FastQCFastQC Report
Thu 6 Jun 2024
110_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename110_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21306024
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1953980.917102130364633No Hit
TGTCACTTCTTGGTTCTGCACGTCTAACTCACCAGCAGAGATGAACGGAA497080.2333049094472061No Hit
GGAAAATTCGCTTTGGCACTCATCCTCTGCCTCCAGGTCTCCCTGAGCCT459360.2156009962252929No Hit
CTGTATGCCAGCATAGGCAGTGACCAGCGGCGCTTAGTGAAAACACACAC277910.13043728853398456No Hit
CTTCTTGGTTCTGCACGTCTAACTCACCAGCAGAGATGAACGGAAAATTC277300.13015098452907028No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA267260.12543870221867767No Hit
GTCACTTCTTGGTTCTGCACGTCTAACTCACCAGCAGAGATGAACGGAAA258780.1214586071995413No Hit
TGAAGGCCTACCTGCTGTTACTGCTCCTGCTCCCGGTCTGCCTGGCTGAC218200.10241235061032505No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)