Genome: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/data/genome_files/GCF_026571515.1_ASM2657151v2_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: NW_026859070.1:334241-334339 minus
PDF file name: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_15639.ps.pdf
Locus Name: Cluster_15639
AAAGAUCCUUAUUUAUGCUGUGAAAGACAUGGGUAGUGAGAUGUUUGUAGUUUAUCACCUUGCUAACCUGUCUUUUGCAGUGUUGUAGGGCCAGCUACU
......((((((..(((((((((((((((.((.(((((((.((............)).))))))).))))))))))))))))).))))))......... (-33.30)
AAAGAUCCUUAUUUAUGCUG............................................................................... len:20 al:1
..................UcUGAAAGACAUGGGUAGUGAGAUG........................................................ len:25 al:4
..................UcUGAAAGACAUGGGUAGUGAGAU......................................................... len:24 al:5
...................cUGAAAGACAUGGGUAGUGAGAU......................................................... len:23 al:14
...................cUGAAAGACAUGGGUAGUG............................................................. len:19 al:4
...................aUGAAAGACAUGGGUAGUGAGAUG........................................................ len:24 al:1
...................cUGAAAGACAUGGGUAGUGAGAUG........................................................ len:24 al:18
....................UGAAAGACAUGGGcAGUGAGA.......................................................... len:21 al:8
....................UGAAAGACAUaGGUAGUGAGAUGU....................................................... len:24 al:4
....................UGAAAGACAaGGGUAGUGAGAU......................................................... len:22 al:16
....................UGAAAGACAUGGGUAGUGcGAU......................................................... len:22 al:17
....................UGAAAGACgUGGGUAGUGAGA.......................................................... len:21 al:16
....................cGAAAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:4
....................UGAAAGACAUGGGUgGUGAGA.......................................................... len:21 al:8
....................UGAAAGACAUGGGUAGUGAGAUa........................................................ len:23 al:9805
....................UGAAAGACAUGGGUAGaGAGAU......................................................... len:22 al:4
....................UGAAAGACAUGGGUAGgGAGAU......................................................... len:22 al:4
....................UGAAAGgCAUGGGUAGUGAGAUGU....................................................... len:24 al:7
....................UGAAAGACAUcGGUAGUGAGAU......................................................... len:22 al:2
....................UuAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:9
....................UGAAAGACAUGGGUAGUaAGAU......................................................... len:22 al:14
....................UuAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:6
....................UGAAAGcCAUGGGUAGUG............................................................. len:18 al:1
....................UGAAAGACAUGGGUAGUGAaA.......................................................... len:21 al:13
....................UGAgAGACAUGGGUAGUGA............................................................ len:19 al:1
....................UGAuAGACAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UaAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:39
....................UGAcAGACAUGGGUAGUGAGAUG........................................................ len:23 al:20
....................UGAAAGgCAUGGGUAGUGAGA.......................................................... len:21 al:18
....................UGAAAGACAUGGGUAGgGAGAUG........................................................ len:23 al:6
....................UGuAAGACAUGGGUAGUG............................................................. len:18 al:2
....................UGAAAGACcUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGAuAUGGGUAGUGAGAUG........................................................ len:23 al:48
....................UGAuAGACAUGGGUAGUGAGAU......................................................... len:22 al:8
....................UGAAAGACgUGGGUAGUGA............................................................ len:19 al:1
....................UGAAAGcCAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGACAUGuGUAGUGAGAU......................................................... len:22 al:14
....................UGAAAGACAUuGGUAGUGAGAU......................................................... len:22 al:9
....................UGAAAGACAUGGGUAGUu............................................................. len:18 al:52
....................UGAAAGACAUGGGUcGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAGUGAGAaG........................................................ len:23 al:8
....................UGgAAGACAUGGGUAGUGAGAU......................................................... len:22 al:211
....................UGAAAGACAUGGGUAGUGAGgUGU....................................................... len:24 al:4
....................UGAAAGcCAUGGGUAGUGAGAUG........................................................ len:23 al:38
....................UGAAAGuCAUGGGUAGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGaAGUGAGAU......................................................... len:22 al:4
....................UGgAAGACAUGGGUAGUG............................................................. len:18 al:15
....................UGAAAGACAUGGaUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAUGaGUAGUGAGAU......................................................... len:22 al:167
....................cGAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:349
....................UGAAAGACAUGGGUuGUGAGAUG........................................................ len:23 al:31
....................UGAAAGACAUGGGgAGUGAGAU......................................................... len:22 al:32
....................UGAAAGACAUGGGcAGUGAGAU......................................................... len:22 al:90
....................UGAAAGACAUGGGUAGUGAGAUuUU...................................................... len:25 al:4
....................UGAAAGACAaGGGUAGUGAGAUG........................................................ len:23 al:33
....................UGuAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:39
....................UGAAAGACAUGuGUAGUGAGA.......................................................... len:21 al:2
....................UGAAAGACAUGGGUAGUGAcAU......................................................... len:22 al:1
....................UuAAAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:2
....................UGAAAGACAUGGGUAGUGAaAU......................................................... len:22 al:17
....................UGAAAGACAUGGGUAGUGAc........................................................... len:20 al:6
....................UcAAAGACAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGAaAUGGGUAGUGAGAUGU....................................................... len:24 al:4
....................UGAAAGACAUGGGaAGUGAGAUG........................................................ len:23 al:10
....................UGAAAGACAUGaGUAGUGAGA.......................................................... len:21 al:26
....................UGAAAGACgUGGGUAGUG............................................................. len:18 al:17
....................UGAAAGAuAUGGGUAGUGAGAU......................................................... len:22 al:22
....................UGAAAGACAUGGGUAGUG............................................................. len:18 al:4372
....................UGAAAGACAUGGGUAGUGAGc.......................................................... len:21 al:5
....................UGAAAGACAUGGGUcGUGAGAUG........................................................ len:23 al:25
....................UGAAAGACAcGGGUAGUG............................................................. len:18 al:6
....................UGAAAGuCAUGGGUAGUGAGAU......................................................... len:22 al:6
....................aGAAAGACAUGGGUAGUGAGA.......................................................... len:21 al:2
....................UGAAAGACgUGGGUAGUGAGAU......................................................... len:22 al:193
....................UGAAAGACAUGGGUAGUGc............................................................ len:19 al:1
....................UGuAAGACAUGGGUAGUGAGAU......................................................... len:22 al:20
....................UGAAAGACAUGGGUgGUGAGAU......................................................... len:22 al:120
....................UGAAcGACAUGGGUAGUGAGAU......................................................... len:22 al:15
....................gGAAAGACAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGAgAUGGGUAGUGAGAUG........................................................ len:23 al:1
....................UGgAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:360
....................UGAAAGACAUGGGUAGUGg............................................................ len:19 al:1
....................UGAAAGACAUGGGUAcUGAGAUG........................................................ len:23 al:1
....................UGAgAGACAUGGGUAGUGAGAUGUU...................................................... len:25 al:2
....................aGAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:75
....................UGAAAGACAUGGGUAGUc............................................................. len:18 al:12
....................UGAAAGACAUGGGgAGUGAG........................................................... len:20 al:1
....................UGAAAGACAUGGGUAGaG............................................................. len:18 al:11
....................UGAAAGACAcGGGUAGUGAGAUG........................................................ len:23 al:126
....................UGAuAGACAUGGGUAGUGAG........................................................... len:20 al:1
....................UaAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:36
....................UGAAAGACAUGGGUAGUGAGuUG........................................................ len:23 al:34
....................UGAAAGACAUGGGUAGUGAGcUG........................................................ len:23 al:18
....................UGAAAGACuUGGGUAGUGAGAU......................................................... len:22 al:26
....................UGAAAGACAUGaGUAGUG............................................................. len:18 al:11
....................UGAAgGACAUGGGUAGUGAGA.......................................................... len:21 al:17
....................UGAAAGACAUGGGgAGUGAGAUG........................................................ len:23 al:41
....................UGAAAGACAUGGGUAGUGgGAUGU....................................................... len:24 al:4
....................UGAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:81506
....................UGAAAGACuUGGGUAGUGAGAUG........................................................ len:23 al:57
....................UGAAAGACAUGGGUAGgG............................................................. len:18 al:4
....................UGAAAGACAUGGGUAGUuAGA.......................................................... len:21 al:1
....................UGAgAGACAUGGGUAGUGAGAUG........................................................ len:23 al:282
....................UGAAAGAuAUGGGUAGUG............................................................. len:18 al:2
....................UGAAAGACAUGGGUAaUG............................................................. len:18 al:3
....................UGAAAGACAUGGGUgGUGAG........................................................... len:20 al:2
....................UGgAAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:6
....................UGAAgGACAUGGGUAGUGAG........................................................... len:20 al:11
....................UGAAcGACAUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAcGACAUGGGUAGUGAGAUG........................................................ len:23 al:35
....................UGAcAGACAUGGGUAGUGAGAU......................................................... len:22 al:16
....................UGAAAGACAUGGGUAGUGAGAUGUUc..................................................... len:26 al:9
....................UGAAAGAaAUGGGUAGUGAGAU......................................................... len:22 al:27
....................UGAAAGACAUaGGUAGUG............................................................. len:18 al:1
....................UGAAAGACgUGGGUAGUGAGAUG........................................................ len:23 al:346
....................UGAAAGACAUGGGUAGcGAGAUG........................................................ len:23 al:181
....................UGAAAGACAcGGGUAGUGAGAUGUU...................................................... len:25 al:1
....................UGAcAGACAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAgGACAUGGGUAGUGA............................................................ len:19 al:1
....................UGAuAGACAUGGGUAGUGAGAUG........................................................ len:23 al:13
....................UGAAAGACAUGGGUAGUGcGAUG........................................................ len:23 al:20
....................UGAAAGACAUGGGUAGUGAGcU......................................................... len:22 al:13
....................gGAAAGACAUGGGUAGUG............................................................. len:18 al:1
....................UGAAAGACAUGGGUAGUGAGAUGUc...................................................... len:25 al:7
....................UGAAAGACAUGGGUAGc.............................................................. len:17 al:1
....................UGAAuGACAUGGGUAGUGAGAU......................................................... len:22 al:17
....................UGAAAGACAUGGGUAGaGAGAUG........................................................ len:23 al:14
....................UGAAAGACAUGGGUAGUGAGAgG........................................................ len:23 al:50
....................cGAAAGACAUGGGUAGUGAG........................................................... len:20 al:3
....................UGAAAGACcUGGGUAGUG............................................................. len:18 al:2
....................UGAAAGACAUaGGUAGUGAGA.......................................................... len:21 al:2
....................UGAAAGACAUGGGUAGUaAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAGUGAuAU......................................................... len:22 al:3
....................UGAAAGACAUGuGUAGUG............................................................. len:18 al:1
....................UGAAgGACAUGGGUAGUG............................................................. len:18 al:26
....................UGAAAGACAUGGGUAGUcAGAUG........................................................ len:23 al:1
....................UGAAAGcCAUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAgGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGACAUGGGUAGUGgGA.......................................................... len:21 al:18
....................UGgAAGACAUGGGUAGUGAG........................................................... len:20 al:4
....................UGAAAGACAUGGGcAGUG............................................................. len:18 al:12
....................UGAAAGACAUGGuUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGAuAUGGGUAGUGAGA.......................................................... len:21 al:1
....................UGAAAGACAUGGGUAGUGgG........................................................... len:20 al:13
....................UGAAAGACAUaGGUAGUGAGAU......................................................... len:22 al:35
....................UGAgAGACAUGGGUAGUGAGAU......................................................... len:22 al:141
....................aGAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:36
....................UGAAAGACAUGGGUAGUGgGAU......................................................... len:22 al:231
....................UGAAAGACAcGGGUAGUGAGAU......................................................... len:22 al:101
....................UGAAAGACAUGGGUAGUGAGAUuU....................................................... len:24 al:13
....................UGAAAGACAUGGGUAGaGA............................................................ len:19 al:1
....................UGAAAGACuUGGGUAGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGAaAUGGGUAGUG............................................................. len:18 al:3
....................UGAAAGACcUGGGUAGUGAGAU......................................................... len:22 al:10
....................UGAAAGACAUGGGUuGUGAGAU......................................................... len:22 al:10
....................UGAAAGuCAUGGGUAGUGAGAUG........................................................ len:23 al:21
....................UGAAAGACAUGGGUAGUGuGA.......................................................... len:21 al:1
....................UGcAAGACAUGGGUAGUGAGAU......................................................... len:22 al:9
....................UGAAAGACAUGGGUAGUGAGAcG........................................................ len:23 al:263
....................UGAAAGACAcGGGUAGUGAGA.......................................................... len:21 al:3
....................UGAAAGACAUGGGUcGUGAGA.......................................................... len:21 al:2
....................cGAAAGACAUGGGUAGUG............................................................. len:18 al:17
....................UGAAAGACAUGGGUAGUGAGAg......................................................... len:22 al:168
....................UGAAAGACAUGGGUAGUGu............................................................ len:19 al:4
....................UGAAuGACAUGGGUAGUG............................................................. len:18 al:1
....................UcAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:1
....................UGAAAGACAUGGcUAGUGAGAU......................................................... len:22 al:4
....................UGAAAGACAgGGGUAGUGAGAUG........................................................ len:23 al:26
....................UGAAAGACAUGGGgAGUGAGAUGU....................................................... len:24 al:2
....................UGAAAGACAUGGcUAGUG............................................................. len:18 al:1
....................UGAAAuACAUGGGUAGUGAGAUG........................................................ len:23 al:8
....................UGAAAGACAUGGGUA................................................................ len:15 al:3
....................UGAgAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:3
....................UGAAAGACAUGGGUAGUGAGuUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAGUGAGu.......................................................... len:21 al:31
....................UGAAAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:1069
....................UGAAAGACAUGGGUAuUGAGAUG........................................................ len:23 al:15
....................UGAAuGACAUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAgGGGUAGUGAGAU......................................................... len:22 al:14
....................UGAAAGACAUGGGUuGUG............................................................. len:18 al:1
....................UGcAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:18
....................UGcAAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAGUuAGAUG........................................................ len:23 al:6
....................UGAAAGACAUGGGUAGUGAGuU......................................................... len:22 al:30
....................UGAAgGACAUGGGUAGUGAGAUGU....................................................... len:24 al:11
....................UGAAAGACAUGGGUAaUGAGA.......................................................... len:21 al:1
....................UGcAAGACAUGGGUAGUG............................................................. len:18 al:1
....................UGAAAaACAUGGGUAGUG............................................................. len:18 al:3
....................UGAAAGACcUGGGUAGUGAGAUG........................................................ len:23 al:35
....................UGAAAGACAUGGGUAGUGA............................................................ len:19 al:111
....................UGAAAGACAUGGGUAGUGuGAUGU....................................................... len:24 al:1
....................UGAAgGACAUGGGUAGUGAGAUG........................................................ len:23 al:415
....................UGAAAGACcUGGGUAGUGAGA.......................................................... len:21 al:2
....................UGAAAGACAUGGuUAGUGAGAU......................................................... len:22 al:7
....................UGAAAGACAUGGGUAuUGAGAU......................................................... len:22 al:7
....................UGAAAGAaAUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAUGGGUAaUGAGAU......................................................... len:22 al:20
....................UGAAAGACAUGGGUAGUGAG........................................................... len:20 al:1311
....................UGAAAGACAUGGGUAGUGAGgU......................................................... len:22 al:422
....................UGAAAGACAUGGuUAGUGAGAUG........................................................ len:23 al:8
....................UGAAAGACAgGGGUAGUG............................................................. len:18 al:4
....................UGAAAGgCAUGGGUAGUGAG........................................................... len:20 al:7
....................UGAAAGACAcGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAUGGGUAGUGAGAUu........................................................ len:23 al:1159
....................UGAAAGgCAUGGGUAGUGAGAU......................................................... len:22 al:195
....................UGAAAGACAUGGGUAGcGAGA.......................................................... len:21 al:6
....................UGAAAGACAUGGGUAGUGAGAc......................................................... len:22 al:4702
....................UGAAAGuCAUGGGUAGUGAG........................................................... len:20 al:1
....................UGAAAGACAUGGGUAGUGAaAUG........................................................ len:23 al:18
....................UGAAAGACAUuGGUAGUGAGAUG........................................................ len:23 al:7
....................UGAAAGACuUGGGUAGUG............................................................. len:18 al:4
....................UGAAAGACAUGGGUAGUa............................................................. len:18 al:551
....................UGAAAaACAUGGGUAGUGAGAUG........................................................ len:23 al:20
....................UGAAAGACAUGGGUAGUuAGAU......................................................... len:22 al:3
....................UGAuAGACAUGGGUAGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAcUGAGA.......................................................... len:21 al:1
....................UGAAAGACAUGGGUcGUGAGAU......................................................... len:22 al:7
....................UGAAAGACAUGGGUAGUGAGAUGUaU..................................................... len:26 al:25
....................UGAAAGACAUGGaUAGUG............................................................. len:18 al:2
....................UGAAAGACAUGGGUAaUGAGAUG........................................................ len:23 al:41
....................UGAAAGACAUGuGUAGUGAGAUG........................................................ len:23 al:18
....................UGAAAGACAUGGGUAGUGAGAUaUU...................................................... len:25 al:3
....................UGAAAGACAUGcGUAGUGAGAUG........................................................ len:23 al:4
....................UGAAAGACAUGGGUAGaGAGAUGU....................................................... len:24 al:1
....................UGAAAGACgUGGGUAGUGAGAUGU....................................................... len:24 al:6
....................UGAAAGACAUGGGUAGU.............................................................. len:17 al:2
....................UGAAAGgCAUGGGUAGUG............................................................. len:18 al:19
....................aGAAAGACAUGGGUAGUG............................................................. len:18 al:2
....................UGAAAGACAUGaGUAGUGAG........................................................... len:20 al:8
....................UGAAAGACAUGGGUgGUGAGAUG........................................................ len:23 al:240
....................UGAAAGACAUGGGUAGUGAGgUG........................................................ len:23 al:477
....................UGAAAGACAUGGGUgGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGUAGUuAG........................................................... len:20 al:1
....................UGAAuGACAUGGGUAGUGAGAUGU....................................................... len:24 al:2
....................UGAAAGACAUGGaUAGUGAGAU......................................................... len:22 al:21
....................UGAAAGACAUGGGUAGUGAGAUGaU...................................................... len:25 al:90
....................UGAAAGACAUGGGgAGUGAGA.......................................................... len:21 al:1
....................UGAAAGACAUGcGUAGUGAGAUGU....................................................... len:24 al:1
....................UGgAAGACAUGGGUAGUGAGAUGUU...................................................... len:25 al:1
....................UGAAAGACAUGGGUAGUGgGAUG........................................................ len:23 al:446
....................UGAAAGACAUGGGUAGUGAGg.......................................................... len:21 al:43
....................UGAAAGACAaGGGUAGUG............................................................. len:18 al:1
....................UGAAAGACAUaGGUAGUGAGAUG........................................................ len:23 al:61
....................UGAAAGcCAUGGGUAGUGAGAU......................................................... len:22 al:18
....................UGAAAGACAUGGGUAGUGAa........................................................... len:20 al:140
....................UGAAAGACAUGGGUAGUGuG........................................................... len:20 al:1
....................UGAAAGACAUGGGUAGUGAGAUGUgU..................................................... len:26 al:6
....................UGAAAGACAUGGGUAGUGAGAUGUa...................................................... len:25 al:3
....................UGAAAGACAUGGGUAGUGAGAUGc....................................................... len:24 al:160
....................UGAAgGACAUGGGUAGUGAGAU......................................................... len:22 al:244
....................UGAAAGACAUGGGUAGUGAu........................................................... len:20 al:10
....................UGgAAGACAUGGGUAGUGAGA.......................................................... len:21 al:10
....................UGAAAGACAUGGGUAGUGAGAUGa....................................................... len:24 al:3051
....................UGAAAGACAUGGGUAGUGuGAU......................................................... len:22 al:32
....................UGuAAGACAUGGGUAGUGAG........................................................... len:20 al:2
....................UGAAAGACAUGGGUAGcGAGAU......................................................... len:22 al:92
....................UGAAAGACAUGGGUAGUGAGAUGg....................................................... len:24 al:47
....................gGAAAGACAUGGGUAGUGAGAUG........................................................ len:23 al:9
....................UGAAAGACAUGGGUAGUGAGAcGU....................................................... len:24 al:1
....................UGAAAGAaAUGGGUAGUGAGA.......................................................... len:21 al:4
....................UGAAAGACAUGGGUAGUGAGAUaU....................................................... len:24 al:8
....................UGAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:44413
....................UGAAAGACAUGGGUAGUGcGA.......................................................... len:21 al:2
....................UGAAAGACAUGGGgAGUG............................................................. len:18 al:8
....................UGAAAGACAUGGGUAGaGAG........................................................... len:20 al:1
....................UGAcAGACAUGGGUAGUG............................................................. len:18 al:1
....................UGAAAGACAUGGGcAGUGAGAUG........................................................ len:23 al:169
....................UGAAAGACgUGGGUAGUGAG........................................................... len:20 al:10
....................UGAAAGAaAUGGGUAGUGAGAUG........................................................ len:23 al:63
....................UGAAAGACAUGGGUAGUGAGAUGUUU..................................................... len:26 al:45
....................UGAAAGACAUGGGUAGUGuGAUG........................................................ len:23 al:55
....................UGAAAGACAUGGaUAGUGAGAUG........................................................ len:23 al:53
....................UGAgAGACAUGGGUAGUGAGA.......................................................... len:21 al:10
....................UGAAcGACAUGGGUAGUG............................................................. len:18 al:2
....................UGAAuGACAUGGGUAGUGAGAUG........................................................ len:23 al:39
....................UGAAAGACAUGGGUAGcG............................................................. len:18 al:16
....................UGAAAGACAUGGGcAGUGAGAUGU....................................................... len:24 al:1
....................UGAAAGACAUGGGcAGUGAG........................................................... len:20 al:2
....................UGAAAGACAUGGGUAGcGAGAUGU....................................................... len:24 al:3
....................UGAAAGACAUGGGUAGUaAGAUG........................................................ len:23 al:33
....................UGAAAGACAUGaGUAGUGA............................................................ len:19 al:5
....................UGAAAaACAUGGGUAGUGAGAU......................................................... len:22 al:9
....................UGAAAGACAUGGGUAGUGAGAUGaUU..................................................... len:26 al:14
....................UGAAAGACAUGGGUAGUGAcA.......................................................... len:21 al:1
....................UGAAAGACAUGGGUAGcGAG........................................................... len:20 al:4
....................UGAAAGACAUGGGUAGUGAuAUG........................................................ len:23 al:5
....................UGAAAGACAUGGGUAGUGAGA.......................................................... len:21 al:3000
....................UGAAAGACAUGGGUAGUGAGAUGUU...................................................... len:25 al:56
....................gGAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:7
....................UGAAAGACAUGGGUAGUGAGAUGgU...................................................... len:25 al:2
....................cGAAAGACAUGGGUAGUGAGA.......................................................... len:21 al:18
....................UGAAAGACAUGcGUAGUGAGAU......................................................... len:22 al:5
....................UGAgAGACAUGGGUAGUGAG........................................................... len:20 al:2
....................UGAAAGgCAUGGGUAGUGAGAUG........................................................ len:23 al:312
....................UGAAAGACAUGaGUAGUGAGAUG........................................................ len:23 al:97
....................UGAAAGgCAUGGGUAGUGA............................................................ len:19 al:1
....................cGAAAGACAUGGGUAGUGAGAU......................................................... len:22 al:187
....................UGAAAGACAUGGGUAGUGAGAa......................................................... len:22 al:376
.....................GAAAGACAUGGGUAGUGAGAUu........................................................ len:22 al:1
.....................GAgAGACAUGGGUAGUGAGAUG........................................................ len:22 al:1
.....................GAAAGACAUGGGUAGUGAGAa......................................................... len:21 al:1
.....................GAAAGACAUGGGUAGUGAGAU......................................................... len:21 al:13
.....................GAAAGcCAUGGGUAGUGAGAUG........................................................ len:22 al:1
.....................GAAAGACAUGGGUAGUGAGAc......................................................... len:21 al:1
.....................GAAAGACAUGGGUAGUGAGAUa........................................................ len:22 al:3
.....................GAAAGACAUGGGUAGcGAGAU......................................................... len:21 al:1
.....................GAAAGACAUGGGUAGUGAGAUG........................................................ len:22 al:80
.....................GAAAGACAUGGGUAGUG............................................................. len:17 al:3
.....................GAAAGACgUGGGUAGUGAGAUG........................................................ len:22 al:2
.....................GAAAGACAUGGGUgGUGAGAUG........................................................ len:22 al:1
.....................GAAAGACcUGGGUAGUGAGAUG........................................................ len:22 al:1
......................gAAGACAUGGGUAGUGAGA.......................................................... len:19 al:1
......................uAAGACAUGGGUAGUGAGAU......................................................... len:20 al:1
......................AAAGACAUGGGUAGUGAGAUa........................................................ len:21 al:2
......................AAAGACAUGGGUAGUGAGAUG........................................................ len:21 al:11
......................AAAGACAUGGGUAGUGAGA.......................................................... len:19 al:2
......................uAAGACAUGGGUAGUGAGAUG........................................................ len:21 al:7
......................AAAGACAUGGGUAGUGAGAU......................................................... len:20 al:5
......................AAAGACAUGGGUAGUGAGAUu........................................................ len:21 al:3
.......................AAGgCAUGGGUAGUGAGAUG........................................................ len:20 al:1
.......................AgGACAUGGGUAGUGAGAU......................................................... len:19 al:1
.......................AAGACAUGGGUAGUGAGAU......................................................... len:19 al:11
.......................AAGACAUGGGUAGUGAGAUa........................................................ len:20 al:4
.......................AAGACAUGGGUAGUGAGAUG........................................................ len:20 al:4
........................AGACAUGGGUAGUGAGAUG........................................................ len:19 al:2
........................AGACAUGGGUAGUGAGAU......................................................... len:18 al:2
...........................CAUGGGUAGUGAGAUG........................................................ len:16 al:1
.........................................................CCUUGCUAACCUGUCUUUUGCu.................... len:22 al:1
.........................................................CCUUGCUAACCUGUCUUUUGu..................... len:21 al:7
.........................................................CCUUGCUAACCUGUCUUUUGC..................... len:21 al:7
.........................................................CCUUGCUAACCUGUCUUUUGCA.................... len:22 al:13
..........................................................................UUGCAGgGUUGUAGGGCC....... len:18 al:2
...............................................................................GUGUUGUAGGGCCAGCUuCU len:20 al:1