FastQCFastQC Report
Thu 6 Jun 2024
RESUB-156_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameRESUB-156_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16637284
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1057520.635632594839398No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA243990.14665254256644292No Hit
TGTCACTTCTTGGTTCTGCACGTCTAACTCACCAGCAGAGATGAACGGAA194970.1171885988121619No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)