Genome: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/data/genome_files/GCF_026571515.1_ASM2657151v2_genomic.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam Location: NW_026859351.1:102801-102901 plus PDF file name: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_16250.ps.pdf Locus Name: Cluster_16250 CAGGGAUGGACUUAUUCUGGUUGUGCAUUGUAGUUGCAUUGCAUGUCCUUCACACUGUGCAAUGUUCCUGCAGUGCAAUAACUGGGCUUGUCAUAGCAGCA ........(((....((((((((((((((((((..(((((((((((.......)).)))))))))..))))))))).)))))))))...)))......... (-35.20) .AGaGAUGGACUUAUUCUGGUU............................................................................... len:21 al:1 ....GAUGGACUUAUUCUGGUU............................................................................... len:18 al:3 .....AUGGACUUAUUCUGGUU............................................................................... len:17 al:1 ......................GUGCAUUGUAGUUGCAUUGCA.......................................................... len:21 al:5 ......................GUGCAUUGUAGUUGCAUUGC........................................................... len:20 al:5 ......................GUGCAUUGUAGUUGCAUUG............................................................ len:19 al:1 ......................GUGuAUUGUAGUUGCAUUGCA.......................................................... len:21 al:2 ...........................................................CAAUGUUCCUGCAGUGCAAU...................... len:20 al:4 ...........................................................CAAUGUUuCUGCAGUGCAAUAA.................... len:22 al:1 ...........................................................CAAUGUUCCUGCAGUGCAu....................... len:19 al:1 ...........................................................CAAUGUUCCUGCAGUGCAA....................... len:19 al:1 ...........................................................CAAUGUUCCUGCAGUGCAAUAg.................... len:22 al:2 ...........................................................CAAUGUUCCUGCAGUGCAAUAAaU.................. len:24 al:3 ...........................................................CAAUGUUCCUGCAGUGCAAUgA.................... len:22 al:8 ...........................................................CAAUGUcCCUGCAGUGCAAU...................... len:20 al:1 ...........................................................CAAUGUUCCUGCAGUGCAAUAA.................... len:22 al:5 ...........................................................CAAUGUUuCUGCAGUGCAAUA..................... len:21 al:1 ...........................................................CAAUGUUCCUGCAGUGCAAUAAu................... len:23 al:4 ...........................................................CAAUGUUCCUGCAGUGCAAUAAa................... len:23 al:5 ...........................................................CAAUGUUCCUGCAGUGCAAUAAg................... len:23 al:5 ...........................................................CAAUGUUCCUGCAGUGCAAUu..................... len:21 al:2 ...........................................................CAAUGUUCCUGCAGUGCAAaAA.................... len:22 al:1 ...........................................................CAAUGUUCCUGCAGUGCAAUA..................... len:21 al:12 ............................................................AAUGUUCCUGCAGUGCAAUAAaU.................. len:23 al:2 ............................................................AAUGUUCCUGCAGUGCAAUAAu................... len:22 al:1