FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1a_S83_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1a_S83_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221836
Total Bases66.7 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC58

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGATTCGGTGAAAATCTC144756.525090607475794No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCCTC143466.466939540922123No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG125675.66499576263546No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT124375.606393912620134No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAATAATTC123875.583854739537316No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG85223.8415766602354893No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGTCATAGTGAGGTCCTC84173.7942443967615715No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGATCCTC58382.631673849149822No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATTTCC44351.9992246524459512No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGACTCG39961.8013307127788096No Hit
GTACACACCGCCCGTCACTCCTACCGATTTCGAGTGGTCCGGTGAATCTT36471.6440072846607403No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGCTCAGGTGAGCCATTC35331.5926179700319156No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTGGTCCGGTGAACCTT28411.2806758145657153No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGGGGGTGGGTGAGGCTGCGC28021.2630952595611173No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT24681.1125335833678933No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGACTCG21730.9795524621792676No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATCTTC21360.9628734740979823No Hit
GTACACACCGCCCGTCGCTCCTACCGATCGAGTGTTTAGGTGAATTTGAT21300.9601687733280441No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGTTTCGGTGAAGATTCC20740.934924899475288No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGATTAGTGAGATCCCC20610.9290647144737554No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGTTC18990.8560377936854253No Hit
GTACACACCGCCCGTCAAACCATCTTAGTTGTGGGTGGGTGAGGCTACCT17870.8055500459799131No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGATCCGGTGAGCTATTC13650.6153194251609296No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAGTAATTC12890.5810598820750464No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGTTGAATCTT11560.5211056816747507No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCTCT11250.5071313943634036No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAGCCTT11070.49901729205358913No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGCTTAGTGAGTTTCGA9940.4480787608864206No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCCTC9780.44086622549991883No Hit
GTACACACCGCCCGTCGCTACTACCGATTGGACGTTTTAGTGAGACATTT9590.43230133972844803No Hit
GTACACACCGCCCGTCGCATCTACCGATTGAATGGCCCGGTGAAGACCTG9580.4318505562667917No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGCAATCCGGTGAATATTTC8040.3624299031717124No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTTGCT7920.35702050163183613No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTCCGGTGAGGCCTTG7900.3561189347085234No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC7410.33403054508736185No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGGGTGGTCCGGTGAACCCT7260.32726879316251645No Hit
GTACACACCGCCCGTCGCTACGACCGATTGTTCCAGTTAATGAGCGATAT6700.30202491930976033No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTAGTGATCCGGTGAATAATTC6660.30022178546313494No Hit
GTACACACCGCCCGTCGCTACTACCGATTTCGAGTGGTCCGGTGAATCTT6650.29977100200147855No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGATCTTC6280.2830920139201933No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTATTT6080.27407634468706615No Hit
GTACACACCGCCCGTCAAACCAACCGAGTTATGTAGGGATGAAGCTCACT6080.27407634468706615No Hit
GTACACACCGCCCGTCGCTTCTACCGATTGTGTGTTTTGGTGAACATTTG5910.266413025838908No Hit
GTACACACCGCCCGTCGCACCAACTGATTGGATGACTCGGTGAAAAATTG5510.24838168737265368No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTCAGTGAGATAATC5390.24297228583277736No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGTGTTGGTGAGGAGCTC5350.24116915198615194No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAATAATTT5310.2393660181395265No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGATCTCC5250.23666131736958831No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGCGTTA5060.22809643159811752No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTGATGAATTGCGC4900.22088389621161578No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGGCCCCC4690.21141744351683228No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAGTGGTTTAGTGAGGCTCAC4620.20826195928523775No Hit
GTACACACCGCCCGTCGCTAGTACCGATTTCGAGTTGTCCGGTGAACCTT4280.19293532158892154No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTGAGTGGTCCGGTGAATCTTT4220.1902306208189834No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAATGTTC4040.18211651850916893No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACATTTTAGTGAGGTCCTC3970.17896103427757443No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGGGAGATTTCC3850.1735516327376981No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGCGCTC3720.16769144773616546No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCCGGTGAACTTTTT3700.16678988081285273No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGGTTTAGTGAGTTTCGA3580.16138047927297644No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAGCTATTC3180.1433491408067221No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGCTCGAG3090.13929208965181486No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGTTTAGTGAGACCCTC3060.13793973926684577No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGGTTCGGTGAACTTTTT3060.13793973926684577No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCCT3040.13703817234353308No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAGTGATCTGGTGAACCTTCT2930.13207955426531312No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAAACTTC2840.1280225031104059No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGGATGGTCCGGTGAACTGGTC2700.12171153464721686No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGTCTTC2480.11179429849077697No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGCTCGGTGAGGCCTCA2460.11089273156746425No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAATGGCTTAGTGAGACCTCC2380.10728646387421338No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAGTGGTCCGGTGAGATCTCG2290.10322941271930616No Hit
GTACACACCGCCCGTCTCTCCTACCGATTTCGAGTGGTCCGGTGAATCTT2260.10187706233433709No Hit
GTACACACCGCCCGTCGCTCCTACCGATTGAACGTGCTGGTGAAGAGTTT2250.10142627887268071No Hit
GTACACACCGCCCGTCACACCATGGAAGTGGATTGCACCAGAAGTAGATA2240.10097549541102435No Hit
GTACACACCGCCCGTCGCTCCTACCGATTTCGAGTGGTCCGGTGAACCTT2230.100524711949368No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)