FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1U_S114_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1U_S114_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42930
Total Bases12.9 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCG2130.49615653389238296No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1800.41928721174004197No Hit
GGTACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1720.4006522245515956No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1380.3214535290006988No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1270.2958304216165851No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1250.2911716748194736No Hit
GGTACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC1220.2841835546238062No Hit
GTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAGGCCTCG1210.2818541812252504No Hit
GGAACTGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC1200.2795248078266946No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1190.2771954344281388No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1180.27486606102958305No Hit
GGAACTGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1170.27253668763102723No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC1080.25157232704402516No Hit
GGTACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC1040.242254833449802No Hit
GGTACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC1010.23526671325413465No Hit
GGTACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC950.2212904728627999No Hit
GGTACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC940.2189610994642441No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC890.2073142324714652No Hit
GGTACTGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC880.20498485907290942No Hit
GGTACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC850.197996738877242No Hit
GGTACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC830.19333799208013044No Hit
GGAACTGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC830.19333799208013044No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC810.18867924528301888No Hit
GGTACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC800.1863498718844631No Hit
GGTACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC780.1816911250873515No Hit
GGTACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC780.1816911250873515No Hit
GGTACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC770.1793617516887957No Hit
GGAACTGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC770.1793617516887957No Hit
GGAACTGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC740.17237363149312834No Hit
GGTACTGGTTGAACTGTATACCCCCCATTGTCTAGTATCACAGCACACTC740.17237363149312834No Hit
GGAACTGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC740.17237363149312834No Hit
GGTACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC730.17004425809457258No Hit
GTACACACCGCCCGTCGCTACTACCGATTGAACGTTTTAGTGAGGTATTT730.17004425809457258No Hit
GGAACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC720.16771488469601675No Hit
GGTACTGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC700.1630561378989052No Hit
GGTACTGGTTGAACTGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC690.1607267645003494No Hit
GGAACAGGTTGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC690.1607267645003494No Hit
GGTACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC670.15606801770323783No Hit
GGAACAGGTTGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC650.15140927090612624No Hit
GGAACTGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC650.15140927090612624No Hit
GGAACTGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC650.15140927090612624No Hit
GGTACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC650.15140927090612624No Hit
GGTACAGGATGAACTGTTTATCCTCCATTGTCTAGTATCACAGCACACTC640.14907989750757047No Hit
GGAACAGGTTGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC630.14675052410901468No Hit
GGAACAGGTTGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC620.14442115071045888No Hit
GGTACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC610.1420917773119031No Hit
GGAACTGGATGAACAGTTTATCCTCCATTGTCTAGTATCACAGCACACTC610.1420917773119031No Hit
GGAACTGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC590.13743303051479153No Hit
GGTACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC590.13743303051479153No Hit
GGTACTGGTTGAACAGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC590.13743303051479153No Hit
GGAACAGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC590.13743303051479153No Hit
GGTACAGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC590.13743303051479153No Hit
GGTACAGGATGAACTGTTTACCCTCCATTGTCTAGTATCACAGCACACTC570.13277428371767994No Hit
GGTACTGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC570.13277428371767994No Hit
GGAACTGGTTGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC570.13277428371767994No Hit
GGTACAGGTTGAACTGTATACCCTCCATTGTCTAGTATCACAGCACACTC560.13044491031912417No Hit
GGAACTGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC560.13044491031912417No Hit
GGTACTGGATGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC560.13044491031912417No Hit
GGAACAGGTTGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC550.12811553692056835No Hit
GGTACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC550.12811553692056835No Hit
GGTACTGGTTGAACTGTTTACCCCCCATTATCTAGTGGTAATTCTCATTC550.12811553692056835No Hit
GGTACTGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC540.12578616352201258No Hit
GGAACTGGATGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC540.12578616352201258No Hit
GGTACAGGATGAACTGTTTACCCCCCATTGTCTAGTATCACAGCACACTC530.12345679012345678No Hit
GGTACTGGTTGAACAGTTTACCCTCCATTATCTAGTGGTAATTCTCATTC530.12345679012345678No Hit
GGTACTGGTTGAACAGTATACCCCCCATTGTCTAGTATCACAGCACACTC510.11879804332634522No Hit
GGAACTGGTTGAACTGTATACCCCCCATTGTCTAGTATCACAGCACACTC510.11879804332634522No Hit
GGTACAGGTTGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC500.11646866992778944No Hit
GGAACAGGATGAACAGTTTATCCCCCATTGTCTAGTATCACAGCACACTC500.11646866992778944No Hit
GGAACTGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC490.11413929652923363No Hit
GGAACTGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC480.11180992313067784No Hit
GGTACAGGATGAACTGTTTATCCCCCATTGTCTAGTATCACAGCACACTC470.10948054973212205No Hit
GGTACTGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC470.10948054973212205No Hit
GGTACAGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC470.10948054973212205No Hit
GGTACAGGTTGAACTGTATACCCCCCATTGTCTAGTATCACAGCACACTC470.10948054973212205No Hit
GGTACTGGTTGAACAGTATACCCTCCATTGTCTAGTATCACAGCACACTC460.10715117633356627No Hit
GGTACAGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC460.10715117633356627No Hit
GGAACTGGTTGAACAGTTTACCCCCCATTGTCTAGTATCACAGCACACTC460.10715117633356627No Hit
GGTACTGGATGAACTGTATATCCCCCATTGTCTAGTATCACAGCACACTC460.10715117633356627No Hit
GGAACAGGTTGAACTGTTTATCCTCCATTATCTAGTGGTAATTCTCATTC450.10482180293501049No Hit
GGTACTGGATGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC440.10249242953645471No Hit
GGAACAGGTTGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC440.10249242953645471No Hit
GGAACTGGTTGAACTGTTTATCCCCCATTATCTAGTGGTAATTCTCATTC440.10249242953645471No Hit
GGTACTGGTTGAACTGTATATCCCCCATTATCTAGTGGTAATTCTCATTC440.10249242953645471No Hit
GGTACTGGTTGAACAGTATATCCCCCATTGTCTAGTATCACAGCACACTC440.10249242953645471No Hit
GGTACAGGTTGAACAGTATATCCTCCATTGTCTAGTATCACAGCACACTC440.10249242953645471No Hit
GGAACTGGATGAACTGTATATCCTCCATTGTCTAGTATCACAGCACACTC430.1001630561378989No Hit
GGTACTGGTTGAACTGTATATCCTCCATTATCTAGTGGTAATTCTCATTC430.1001630561378989No Hit
GGTACTGGTTGAACAGTATATCCTCCATTATCTAGTGGTAATTCTCATTC430.1001630561378989No Hit
GGTACAGGATGAACAGTTTACCCTCCATTGTCTAGTATCACAGCACACTC430.1001630561378989No Hit
GGTACTGGTTGAACAGTATACCCTCCATTATCTAGTGGTAATTCTCATTC430.1001630561378989No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)