500.33669126757528417No Hit
TAGACCTCGGTGTGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT7090.31828547828116865No Hit
TAGACTTCGGTGTGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT6830.30661351433855877No Hit
TAGACTTCGGTGTGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT6170.2769846827919338No Hit
TAGACTTCGGGATGGCCAAAAAACCAGTACCCTGTCTCTTATACACATCT5970.2680062489899262No Hit
TAGACTTCGGTGTGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT5390.24196879096410423No Hit
TAGACCTCGGTGTGGCCAAAGAATCAGTACCCTGTCTCTTATACACATCT5020.2253586884303902No Hit
TAGACCTCGGGATGGCCAAAAAACCAGTACCCTGTCTCTTATACACATCT4930.2213183932194868No Hit
TAGACTTCGGTGTGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT4820.21638025462838262No Hit
TAGACCTCGGTGTGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT4510.20246368223527086No Hit
TAGACCTCGGTGTGGCCGAAGAACCAGTACCCTGTCTCTTATACACATCT3960.17777298927975005No Hit
TAGACTTCGGTGTGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT3520.15802043491533335No Hit
TAGACCTCGGTGTGGCCAAAAAATCAGTACCCTGTCTCTTATACACATCT3400.15263337463412882No Hit
TAGACTTCGGTGTGGCCGAAAAACCAGTACCCTGTCTCTTATACACATCT3340.14993984449352657No Hit
TAGACCTCGGTATGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT2970.13332974195981254No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG2960.13288082026971215No Hit
TAGACTTCGGTATGGCCGAAGAATCAGTACCCTGTCTCTTATACACATCT2940.1319829768895114No Hit
TAGACCTCGGTGTGGCCAAAGAACCAGTACCCTGTCTCTTATACACATCT2920.13108513350931064No Hit
TAGACTTCGGTATGGCCGAAAAATCAGTACCCTGTCTCTTATACACATCT2480.11133257914489397No Hit
TAGACTTCGGTGTGGCCAAAAAACCAGTACCCTGTCTCTTATACACATCT2390.10729228393399055No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG2320.10414983210328789No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAATAAATGTTGATATAAAATAGG2230.10010953689238448No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)