Genome: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/data/genome_files/GCF_026571515.1_ASM2657151v2_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: NW_026862013.1:99680-99780 plus
PDF file name: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_22161.ps.pdf
Locus Name: Cluster_22161
GGAGGAGUUUACGCUUGUGUUGAAUGGCACUGGUAGAAUUCACGGAGUUUAAAUUAUACCGUGAUUCCCCGGUGUCAUCCAAGACACUGCGUACAAGCAAC
......((((((((.(((.(((.((((((((((..((((.(((((.((.......)).))))))))).)))))))))).))).)))..)))))..)))... (-38.20)
.....................aAAUGGCACUGGUAGAAUUCACGG........................................................ len:24 al:4
.....................aAAUGGCACUGGUAGAAUUCACG......................................................... len:23 al:1
.....................cAAUGGCACUGGUAGAAUUCACG......................................................... len:23 al:2
.....................uAAUGGCACUGGUAGAAUUCACGG........................................................ len:24 al:2
.....................uAAUGGCACUGGUAGAAUUCACG......................................................... len:23 al:1
.....................cAAUGGCACUGGUAGAAUUCACGG........................................................ len:24 al:3
.....................cAAUGGCACUGGUAGAAUUCAC.......................................................... len:22 al:1
......................AAUGGCACUGGUAGAAUUCACGGgGU..................................................... len:26 al:7
......................AAUGGCACUGGUAGAAUUCACc......................................................... len:22 al:172
......................uAUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:4
......................AAUGGCACUGGUAGAAUUCACaGA....................................................... len:24 al:15
......................AAUGGCACUGGUAGAAUUCACuGA....................................................... len:24 al:4
......................AAaGGCACUGGUAGAAUUCACG......................................................... len:22 al:25
......................AAUGGCACUGGUAGAcUUCAC.......................................................... len:21 al:5
......................AuUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:7
......................AAUGGCAaUGGUAGAAUUCAC.......................................................... len:21 al:3
......................AAUGGCACUGGUuGAAUUCACG......................................................... len:22 al:39
......................AAUGGCACUGGUAGAuUUCACG......................................................... len:22 al:7
......................AAUGGCACUGGUAGAAUUCACGGgG...................................................... len:25 al:4
......................AAUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:12384
......................AAUGGCACUGGUAGuAUUCACGGA....................................................... len:24 al:3
......................AAUGGCACUGaUAGAAUUCAC.......................................................... len:21 al:15
......................AAUGGCACUGGUAGAAUUCACcG........................................................ len:23 al:30
......................AAUGGCACUGGUAGAAUUCu........................................................... len:20 al:1
......................AAUuGCACUGGUAGAAUUCACGG........................................................ len:23 al:14
......................AAUGGCACUGGUAGAAUUa............................................................ len:19 al:15
......................AAUGGCACUuGUAGAAUUCACGG........................................................ len:23 al:23
......................AgUGGCACUGGUAGAAUUC............................................................ len:19 al:2
......................AAUGGCACUGGUAGAAUUCACGGu....................................................... len:24 al:1436
......................AAUGGCACUGGUAGAAUcCACGGA....................................................... len:24 al:29
......................AAUGuCACUGGUAGAAUUCACGG........................................................ len:23 al:17
......................AAUGGCACUGGUAGAAUcCACGG........................................................ len:23 al:516
......................AAUGGCACUGGUAGAAUUCACGGAGgU.................................................... len:27 al:1
......................AAUGGCACUGGUAGAAUUCACGGAGc..................................................... len:26 al:3
......................AAUGGCACUGuUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGGCACUGGUuGAAUU............................................................. len:18 al:1
......................AAUaGCACUGGUAGAAUUCACGG........................................................ len:23 al:165
......................AAUGGCACUGGUAGAAUUCACGGAuU..................................................... len:26 al:9
......................AAUGGCAaUGGUAGAAUUCACGGA....................................................... len:24 al:7
......................AAUGGCACUGGUAGAAUUCAa.......................................................... len:21 al:128
......................AAUGGCACUGGUAGgAUUCACGG........................................................ len:23 al:828
......................gAUGGCACUGGUAGAAUUCACG......................................................... len:22 al:331
......................AAUGGCACUGGUAGAAUUu............................................................ len:19 al:3
......................AAUGGCACUGGUAGgAUUCACG......................................................... len:22 al:420
......................AAUGaCACUGGUAGAAUUCACGG........................................................ len:23 al:148
......................AAUGGCACUGGUAGAAcUCACG......................................................... len:22 al:222
......................AAUGGCACUGGUAGAAUUCACa......................................................... len:22 al:14452
......................AgUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:52
......................AAUGGCACUGGUAGAAgUCACGG........................................................ len:23 al:6
......................AAUGGCACUGGcAGAAUU............................................................. len:18 al:2
......................AAUGGCACUGGUAGgAUUCAC.......................................................... len:21 al:63
......................AAUGGCuCUGGUAGAAUUCACGGA....................................................... len:24 al:4
......................AAUGGCACUGaUAGAAUUCACGGAG...................................................... len:25 al:1
......................AAUGGCACUGGUAGAAUUCACGaA....................................................... len:24 al:30
......................AAUGGCACUGGUgGAAUUCAC.......................................................... len:21 al:31
......................AAcGGCACUGGUAGAAUUCACG......................................................... len:22 al:224
......................AAUGGCACUGGUAGAAUcCAC.......................................................... len:21 al:43
......................AAUGGCgCUGGUAGAAUUC............................................................ len:19 al:2
......................AAUGGCACUGaUAGAAUUCACGGA....................................................... len:24 al:13
......................AAUGGaACUGGUAGAAUUCACGG........................................................ len:23 al:10
......................AAUGGCACUGGUAGAAU.............................................................. len:17 al:1
......................AAUuGCACUGGUAGAAUUCACGGA....................................................... len:24 al:1
......................AAUGGCACUGGUAGAAUcC............................................................ len:19 al:1
......................AAUGGCACUGGUAGAAUUCuC.......................................................... len:21 al:1
......................AAUGGCACUGGUgGAAUUCACG......................................................... len:22 al:254
......................AAUGGCACUGGUAGAAUUCAg.......................................................... len:21 al:15
......................AAUGGCACUGGUAGAcUUCACGGA....................................................... len:24 al:3
......................AAUGGCACUGGUAaAAUUCACGGA....................................................... len:24 al:2
......................AAUGGCACUGGUAGAAUUCcC.......................................................... len:21 al:2
......................AAUGGCACUGGUAuAAUUCACG......................................................... len:22 al:10
......................AAUGGCACUGGaAGAAUUCAC.......................................................... len:21 al:3
......................AAUGGCACUGGUAGAAUUCACGGuGUU.................................................... len:27 al:3
......................AAUGGCAuUGGUAGAAUUCACGG........................................................ len:23 al:139
......................AAUGGCACUGGUAGAAUUCAaG......................................................... len:22 al:148
......................AAUGGCACUGGUAGAAUUCgCGGA....................................................... len:24 al:39
......................AgUGGCACUGGUAGAAUUCACGGAG...................................................... len:25 al:1
......................AAUGGCACUGGUAGAAaUCACGGA....................................................... len:24 al:2
......................AAUGGCACUGGUgGAAUUC............................................................ len:19 al:2
......................AAUGGCgCUGGUAGAAUUCACG......................................................... len:22 al:331
......................AAUGaCACUGGUAGAAUUCACG......................................................... len:22 al:79
......................AAUGGCACUGGUAGAAUUCACu......................................................... len:22 al:409
......................AAUGGCACUGaUAGAAUUCACG......................................................... len:22 al:56
......................AAaGGCACUGGUAGAAUUCACGG........................................................ len:23 al:64
......................AAUGGCACUGGUAGuAUUCAC.......................................................... len:21 al:6
......................AAUGGCACUGGUAGAAUUCAuGGA....................................................... len:24 al:13
......................AAUGGCACUGGUAGAAUU............................................................. len:18 al:380
......................AAUGGCAaUGGUAGAAU.............................................................. len:17 al:1
......................AAUGGuACUGGUAGAAUUC............................................................ len:19 al:2
......................AAUGGgACUGGUAGAAUUCACGG........................................................ len:23 al:8
......................AAUGGCACUGGUAGAgUUCACG......................................................... len:22 al:266
......................AAUGGCACUGGUAGgAUU............................................................. len:18 al:1
......................AAUGGCACUGGUAGAAUUCACGGAaU..................................................... len:26 al:27
......................AAUGGCACUGGUAGAAUUCAgG......................................................... len:22 al:133
......................AAUGGCACUGGUuGAAUUCACGGA....................................................... len:24 al:4
......................AAUGGCACUGGUcGAAUUCACGG........................................................ len:23 al:41
......................AAgGGCACUGGUAGAAUUCACG......................................................... len:22 al:22
......................AAUGGCACUGGUAGAAUUuACGGA....................................................... len:24 al:8
......................AAUGGCcCUGGUAGAAUUCACGG........................................................ len:23 al:89
......................AAaGGCACUGGUAGAAUUCAC.......................................................... len:21 al:11
......................AAUGGCACUGGUAGAAUUCACGu........................................................ len:23 al:4261
......................AAUGGCACUGGUAGAAUaCAC.......................................................... len:21 al:8
......................AAUGGCACUGGUAGAAUUCACGc........................................................ len:23 al:1251
......................AAUGGCACUGGcAGAAUUCACGGA....................................................... len:24 al:26
......................gAUGGCACUGGUAGAAUUC............................................................ len:19 al:1
......................AAUGGuACUGGUAGAAUUCACG......................................................... len:22 al:108
......................AAUGGCACUaGUAGAAUUCACG......................................................... len:22 al:87
......................AAUGGCACUGuUAGAAUUCACG......................................................... len:22 al:8
......................cAUGGCACUGGUAGAAUUCACG......................................................... len:22 al:174
......................AAUGGCACUGGUAGAAUUCAu.......................................................... len:21 al:956
......................AAUGGCACcGGUAGAAUUCACG......................................................... len:22 al:193
......................AAcGGCACUGGUAGAAUUCAC.......................................................... len:21 al:28
......................AAUGGCACUGGUAGAAUUCAuGG........................................................ len:23 al:171
......................AAUGGCACUGGUAGAAUUCACGGc....................................................... len:24 al:228
......................AAUGGCACUGGUAGgAUUC............................................................ len:19 al:1
......................AAUGGCACUGGUAGAAUUCACGaAG...................................................... len:25 al:6
......................AAUGGCACcGGUAGAAUUCAC.......................................................... len:21 al:26
......................AAUGGCACUGuUAGAAUUCACGG........................................................ len:23 al:10
......................AAUGGCcCUGGUAGAAUUCAC.......................................................... len:21 al:6
......................AAUGGCACUGGUAGAAUUgAC.......................................................... len:21 al:4
......................AgUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:671
......................AAUGGCACUGGUAcAAUUCACGG........................................................ len:23 al:1
......................AAUGGCACUGGUAcAAUUCACG......................................................... len:22 al:1
......................AAUGaCACUGGUAGAAUUCAC.......................................................... len:21 al:10
......................AAUGGCACaGGUAGAAUUCACGGA....................................................... len:24 al:9
......................AAUGGCACUGGUAGAAUUCcCGG........................................................ len:23 al:51
......................AAUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:173462
......................cAUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:21
......................AAUGGCACUGGUAGAAUcCA........................................................... len:20 al:2
......................AAUGGCACUGGUAGAAUcCACG......................................................... len:22 al:293
......................AAUGGCACUGGUAGAAUUCuCGGA....................................................... len:24 al:2
......................AAUGGCACUGGUAGAAUUgACG......................................................... len:22 al:47
......................AAUGGCACUGGUAGAAUUuACG......................................................... len:22 al:55
......................AAUGGCACUGGUAGAgUUCACGG........................................................ len:23 al:478
......................AAUaGCACUGGUAGAAUUCAC.......................................................... len:21 al:12
......................gAUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:39
......................AAUGGCACUGGUAGuAUUCACG......................................................... len:22 al:22
......................AAUGGCACUGGUAGAAUUgACGGA....................................................... len:24 al:4
......................AAUGGCACUGGUAGAAUUgACGG........................................................ len:23 al:92
......................AAUGGuACUGGUAGAAUUCA........................................................... len:20 al:1
......................AAUGGCACUGGaAGAAUUCACG......................................................... len:22 al:14
......................AAUGGuACUGGUAGAAUUCACGG........................................................ len:23 al:235
......................AAUGGCACUGGUAGAAUUaA........................................................... len:20 al:2
......................AcUGGCACUGGUAGAAUUCACG......................................................... len:22 al:34
......................AAUGGCACUGGgAGAAUUCACG......................................................... len:22 al:37
......................AAUGGCACUGGUAGcAUUCACGGA....................................................... len:24 al:2
......................AAUGGCACUGGUAGAAUaCACGG........................................................ len:23 al:49
......................AAUGGCACUGGUAGAAUgCACGGA....................................................... len:24 al:1
......................AAUGGCACUGGUAGAAUUgA........................................................... len:20 al:1
......................AAUGGCACUGGgAGAAUUCAC.......................................................... len:21 al:3
......................AAUGaCACUGGUAGAAUUC............................................................ len:19 al:1
......................AAUGGCACgGGUAGAAUUCACGG........................................................ len:23 al:26
......................AuUGGCACUGGUAGAAUUCACG......................................................... len:22 al:32
......................AAUGGCACUaGUAGAAUUCACGG........................................................ len:23 al:144
......................gAUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:43
......................AAUGGCACUGGUcGAAUUCACGGA....................................................... len:24 al:11
......................AAUGGCACUGGUAGAAUUCAaGG........................................................ len:23 al:248
......................AAUGGCACUGGUuGAAUUCACGG........................................................ len:23 al:86
......................AAUGGCACUGGUgGAAUUCACGGA....................................................... len:24 al:23
......................AAUcGCACUGGUAGAAUUCACG......................................................... len:22 al:1
......................AAUGGCACUGGUAGAcUUCACGG........................................................ len:23 al:23
......................AAcGGCACUGGUAGAAUUCACGG........................................................ len:23 al:425
......................AAUGGCACUuGUAGAAUUCAC.......................................................... len:21 al:2
......................AAUGGCACUGGUAGAAUUaACGG........................................................ len:23 al:4
......................AAUGGCACUGGUAGAAUUCACGGAGU..................................................... len:26 al:5
......................AAUGGCACUGGUAGAAUUCACGGAaUU.................................................... len:27 al:2
......................AAUGGCAuUGGUAGAAUUCACGGA....................................................... len:24 al:18
......................AAUGGCACUGGUAGAAUUCACGGcG...................................................... len:25 al:1
......................AAUGGCACUGGUcGAAUUCACG......................................................... len:22 al:33
......................AAUGGCACUuGUAGAAUUCACG......................................................... len:22 al:11
......................AAUGGCACUGGUcGAAUUCAC.......................................................... len:21 al:7
......................AAUGGCACUGGUAaAAUUCACGG........................................................ len:23 al:86
......................AAUGGCACUGGUAGAA............................................................... len:16 al:1
......................AAUGGCAuUGGUAGAAUUC............................................................ len:19 al:1
......................uAUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:122
......................AAUGGCACUcGUAGAAUUCACG......................................................... len:22 al:4
......................AAUGGCACgGGUAGAAUUCACG......................................................... len:22 al:17
......................AAUGaCACUGGUAGAAUUCACGGA....................................................... len:24 al:8
......................AAUGGCACUGGUAGAAUUCACGGuGU..................................................... len:26 al:4
......................AAUGGCACUGGUAGAAaUCACG......................................................... len:22 al:11
......................AAUGGCACUGGUAGAAUUCuCG......................................................... len:22 al:13
......................AAUGGCACgGGUAGAAUUCAC.......................................................... len:21 al:2
......................AAUGGCACUGGaAGAAUUCACGGA....................................................... len:24 al:3
......................AAUGGCAaUGGUAGAAUUCACG......................................................... len:22 al:20
......................AAUGGCACUGGUAGAAUUCACGGAGa..................................................... len:26 al:74
......................AAUGuCACUGGUAGAAUUCAC.......................................................... len:21 al:4
......................AAUGGCACUGGUAGAAUUCAgGG........................................................ len:23 al:210
......................AAUGGCACUGGUAGAAUUCACGGAc...................................................... len:25 al:18
......................AAUGGCACUGGUAGgAUUCACGGA....................................................... len:24 al:51
......................AuUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:5
......................AAUGGCACUGGUAGcAUUCAC.......................................................... len:21 al:3
......................AAUGGCACUGGUAGAAUUC............................................................ len:19 al:213
......................AAUaGCACUGGUAGAAUUCACGGA....................................................... len:24 al:13
......................AAUaGCACUGGUAGAAUUCACG......................................................... len:22 al:68
......................AAUGGCACUGGUAGAAUUuA........................................................... len:20 al:1
......................AAUGGCACUGGUAGAAUUaAC.......................................................... len:21 al:6
......................AAUGGaACUGGUAGAAUUCACG......................................................... len:22 al:2
......................AAgGGCACUGGUAGAAUUCAC.......................................................... len:21 al:2
......................AAUGGCACUGGUAGAAUUuAC.......................................................... len:21 al:9
......................AAUGGCAuUGGUAGAAUUCACG......................................................... len:22 al:85
......................AAUGGCACUGGUAGAAgUCACG......................................................... len:22 al:2
......................AAUGGgACUGGUAGAAUUCA........................................................... len:20 al:1
......................AAUGGCACUGGUAGAAUUCcCGGA....................................................... len:24 al:5
......................AAUGGCACcGGUAGAAUUCACGGA....................................................... len:24 al:28
......................AAUGGCACUGGUAGAAUUaACGGA....................................................... len:24 al:1
......................AAUGGCACUGcUAGAAUUCACGGA....................................................... len:24 al:3
......................AAUGGCACUGGUAGAAUUCgC.......................................................... len:21 al:64
......................AAUGGCACgGGUAGAAUUCACGGA....................................................... len:24 al:2
......................AAUGGCACUGGUAGAAUUCAuG......................................................... len:22 al:97
......................AAUGGCAuUGGUAGAAUUCAC.......................................................... len:21 al:12
......................AAUGGCACUcGUAGAAUUCACGG........................................................ len:23 al:3
......................AAUGGCACUGGUAGAAUUCACGcA....................................................... len:24 al:6
......................AAUGGCACUGGUAGAAUUuACGG........................................................ len:23 al:122
......................AAUGGCACUGGUAGAAUUCACGGAG...................................................... len:25 al:132
......................AAUGGCACUGGUAGAAUaCACG......................................................... len:22 al:20
......................gAUGGCACUGGUAGAAUUCACGGAG...................................................... len:25 al:2
......................AAUGGCACUuGUAGAAUUCACGGA....................................................... len:24 al:1
......................AAUGGCACUGGUAGAAcUCACGGA....................................................... len:24 al:28
......................AAUGGCgCUGGUAGAAUUCACGGA....................................................... len:24 al:34
......................AAUGGCACUGGUAGAAUUCACGGAGaU.................................................... len:27 al:1
......................AAUGGCACUGGUAGAAcUCACGG........................................................ len:23 al:385
......................AAUGGCgCUGGUAGAAUU............................................................. len:18 al:1
......................AAUGGCuCUGGUAGAAUU............................................................. len:18 al:1
......................AAUGGCACUGaUAGAAUUCACGG........................................................ len:23 al:132
......................AAUGGCACUGGUAGAAUUCA........................................................... len:20 al:314
......................AAUGGCACaGGUAGAAUUCAC.......................................................... len:21 al:10
......................AAUGGCACUGGUAGAgUUCA........................................................... len:20 al:3
......................AAUGGCACUGGUAGAAUUCcCG......................................................... len:22 al:23
......................AAUGGCACUGcUAGAAUUCACGG........................................................ len:23 al:1
......................AAUGGCAgUGGUAGAAUUCAC.......................................................... len:21 al:2
......................AAUGGCACUGGUAGuAUUCACGG........................................................ len:23 al:32
......................AAUGGCACUGGgAGAAUUCACGGA....................................................... len:24 al:4
......................AAUGGCACUGGcAGAAUUCACGG........................................................ len:23 al:309
......................uAUGGCACUGGUAGAAUUC............................................................ len:19 al:1
......................AAUGGCACUGGUAGAAUgCACG......................................................... len:22 al:4
......................AAUGGCACUGGUAGAuUUCAC.......................................................... len:21 al:2
......................AAUGcCACUGGUAGAAUUCACGG........................................................ len:23 al:10
......................AcUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:4
......................AAcGGCACUGGUAGAAUUCA........................................................... len:20 al:2
......................AAUGGCACUGGUAGAAUUCACGGAcU..................................................... len:26 al:3
......................AAUGaCACUGGUAGAAUU............................................................. len:18 al:1
......................AAUGGuACUGGUAGAAUU............................................................. len:18 al:1
......................AAUaGCACUGGUAGAAUU............................................................. len:18 al:1
......................AAUGGCACUGGUAGAgUUCAC.......................................................... len:21 al:34
......................AAUGGCACUGGUAGAAaUCAC.......................................................... len:21 al:1
......................AAUGGCACUGcUAGAAUUCACG......................................................... len:22 al:6
......................AAUGGCACUGGUAGA................................................................ len:15 al:5
......................AAUGGCACUGGUAGAAUUCAgGGA....................................................... len:24 al:21
......................AAUGGCACUGGUAGAcUUCACG......................................................... len:22 al:18
......................AAUGGgACUGGUAGAAUUCACG......................................................... len:22 al:8
......................AAUGGCACUGGUAGAAUUCACGGAu...................................................... len:25 al:98
......................AgUGGCACUGGUAGAAUU............................................................. len:18 al:1
......................gAUGGCACUGGUAGAAUU............................................................. len:18 al:2
......................AAUGuCACUGGUAGAAUUCACG......................................................... len:22 al:8
......................AcUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:1
......................AAUGGCACUGGUAGAAUUCACGGAa...................................................... len:25 al:1509
......................AAUGGCACUGGUAGAAUUCACaG........................................................ len:23 al:211
......................AAUGGCACUGGUAaAAUUCAC.......................................................... len:21 al:5
......................AAUGGCACUGGUAGcAUUCACG......................................................... len:22 al:18
......................AAUGGCACUGGUAGAAUUCuCGG........................................................ len:23 al:30
......................AAUuGCACUGGUAGAAUUCAC.......................................................... len:21 al:5
......................AAUGGCACUGGcAGAAUUCACG......................................................... len:22 al:157
......................AuUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:22
......................AAUGGCAaUGGUAGAAUUCACGG........................................................ len:23 al:56
......................AAUGGCACUGGUAGAAUgCACGG........................................................ len:23 al:15
......................AAUGGCACUGGUAGAAUc............................................................. len:18 al:18
......................AAUGGCcCUGGUAGAAUUCACGGA....................................................... len:24 al:7
......................AAUGGgACUGGUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGGCACUGGUAGAAUUCACGGg....................................................... len:24 al:197
......................AAUGGCACUGGUAGAAUUCACGuA....................................................... len:24 al:2
......................cAUGGCACUGGUAGAAUUCA........................................................... len:20 al:1
......................AgUGGCACUGGUAGAAUUCACG......................................................... len:22 al:322
......................AAUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:12194
......................AAUGGCACUGGaAGAAUUCA........................................................... len:20 al:1
......................AAUGGCACUGGUAGAgUUCACGGA....................................................... len:24 al:37
......................AAUGGCgCUGGUAGAAUUCACGG........................................................ len:23 al:578
......................cAUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:17
......................AAUGGCACaGGUAGAAUUCACG......................................................... len:22 al:48
......................cAUGGCACUGGUAGAAUU............................................................. len:18 al:3
......................uAUGGCACUGGUAGAAUUCACG......................................................... len:22 al:69
......................AAUGGCACUGcUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGGCAgUGGUAGAAUUCACG......................................................... len:22 al:2
......................AAUGGCuCUGGUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGGCACUGGUAGAAUUCACuG........................................................ len:23 al:37
......................gAUGGCACUGGUAGAAUUCA........................................................... len:20 al:2
......................AAUGGCACUGGUAGAAUa............................................................. len:18 al:10
......................AAUGGCACUGGUAGAAcUCAC.......................................................... len:21 al:36
......................AAUGGCACUGGUAGAAUUCACGGAGUUUAc................................................. len:30 al:1
......................AAUGGCACUGGUAGAAgU............................................................. len:18 al:1
......................AAUGGCACUGGUAGAuUUCACGGA....................................................... len:24 al:1
......................AAUGGCACUGGUAGcAUUCACGG........................................................ len:23 al:43
......................AAUuGCACUGGUAGAAUUCACG......................................................... len:22 al:8
......................AAUGGCACUGGUAGAAUUCgCGG........................................................ len:23 al:672
......................AAUGGCACUGGUAGAuUUCACGG........................................................ len:23 al:14
......................AAUGGCACUGGUAGAAUUCg........................................................... len:20 al:7
......................AAUGGCACUGGaAGAAUUCACGG........................................................ len:23 al:10
......................AAUGGCACUGGUAuAAUUCACGG........................................................ len:23 al:11
......................AAUGGCACUGGUgGAAUUCACGG........................................................ len:23 al:486
......................AAUGGCACUGGUAGAAUaCACGGA....................................................... len:24 al:2
......................AAUGGCACUGGUAGAAUg............................................................. len:18 al:3
......................AAUGGCACcGGUAGAAUUCACGG........................................................ len:23 al:382
......................AAUGGCACUGGUAGAAUUCACG......................................................... len:22 al:90680
......................AAcGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:22
......................AAUGGCgCUGGUAGAAUUCA........................................................... len:20 al:2
......................AAUGGCuCUGGUAGAAUUCACGG........................................................ len:23 al:53
......................AAUGGCACUGGUAGgAUUCA........................................................... len:20 al:3
......................cAUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:360
......................AAUGGCACaGGUAGAAUUCACGG........................................................ len:23 al:91
......................AAUGcCACUGGUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGGCACUGGUAGAAUUCACGGuG...................................................... len:25 al:2
......................uAUGGCACUGGUAGAAUUCAC.......................................................... len:21 al:7
......................AAgGGCACUGGUAGAAUUCACGG........................................................ len:23 al:32
......................AAUGGCgCUGGUAGAAUUCAC.......................................................... len:21 al:44
......................gAUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:613
......................AgUGGCACUGGUAGAAUUCACGGA....................................................... len:24 al:51
......................AAUGGuACUGGUAGAAUUCAC.......................................................... len:21 al:10
......................AAUGGuACUGGUAGAAUUCACGGA....................................................... len:24 al:19
......................AAUGGaACUGGUAGAAUUCAC.......................................................... len:21 al:1
......................AAUGcCACUGGUAGAAUUCACG......................................................... len:22 al:18
......................AAUGGCACUGGUAaAAUUCACG......................................................... len:22 al:37
......................AAUGGCACUaGUAGAAUUCACGGA....................................................... len:24 al:15
......................AAUGGCACUGGUAGAAaUCACGG........................................................ len:23 al:13
......................AcUGGCACUGGUAGAAUUCACGG........................................................ len:23 al:65
......................AAUGGCuCUGGUAGAAUUCACG......................................................... len:22 al:36
......................AAUGGCACUGGUAGAAUUCACGGAGg..................................................... len:26 al:4
......................AAUGGCACUGGUAGAAUUCACGa........................................................ len:23 al:22727
......................AAUGGCACUGGgAGAAUUCACGG........................................................ len:23 al:60
......................AAUGGCACUaGUAGAAUUCAC.......................................................... len:21 al:12
......................AAUGGCACUGGcAGAAUUCAC.......................................................... len:21 al:22
......................AAUGGCACUGGUuGAAUUCAC.......................................................... len:21 al:5
......................AAUGGCACUGGUAGAAUUCgCG......................................................... len:22 al:386
......................AAUGGCcCUGGUAGAAUUCACG......................................................... len:22 al:29
.......................AUGGCACaGGUAGAAUUCACGG........................................................ len:22 al:2
.......................AUGGCACUGGUAGAAUUCgCGG........................................................ len:22 al:1
.......................AUGGCACUGGUAGAAUUCACGG........................................................ len:22 al:93
.......................AUGGCACUGGUAGAcUUCACGG........................................................ len:22 al:1
.......................AUGGCACUaGUAGAAUUCACGG........................................................ len:22 al:1
.......................AUaGCACUGGUAGAAUUCACGG........................................................ len:22 al:1
.......................AUGGCACUGGUAGAAUUCACG......................................................... len:21 al:34
.......................AaGGCACUGGUAGAAUUCACGG........................................................ len:22 al:2
.......................AUGGCACUGGUAGAAUcCACG......................................................... len:21 al:1
.......................AUGGCACUGGUAGAAUUCACGGA....................................................... len:23 al:7
.......................AUGGCgCUGGUAGAAUUCACG......................................................... len:21 al:1
.......................AUGGCACUGGUAGAAUUCACa......................................................... len:21 al:4
.......................AUGGCACUGGUAGAAUUCAC.......................................................... len:20 al:5
.......................AUGGCACUGGUAGAAUUCACGa........................................................ len:22 al:7
.......................AUGGCACUGGUAGAAUUCACGGu....................................................... len:23 al:3
........................UGGCACUGGUAGAAUUCACGG........................................................ len:21 al:1
...........................CACUGGUAGAAUUCACGG........................................................ len:18 al:1
.............................CUGGUAGAAUUCACGG........................................................ len:16 al:2
............................................................GUGAUUCCCCGGUGUCAUCC..................... len:20 al:2
............................................................GUGAUUCCCCGGUGUCAUCCAA................... len:22 al:2
............................................................GUGAUUCCCCGGUGUCAUCCA.................... len:21 al:4
.............................................................UGAUUCCCCGGUGUCAUCCAu................... len:21 al:3
.............................................................UGgUUCCCCGGUGUCAUCCA.................... len:20 al:2
.............................................................UGAUUCCCCGGUGUCAUCu..................... len:19 al:1
.............................................................UGAUUCCCCGGUGUCAUCCA.................... len:20 al:11
.............................................................UGAUUCCCCGGUGUCAUCC..................... len:19 al:3
.............................................................UGAUUCCCCGGUGUCAUCCAA................... len:21 al:1
.............................................................UGAUUCCCCGGUGUCAUCCAAGA................. len:23 al:2
.............................................................UGAUUCCCCGGUGUCAUCCAAu.................. len:22 al:1
.............................................................UGAUUCCCCGGUGUCAUCCAg................... len:21 al:1