FastQCFastQC Report
Fri 18 Apr 2025
Yell_July18_Site1J_S99_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameYell_July18_Site1J_S99_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8723
Total Bases2.6 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATCCTTCTGCAGGTTCACCTACGGAAACCTTGTTACGACTTTTACTTC3063.5079674423936718No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1361.5590966410638543No Hit
TGATCCTTCTGCAGGTTCACCTACGGAAACCTTGTTACGACTTCACCTTC1071.2266422102487677No Hit
TGATCCTTCTGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTC1021.1693224807978906No Hit
GGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG620.7107646451908747No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG570.6534449157399977No Hit
TGATCCTTCTTCAGGTTCACCTACGGAAACCTTGTTACGACTTTTACTTC550.6305170239596469No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG530.6075891321792961No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG410.4700217814971913No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG390.44709388971684055No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG380.43562994382666514No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG380.43562994382666514No Hit
TAGACCTCGGGGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG340.38977416026596357No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG330.37831021437578816No Hit
TAGACTTCGGGGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG310.35538232259543734No Hit
TAGACCTCGGGATGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG300.34391837670526193No Hit
TAGACCTCGGGGTGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG290.3324544308150866No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG280.32099048492491117No Hit
TAGACTTCGGGATGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG270.30952653903473576No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG260.29806259314456035No Hit
TAGACTTCGGGGTGGCCAAAAAATCAGAATAAATGTTGGTATAAAACTGG240.2751347013642096No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG230.2636707554740342No Hit
TAGACCTCGGGATGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG220.25220680958385877No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAATAAATGCTGATATAAAATCGG220.25220680958385877No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG220.25220680958385877No Hit
TAGACTTCGGGGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG220.25220680958385877No Hit
TAGACTTCGGGATGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG210.24074286369368336No Hit
TAGACTTCGGGATGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG200.22927891780350795No Hit
TAGACCTCGGGGTGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG200.22927891780350795No Hit
TGATCCTTCTTCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTC200.22927891780350795No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAATAAATGTTGATATAAAATAGG200.22927891780350795No Hit
TAGACCTCGGGGTGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG200.22927891780350795No Hit
TAGACTTCGGGGTGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG200.22927891780350795No Hit
TAGACTTCGGGGTGGCCGAAGAATCAGAACAAGTGTTGATAAAGAATCAC190.21781497191333257No Hit
TAGACTTCGGTGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG180.20635102602315716No Hit
TAGACTTCGGGATGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG180.20635102602315716No Hit
TAGACTTCGGTGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG180.20635102602315716No Hit
TAGACCTCGGGATGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG170.19488708013298178No Hit
TAGACTTCGGGGTGGCCAAAAAACCAAAATAAATGTTGGTATAACACTGG170.19488708013298178No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAACAAGTGTTGATAAAGAATCAC160.18342313424280637No Hit
TAGACCTCGGGGTGGCCAAAAAATCAAAATAAATGTTGGTATAACACTGG160.18342313424280637No Hit
TAGACTTCGGGGTGGCCGAAAAACCAGAATAAATGTTGGTATAAAACTGG160.18342313424280637No Hit
TAGACTTCGGGGTGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG160.18342313424280637No Hit
TAGACCTCGGGATGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG160.18342313424280637No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAATAAATGCTGATATAAAATCGG150.17195918835263097No Hit
TAGACTTCGGGATGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG150.17195918835263097No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAATAAATGTTGATATAAAATAGG150.17195918835263097No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAACAAGTGTTGATAAAGAATCAC150.17195918835263097No Hit
TGATCCTTCTTCAGGTTCACCTACGGAAACCTTGTTACGACTTCACCTTC150.17195918835263097No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAATAAATGTTGATATAAAATAGG140.16049524246245558No Hit
TAGACTTCGGGGTGGCCAAAGAATCAAAAAAGGTGCTGGAACAAAATAGG140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAATAAATGCTGGTACAGCACTGG140.16049524246245558No Hit
TAGACTTCGGGGTGGCCAAAGAATCAGAACAAGTGTTGATAAAGAATCAC140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAACAAGTGTTGATAAAGAATCAC140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAGAATCAGAACAAGTGTTGATAAAGAATCAC140.16049524246245558No Hit
TAGACTTCGGGATGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG140.16049524246245558No Hit
TAGACCTCGGGATGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAAAACCAGAATAAATGTTGGTATAAAACTGG140.16049524246245558No Hit
TAGACCTCGGGGTGGCCAAAAAATCAGAATAAATGTTGGTATAAAACTGG140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAAAAGGTGCTGGAACAAAATAGG140.16049524246245558No Hit
TAGACCTCGGGGTGGCCGAAAAATCAGAATAAATGTTGATATAAAATAGG130.14903129657228018No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAATAAATGTTGATATAAAATAGG130.14903129657228018No Hit
TAGACTTCGGGATGGCCGAAAAACCAGAATAAATGTTGGTATAAAACTGG130.14903129657228018No Hit
TAGACCTCGGTGTGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG130.14903129657228018No Hit
TAGACCTCGGGGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG130.14903129657228018No Hit
TAGACTTCGGGGTGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG130.14903129657228018No Hit
TAGACTTCGGGATGGCCAAAGAATCAAAATAAATGTTGGTATAACACTGG130.14903129657228018No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAATAAATGTTGATATAAAATAGG130.14903129657228018No Hit
TAGACCTCGGGATGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG130.14903129657228018No Hit
TAGACCTCGGGGTGGCCGAAAAACCAAAATAAATGTTGGTATAACACTGG130.14903129657228018No Hit
TAGACTTCGGGGTGGCCAAAAAATCAGAATAAATGCTGATATAAAATCGG120.1375673506821048No Hit
TAGACTTCGGGGTGGCCAAAGAACCAGAATAAATGTTGGTATAAAACTGG120.1375673506821048No Hit
TAGACTTCGGGGTGGCCGAAAAATCAGAATAAATGCTGATATAAAATCGG120.1375673506821048No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAGATGTTGGTAGAGTAAGGG120.1375673506821048No Hit
TAGACTTCGGTGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG120.1375673506821048No Hit
TAGACCTCGGTGTGGCCGAAGAATCAGAATAAATGTTGGTATAAAACTGG120.1375673506821048No Hit
TAGACTTCGGGATGGCCGAAAAATCAAAAAAGGTGCTGGAACAAAATAGG120.1375673506821048No Hit
TAGACTTCGGGGTGGCCAAAGAACCAGAATAAATGTTGATATAAAATAGG110.12610340479192939No Hit
TAGACTTCGGGGTGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG110.12610340479192939No Hit
TAGACTTCGGGGTGGCCGAAGAACCAAAAAAGGTGCTGGAACAAAATAGG110.12610340479192939No Hit
TAGACTTCGGGATGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG110.12610340479192939No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAATAAATGCTGATATAAAATCGG110.12610340479192939No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAACAAGTGTTGATAAAGAATCAC110.12610340479192939No Hit
TAGACCTCGGGGTGGCCAAAAAATCAGAACAAGTGTTGATAAAGAATCAC110.12610340479192939No Hit
TAGACTTCGGGGTGGCCGAAAAATCAAAAAAGGTGCTGGAACAAAATAGG110.12610340479192939No Hit
TAGACTTCGGTGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG110.12610340479192939No Hit
TAGACTTCGGGGTGGCCGAAGAACCAGAATAAATGTTGATATAAAATAGG110.12610340479192939No Hit
TAGACTTCGGTATGGCCAAAGAATCAGAATAAATGTTGGTATAAAACTGG110.12610340479192939No Hit
TAGACCTCGGGGTGGCCAAAGAACCAGAATAAATGCTGATATAAAATCGG110.12610340479192939No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAAAAGATGTTGAAATAGCACAGG100.11463945890175398No Hit
TAGACCTCGGGATGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG100.11463945890175398No Hit
TAGACCTCGGGGTGGCCGAAGAACCAGAACAAGTGTTGATAAAGAATCAC100.11463945890175398No Hit
TAGACTTCGGGGTGGCCAAAAAATCAAAAAAGGTGCTGGAACAAAATAGG100.11463945890175398No Hit
TAGACCTCGGTGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG100.11463945890175398No Hit
TAGACCTCGGGATGGCCGAAAAACCAGAATAAATGTTGGTATAAAACTGG100.11463945890175398No Hit
TAGACTTCGGTGTGGCCGAAGAACCAGAATAAATGTTGGTATAAAACTGG100.11463945890175398No Hit
TGATCCTTCTGCAGGTTCACCTACAGAAACCTTGTTACGACTTTTACTTC100.11463945890175398No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAACAAATGTTGATATAATACAGG100.11463945890175398No Hit
TAGACCTCGGGATGGCCGAAGAATCAAAATAAATGCTGGTACAGCACTGG100.11463945890175398No Hit
TAGACCTCGGGATGGCCAAAAAATCAGAATAAATGTTGGTATAAAACTGG100.11463945890175398No Hit
TAGACCTCGGGATGGCCGAAGAACCAAAATAAATGTTGGTATAACACTGG100.11463945890175398No Hit
TAGACCTCGGTGTGGCCGAAGAATCAAAATAAATGTTGGTATAACACTGG100.11463945890175398No Hit
TAGACCTCGGGGTGGCCAAAGAATCAAAAAAGGTGCTGGAACAAAATAGG100.11463945890175398No Hit
TAGACCTCGGTGTGGCCGAAAAATCAGAATAAATGTTGGTATAAAACTGG100.11463945890175398No Hit
TAGACCTCGGGGTGGCCGAAGAATCAAAATAGGTGCTGGTACAACACAGG90.10317551301157858No Hit
TAGACCTCGGGGTGGCCGAAGAACCAAAAAAGGTGCTGGAACAAAATAGG90.10317551301157858No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAATAAATGCTGATATAAAATCGG90.10317551301157858No Hit
TAGACCTCGGGGTGGCCGAAGAACCAAAATAAGTGTTGATACAGAACTGG90.10317551301157858No Hit
TAGACTTCGGGATGGCCAAAGAATCAGAATAAATGTTGATATAAAATAGG90.10317551301157858No Hit
TAGACTTCGGGGTGGCCAAAAAATCAAAATAAGTGTTGATACAGAACTGG90.10317551301157858No Hit
TAGACCTCGGGATGGCCGAAGAATCAAAATAGGTGCTGGTACAACACAGG90.10317551301157858No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAAGTGTTGATACAGAACTGG90.10317551301157858No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAAAAGATGTTGAAATAGCACAGG90.10317551301157858No Hit
TAGACCTCGGGGTGGCCGAAAAACCAGAATAAATGTTGATATAAAATAGG90.10317551301157858No Hit
TAGACTTCGGGATGGCCGAAGAATCAAAAAAGATGTTGAAATAGCACAGG90.10317551301157858No Hit
TAGACTTCGGTGTGGCCAAAGAACCAAAATAAATGTTGGTATAACACTGG90.10317551301157858No Hit
TAGACCTCGGGGTGGCCGAAAAATCAAAAAAGGTGCTGGAACAAAATAGG90.10317551301157858No Hit
TAGACTTCGGGATGGCCGAAAAATCAGAATAAATGTTGATATAAAATAGG90.10317551301157858No Hit
TAGACCTCGGGATGGCCGAAAAATCAGAACAAGTGTTGATAAAGAATCAC90.10317551301157858No Hit
TAGACTTCGGGGTGGCCGAAGAATCAAAATAAATGCTGGTACAGCACTGG90.10317551301157858No Hit
TAGACCTCGGGATGGCCGAAGAACCAGAACAAGTGTTGATAAAGAATCAC90.10317551301157858No Hit
TAGACCTCGGGATGGCCGAAGAATCAGAATAAATGCTGATATAAAATCGG90.10317551301157858No Hit
TAGACTTCGGTGTGGCCGAAAAATCAAAATAAATGTTGGTATAACACTGG90.10317551301157858No Hit
TAGACTTCGGGATGGCCGAAGAATCAGAACAAGTGTTGATAAAGAATCAC90.10317551301157858No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)