Genome: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/data/genome_files/GCF_026571515.1_ASM2657151v2_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: NW_026858381.1:115128-115227 minus
PDF file name: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_14096.ps.pdf
Locus Name: Cluster_14096
AAAUGUAAUCUGUUGUAUAAACCCGUAGAUCCGAACUUGUGGUUUGUAUGAUAUAUUCGCAAGCUCGUACCUACUGGUCUGUAUUGCAGGUGACAACAUC
...(((.((((((.(((((.(((.((((...(((.(((((((..((((...)))).))))))).)))...)))).))).))))).)))))).)))..... (-31.10)
................AUcAACCCGUAGAUCCGAACUUG............................................................. len:23 al:1
................AUcAACCCGUAGAUCCGAACUUGUG........................................................... len:25 al:3
................AUAAACCCGUAGAUCCGAACUU.............................................................. len:22 al:1
.................aAAACCCGUAGAUCCGAACUUGU............................................................ len:23 al:7
.................UcAACCCGUAGAUCCGAACUUGU............................................................ len:23 al:3
.................UcAACCCGUAGAUCCGAACUUGUG........................................................... len:24 al:9
..................AAACCCGUAGAUCCGAACUUGUG........................................................... len:23 al:1
..................cAACCCGUAGAUCCGAACUUG............................................................. len:21 al:2
..................cAACCCGUAGAUCCGAACUUGU............................................................ len:22 al:43
..................uAACCCGUAGAUCCGAACUUGUG........................................................... len:23 al:1
..................AAACCCGUAGAUCCGAACUUGUGa.......................................................... len:24 al:1
..................cAACCCGUAGAUCCGAACUUGUGG.......................................................... len:24 al:1
..................cAACCCGUAGAUCCGAACUUGUG........................................................... len:23 al:82
..................AAACCCGUAGAUCCGAACUUGU............................................................ len:22 al:2
..................uAACCCGUAGAUCCGAACUUGU............................................................ len:22 al:1
...................AACCCGUAGAUCCGAACc............................................................... len:18 al:50
...................AACCgGUAGAUCCGAACUUGU............................................................ len:21 al:39
...................AACCCGUAGAUCCGAACUUGUGGU......................................................... len:24 al:13
...................AACCCGUAGAUCgGAACUUGU............................................................ len:21 al:52
...................AACCCGUAGAUCCGAACUUuU............................................................ len:21 al:26
...................AACgCGUAGAUCCGAACUUGU............................................................ len:21 al:60
...................AACCCGUAuAUCCGAACUUGUG........................................................... len:22 al:28
...................AACCCGUAGAUCCGAACUUGUGGaU........................................................ len:25 al:3
...................AACCCGUAGAUCCGAACUgG............................................................. len:20 al:22
...................AAuCCGUAGAUCCGAACUUGUG........................................................... len:22 al:192
...................AACuCGUAGAUCCGAACUUGUG........................................................... len:22 al:307
...................uACCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCCGAuCUUGU............................................................ len:21 al:43
...................AACCCGUAGAUCCGAACUUGUGGg......................................................... len:24 al:1
...................uACCCGUAGAUCCGAACUUGU............................................................ len:21 al:357
...................AACCCGUAGAUCCGAACUUGg............................................................ len:21 al:3650
...................AACCCGUAGAUCCuAACUUGU............................................................ len:21 al:25
...................AACCCGUAGAUCCGAACUUuUG........................................................... len:22 al:32
...................AACCCGUAGAUaCGAACUUG............................................................. len:20 al:3
...................gACCCGUAGAUCCGAACUUGUG........................................................... len:22 al:1161
...................AACCCGUAGAUgCGAACUUGUG........................................................... len:22 al:90
...................AACCCGUAGAUCCGcACUUGUG........................................................... len:22 al:64
...................AACCaGUAGAUCCGAACU............................................................... len:18 al:1
...................AACCCGUAGAUuCGAACUUG............................................................. len:20 al:8
...................AACCCGUgGAUCCGAACUUG............................................................. len:20 al:26
...................AACCCGUAGAUCCGAgCUUGU............................................................ len:21 al:985
...................AACCCGUgGAUCCGAACUUGU............................................................ len:21 al:708
...................AACCCGUAGAUCCGgACUUGUG........................................................... len:22 al:988
...................AACCCGUAGAUuCGAACUUGUG........................................................... len:22 al:221
...................AACCCGUgGAUCCGAACUUGUG........................................................... len:22 al:712
...................AACCCGUAGAUCCGAACcUG............................................................. len:20 al:18
...................AACCCuUAGAUCCGAACUUGUG........................................................... len:22 al:27
...................AACCCGUAGAaCCGAACUUGU............................................................ len:21 al:24
...................AACCCGUAGAUCuGAACUUGU............................................................ len:21 al:446
...................AACCCGUAGuUCCGAACUUGUG........................................................... len:22 al:42
...................AACCCGUAGAUCCGAACUaG............................................................. len:20 al:2
...................AgCCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:4
...................AACCCGUAGAUCCGAACUcGUGG.......................................................... len:23 al:1
...................AACCCGUuGAUCCGAACUUGUG........................................................... len:22 al:140
...................AACCCGUAGAUCgGAACUUGUG........................................................... len:22 al:50
...................AACCCGUgGAUCCGAACUUGUGG.......................................................... len:23 al:9
...................AACCCGUAGAUCCGAAuUUGU............................................................ len:21 al:288
...................AACCCGUAGAUCCGAACUUGUa........................................................... len:22 al:38718
...................AACCCGUAGAUCCGAACUaGU............................................................ len:21 al:57
...................AACCCGUAGAUCCuAACUUGUG........................................................... len:22 al:27
...................AACCCGUAGAUCCGAACgUGU............................................................ len:21 al:64
...................AACCCGUAGAgCCGAACUUGU............................................................ len:21 al:17
...................AACCCGUAGAUCCGAAuU............................................................... len:18 al:2
...................AACCCGUAGcUCCGAACUUGU............................................................ len:21 al:67
...................AACaCGUAGAUCCGAACUUGU............................................................ len:21 al:57
...................AACCCGUAGgUCCGAACUUGUGG.......................................................... len:23 al:9
...................AACCCGUAGAUCCGAACUUaU............................................................ len:21 al:183
...................cACCCGUAGAUCCGAACU............................................................... len:18 al:1
...................gACCCGUAGAUCCGAACUUG............................................................. len:20 al:36
...................AACCCGUAGAUCCGAACUUGUG........................................................... len:22 al:318139
...................AACCCGUAGAUCCaAACUUG............................................................. len:20 al:5
...................AACCCGUAGAUCCGAACUUGUGuU......................................................... len:24 al:257
...................AuCCCGUAGAUCCGAACUUG............................................................. len:20 al:1
...................AACCCGUAGAUCCGAACUUaUGG.......................................................... len:23 al:3
...................AACCCGcAGAUCCGAACUU.............................................................. len:19 al:2
...................AACCCGUAGAUCCGAACUUGcG........................................................... len:22 al:1418
...................AcCCCGUAGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAuAUCCGAACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGgACU............................................................... len:18 al:2
...................AACCCGUAGAUCCGgACUUGU............................................................ len:21 al:877
...................AAaCCGUAGAUCCGAACUUGU............................................................ len:21 al:12
...................AACCCGUAuAUCCGAACUUGU............................................................ len:21 al:23
...................AACCCGUAGAUCCGAACU............................................................... len:18 al:448
...................AACCCGUAGuUCCGAACUUGU............................................................ len:21 al:36
...................AACCCGUAGAUCCGAACUUcU............................................................ len:21 al:50
...................AACuCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCCGAACUUGUGcU......................................................... len:24 al:8
...................AACCCGUAGAUCCGAACUcGU............................................................ len:21 al:621
...................AACCCGUcGAUCCGAACUUGUGG.......................................................... len:23 al:1
...................AACCCGUAaAUCCGAACUUG............................................................. len:20 al:2
...................AAaCCGUAGAUCCGAACUUG............................................................. len:20 al:1
...................AACCaGUAGAUCCGAACUUGUG........................................................... len:22 al:53
...................gACCCGUAGAUCCGAACU............................................................... len:18 al:2
...................AACCCGUgGAUCCGAACU............................................................... len:18 al:3
...................AACCCGUAGgUCCGAACUUGU............................................................ len:21 al:1076
...................AACCCGUAGAUaCGAACUUGUG........................................................... len:22 al:16
...................AACCCcUAGAUCCGAACUUGUG........................................................... len:22 al:20
...................AACCCGUAGAUCCGAACa............................................................... len:18 al:15
...................AACCCGUAGAUCCGAAuUUGUG........................................................... len:22 al:166
...................AACCCGUcGAUCCGAACUUGUG........................................................... len:22 al:108
...................AACuCGUAGAUCCGAACUUGU............................................................ len:21 al:338
...................AACCCaUAGAUCCGAACUUGUGG.......................................................... len:23 al:1
...................AACCCuUAGAUCCGAACUUG............................................................. len:20 al:1
...................AACCCGUAGAUCCGAACUUGUGaU......................................................... len:24 al:941
...................AAgCCGUAGAUCCGAACUUGUG........................................................... len:22 al:25
...................AACCCGUAGAUCCGAACUUa............................................................. len:20 al:1103
...................AACgCGUAGAUCCGAACUUGUG........................................................... len:22 al:60
...................AACCCGUAGAUCaGAACUUGUG........................................................... len:22 al:66
...................AACCCGUAGAUCCGAACUUcUG........................................................... len:22 al:27
...................AACCCGUAGAUCCGAACUUGUuGU......................................................... len:24 al:1
...................AACCCGUAGAUCCGAACUUGUc........................................................... len:22 al:884
...................AACCCGUuGAUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCgGAACUUGUGG.......................................................... len:23 al:1
...................AACCCGUAGAUCCGAACUUGUGaUU........................................................ len:25 al:2
...................AAaCCGUAGAUCCGAACUUGUG........................................................... len:22 al:7
...................AACCCGUAGAUCCGAAaUUG............................................................. len:20 al:2
...................AACCCaUAGAUCCGAACUUGUG........................................................... len:22 al:254
...................AACCCGUAGAUCCGAAuUUG............................................................. len:20 al:4
...................AACCuGUAGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAGAUCCGAACUUc............................................................. len:20 al:24
...................AAuCCGUAGAUCCGAACUUG............................................................. len:20 al:5
...................AACCgGUAGAUCCGAACUUGUG........................................................... len:22 al:54
...................AACCCGUAGAUuCGAACUUGUGG.......................................................... len:23 al:1
...................AACCCGcAGAUCCGAACUUG............................................................. len:20 al:13
...................AACCCGUAGcUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUgCGAACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGAgCUUGUGG.......................................................... len:23 al:4
...................AACCCGUAGAUCCGAACUUGUGaUUUGU..................................................... len:28 al:1
...................AACCCGUAGAUCCuAACUUGUGG.......................................................... len:23 al:1
...................AACCCGUAGAUCCGAACUcG............................................................. len:20 al:27
...................AACCCGUAGAUCuGAACUUG............................................................. len:20 al:14
...................AACCCGUAGAUCCGAACUgGUG........................................................... len:22 al:220
...................AACCCGUAGAUCCGuACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGAAuUUGUGG.......................................................... len:23 al:1
...................AACCCGUAGAUCCGAACg............................................................... len:18 al:10
...................AACCCGUAGAUCCGgACUUG............................................................. len:20 al:29
...................AACCCGUAaAUCCGAACUUGUG........................................................... len:22 al:68
...................AACCCGUAGAUCCGAACUUGUuG.......................................................... len:23 al:1
...................AACCCGUAGAUaCGAACUUGU............................................................ len:21 al:10
...................AACCCGUAGAUCCGAACUcGUG........................................................... len:22 al:969
...................AACCCGUAGAUCCGAACUUGaG........................................................... len:22 al:125
...................AACCCGUAGAUCCGAuCUUGUG........................................................... len:22 al:42
...................AACCuGUAGAUCCGAACU............................................................... len:18 al:1
...................AACCuGUAGAUCCGAACUUG............................................................. len:20 al:18
...................AACCCGUAGAUCCGAgCUUG............................................................. len:20 al:33
...................AACCCGUAaAUCCGAACUUGU............................................................ len:21 al:64
...................AACCuGUAGAUCCGAACUUGU............................................................ len:21 al:394
...................AgCCCGUAGAUCCGAACUUGU............................................................ len:21 al:1207
...................AACCCGUAGAUuCGAACUUGU............................................................ len:21 al:206
...................AACCCGUAGAaCCGAACUUGUG........................................................... len:22 al:25
...................AACCCGUAGAUCCcAACUUGUG........................................................... len:22 al:8
...................AACCCGUAGAUCCGAACaUGU............................................................ len:21 al:61
...................AACCCGUAGAUCCGAACUUGgG........................................................... len:22 al:1075
...................AACCCaUAGAUCCGAACUUG............................................................. len:20 al:14
...................AACCCaUAGAUCCGAACUUGU............................................................ len:21 al:240
...................AgCCCGUAGAUCCGAACUU.............................................................. len:19 al:2
...................AAuCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCCGAACUUGUGu.......................................................... len:23 al:14500
...................AAgCCGUAGAUCCGAACUUGU............................................................ len:21 al:19
...................AACCCGUAGAUgCGAACUUGU............................................................ len:21 al:90
...................AACCCGUAGAaCCGAACUUG............................................................. len:20 al:1
...................AgCCCGUAGAUCCGAACUUGUG........................................................... len:22 al:1267
...................AACCCGUAGAUCCGAACaUGUG........................................................... len:22 al:109
...................AACCCGUAGAUCCGAcCUUGU............................................................ len:21 al:60
...................AACCCGUAGAUCCGAACUUGUGuUU........................................................ len:25 al:33
...................AACCCGUAGAUCCGAAaUUGUG........................................................... len:22 al:42
...................AACCCGUAGgUCCGAACUUGUG........................................................... len:22 al:1146
...................AACCaGUAGAUCCGAACUUGU............................................................ len:21 al:76
...................AACCCGUAGAUCCGAACcUGUGG.......................................................... len:23 al:5
...................AACCuGUAGAUCCGAACUUGUG........................................................... len:22 al:362
...................AACCCGUAGAUCgGAACUUG............................................................. len:20 al:4
...................AACCCGgAGAUCCGAACUUGUG........................................................... len:22 al:17
...................AACCCGUAcAUCCGAACUUGU............................................................ len:21 al:2
...................AuCCCGUAGAUCCGAACUUGU............................................................ len:21 al:160
...................AACCCGgAGAUCCGAACUUG............................................................. len:20 al:1
...................AACCCGUcGAUCCGAACUUG............................................................. len:20 al:5
...................AACCCGUAGAUCCGAACUg.............................................................. len:19 al:2
...................AACCCGUAGAUCCGAACUUGUGaUUU....................................................... len:26 al:1
...................AuCCCGUAGAUCCGAACUUGUGGU......................................................... len:24 al:1
...................AACCCGUAGAUCCGAAgUUGU............................................................ len:21 al:2
...................uACCCGUAGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAGAUCCGAACUUGUu........................................................... len:22 al:3232
...................AACCgGUAGAUCCGAACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGAgCU............................................................... len:18 al:2
...................AACCCGUAGAUCCaAACUUGUG........................................................... len:22 al:225
...................AACCCGUAGAUCCGAACUc.............................................................. len:19 al:35
...................AACCCGUuGAUCCGAACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGAACUUG............................................................. len:20 al:11037
...................AACCCGUAGAUCCGAACaUGUGG.......................................................... len:23 al:1
...................AACCCGUAGAUCCGAACUUGUGuUUU....................................................... len:26 al:2
...................uACCCGUAGAUCCGAACUUG............................................................. len:20 al:13
...................AACCCGUAGAcCCGAACUUGU............................................................ len:21 al:869
...................AACaCGUAGAUCCGAACUUGUGGU......................................................... len:24 al:1
...................uACCCGUAGAUCCGAACUUGUG........................................................... len:22 al:374
...................AACCCGUAGcUCCGAACUUGUG........................................................... len:22 al:73
...................AACCCuUAGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGgAGAUCCGAACUUGU............................................................ len:21 al:18
...................AACCCGUAGcUCCGAACUUG............................................................. len:20 al:6
...................AACCCGUAGgUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAGAUCCGuACUUGU............................................................ len:21 al:49
...................AACCCGUAGAcCCGAACUUGUGG.......................................................... len:23 al:9
...................AACCCGUAGAUCCGAACgUG............................................................. len:20 al:5
...................AACCCGUAGAUCCGAACUUGUGc.......................................................... len:23 al:1997
...................AACgCGUAGAUCCGAACUUG............................................................. len:20 al:3
...................AACCCaUAGAUCCGAACU............................................................... len:18 al:1
...................gACCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:7
...................AACCCGUAGAUCCGAACUUGU............................................................ len:21 al:298986
...................AACCCGUAGAUCCGAgCUUGUG........................................................... len:22 al:986
...................AACCCGUAGAUCuGAACUUGUG........................................................... len:22 al:451
...................AACCCGUAGAUCaGAACUUG............................................................. len:20 al:4
...................AACCCGUAGAUCCGAACUUGUaG.......................................................... len:23 al:4
...................AACCCGUAGAUCCGAACUUGUaGU......................................................... len:24 al:1
...................AACaCGUAGAUCCGAACUUGUG........................................................... len:22 al:54
...................AACCCGUuGAUCCGAACUUGU............................................................ len:21 al:108
...................AuCCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCCGAA................................................................. len:16 al:1
...................AACCCGaAGAUCCGAACUUGUG........................................................... len:22 al:16
...................AACCCGUAaAUCCGAACUUGUGG.......................................................... len:23 al:1
...................AACCCGcAGAUCCGAACUUGUGG.......................................................... len:23 al:4
...................AACCCGUAGAUCCGcACUUG............................................................. len:20 al:3
...................cACCCGUAGAUCCGAACUUG............................................................. len:20 al:10
...................AACCCGUAGAUgCGAACUUGUGG.......................................................... len:23 al:1
...................AACaCGUAGAUCCGAACUUG............................................................. len:20 al:1
...................AACCCGUAGAUCCGAACcUGUG........................................................... len:22 al:952
...................AACCCGUAGAUCuGAACUUGUGG.......................................................... len:23 al:1
...................AACCaGUAGAUCCGAACUUG............................................................. len:20 al:4
...................AACCCGUAGAUCCGAACaUG............................................................. len:20 al:1
...................AuCCCGUAGAUCCGAACUUGUG........................................................... len:22 al:152
...................AACCCGUcGAUCCGAACUUGU............................................................ len:21 al:85
...................AACCCGUuGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAGAUCCGAAaUUGU............................................................ len:21 al:38
...................AACCCGUAGAcCCGAACUUGUG........................................................... len:22 al:840
...................AcCCCGUAGAUCCGAACUUGUG........................................................... len:22 al:71
...................AACCCGUAGAUCCGAACUUaUG........................................................... len:22 al:190
...................AACCCGUAGgUCCGAACUUG............................................................. len:20 al:58
...................AACCCcUAGAUCCGAACUUGU............................................................ len:21 al:8
...................AACCCuUAGAUCCGAACUUGU............................................................ len:21 al:21
...................AACCCGUAGAUCCGAACgUGUG........................................................... len:22 al:41
...................AACCCGcAGAUCCGAACUUGU............................................................ len:21 al:529
...................AgCCCGUAGAUCCGAACUUG............................................................. len:20 al:41
...................gACCCGUAGAUCCGAACUUGU............................................................ len:21 al:1112
...................AACCCGaAGAUCCGAACUUGU............................................................ len:21 al:11
...................AACCCGUAGAUCCGAcCUUG............................................................. len:20 al:3
...................AACCCGUAGAUCCGAACgUGUGG.......................................................... len:23 al:2
...................AACCCGUAGAUCCGAACUUGa............................................................ len:21 al:5582
...................AACCCGUAGAUCCGAACUUGUGa.......................................................... len:23 al:92338
...................AACCCGUAGAUCaGAACUUGU............................................................ len:21 al:62
...................AACCCGUAGAUCCGAACUUGUGG.......................................................... len:23 al:2020
...................AACCCGgAGAUCCGAACUU.............................................................. len:19 al:1
...................AACCCGUAGAUCCGgACUUGUGG.......................................................... len:23 al:4
...................AACCCGUAGAcCCGAACUUG............................................................. len:20 al:27
...................AACCCGUAGAUCCGAACUUGc............................................................ len:21 al:40259
...................AACCCGUAGAUCCGAACUUGgGG.......................................................... len:23 al:6
...................AACCCGUAGAUCCGAAC................................................................ len:17 al:1
...................AACCCGUAGAUCCGAcCUUGUG........................................................... len:22 al:46
...................AACCCGUAGAUCCGcACUUGU............................................................ len:21 al:60
...................AcCCCGUAGAUCCGAACUUG............................................................. len:20 al:2
...................AACCCGUAGAUCCGAACUgGU............................................................ len:21 al:220
...................AACCCGUAGAUCCGAACUa.............................................................. len:19 al:8
...................AACCCGUAcAUCCGAACUUGUG........................................................... len:22 al:1
...................AcCCCGUAGAUCCGAACUUGU............................................................ len:21 al:72
...................AACCCGUAGAUCCGAACcUGU............................................................ len:21 al:644
...................AAuCCGUAGAUCCGAACUUGU............................................................ len:21 al:172
...................AACCCGcAGAUCCGAACUUGUG........................................................... len:22 al:561
...................AACCCGUAGAUCCGAACUaGUG........................................................... len:22 al:98
...................AACuCGUAGAUCCGAACUUG............................................................. len:20 al:8
...................cACCCGUAGAUCCGAACUUGU............................................................ len:21 al:217
...................cACCCGUAGAUCCGAACUU.............................................................. len:19 al:2
...................AACCCGUAGAUCCcAACUUGU............................................................ len:21 al:2
...................AACCCGUAGAUCCGAACcU.............................................................. len:19 al:1
...................AACCCGUAGAUCaGAACUUGUGG.......................................................... len:23 al:1
...................AACCCGUAGAgCCGAACUUGUG........................................................... len:22 al:17
...................AACCCGUAGAUCCGAACUU.............................................................. len:19 al:374
...................AACCCGUAGAUCCGAACUUGUGGUUUGU..................................................... len:28 al:1
...................AACCCGUAGAUCCGAACUUu............................................................. len:20 al:61
...................AACCCGUAGAUCCaAACUUGU............................................................ len:21 al:227
...................AACCCGUAGAUCCGuACUUGUG........................................................... len:22 al:48
...................AACCCGUAGAUCCGAACUUGUGGa......................................................... len:24 al:52
...................AACCCGUAGAUCCGAACUUGcGG.......................................................... len:23 al:3
...................AACCCGUAGAUCCGAACgU.............................................................. len:19 al:1
...................cACCCGUAGAUCCGAACUUGUG........................................................... len:22 al:256
...................AACCCGUAGAUCCGAAgUUGUG........................................................... len:22 al:3
....................ACCCGUAGAUCuGAACUUGUG........................................................... len:21 al:2
....................ACCCGUAGAUCCGAACUUGU............................................................ len:20 al:190
....................ACCCGUAGAUCCGAACUUGUa........................................................... len:21 al:18
....................AgCCGUAGAUCCGAACUUGU............................................................ len:20 al:1
....................ACCCGUAGAUCCGAACUUGUGG.......................................................... len:22 al:5
....................AaCCGUAGAUCCGAACUUG............................................................. len:19 al:1
....................ACCCGUAGAUCCGAACUUGUGa.......................................................... len:22 al:63
....................ACCCGUAGAUCCGAACUUGUc........................................................... len:21 al:4
....................ACCCGUAGAUCCGAACUUGg............................................................ len:20 al:3
....................ACCuGUAGAUCCGAACUUGUG........................................................... len:21 al:1
....................ACCCGUAGAUCCGAAuUUGU............................................................ len:20 al:1
....................ACCCGUAGAUCCGAACUUGcG........................................................... len:21 al:1
....................AaCCGUAGAUCCGAACUUGUG........................................................... len:21 al:26
....................ACCCGUAGAUCCGAACUUGa............................................................ len:20 al:4
....................ACCCGgAGAUCCGAACUUGU............................................................ len:20 al:1
....................ACCCaUAGAUCCGAACUUGU............................................................ len:20 al:1
....................ACCCGUAGAUCCGAACUU.............................................................. len:18 al:1
....................ACCuGUAGAUCCGAACUUGU............................................................ len:20 al:1
....................uCCCGUAGAUCCGAACUUGUG........................................................... len:21 al:1
....................AuCCGUAGAUCCGAACUUGUG........................................................... len:21 al:2
....................ACCCGUAGAUCCGgACUUGU............................................................ len:20 al:1
....................ACCCGUAGAUCCGAACUUGUu........................................................... len:21 al:1
....................ACCCGUAGAUCCGAACUUGUGc.......................................................... len:22 al:1
....................ACCCGUAGAUCCGAACUUGUG........................................................... len:21 al:162
....................ACCCGUAGAUCgGAACUUGU............................................................ len:20 al:2
....................AaCCGUAGAUCCGAACUUGU............................................................ len:20 al:19
....................ACCCGUAGAUCCGAACUUGc............................................................ len:20 al:29
....................ACCCGUAGAUCCGAACcUGUG........................................................... len:21 al:1
....................ACCCGUAGAUCCGAACUUGUGu.......................................................... len:22 al:7
....................ACCCGUAGAUCCGAACUUG............................................................. len:19 al:4
.....................CCCGUAGAUCCGAACUUGc............................................................ len:19 al:11
.....................CCCGUAGAUCCGAACUUGU............................................................ len:19 al:89
.....................CCCGUAGAUCCGAACUaGU............................................................ len:19 al:1
.....................CCCGUAGAUCCGAACUUGUa........................................................... len:20 al:11
.....................CCCGUAGAUCCGAACUUGUGu.......................................................... len:21 al:4
.....................CCCGUAGAUCCGAACUUGa............................................................ len:19 al:1
.....................CCuGUAGAUCCGAACUUGUG........................................................... len:20 al:1
.....................CCCGUAGAUCCGAACUUGUGa.......................................................... len:21 al:21
.....................CCCGUAGAUCCGAACUUGUu........................................................... len:20 al:3
.....................CCCGUAGAUCCGAACUUGUGG.......................................................... len:21 al:2
.....................CCCGUAGAUCCGAACUUGUGc.......................................................... len:21 al:1
.....................CCCGUAGAUCCGAACUUGUG........................................................... len:20 al:83
......................CCGUAGAUCCGAACUUGUa........................................................... len:19 al:19
......................CCaUAGAUCCGAACUUGU............................................................ len:18 al:2
......................CCaUAGAUCCGAACUUGUG........................................................... len:19 al:2
......................CCGUAGAUCCGAACUUGg............................................................ len:18 al:2
......................CCGUAGAUCCGAACUUGU............................................................ len:18 al:85
......................CCGUcGAUCCGAACUUGUG........................................................... len:19 al:2
......................CCGUAGAUCCaAACUUGUG........................................................... len:19 al:1
......................CCGUAGAUCCGgACUUGU............................................................ len:18 al:1
......................CCGUAGAUCCGAACUUGUGc.......................................................... len:20 al:1
......................CCGUAGAUCCGAACUUGc............................................................ len:18 al:13
......................CCGUAGAUCCGAACUUGUGa.......................................................... len:20 al:38
......................CCGUAGAUCCGAACUUGUGG.......................................................... len:20 al:3
......................CCGUAGAUCCGAACgUGUG........................................................... len:19 al:1
......................CCGUAGAUCCGAACUUGUu........................................................... len:19 al:1
......................CCGUAGAUCCGAACUcGUG........................................................... len:19 al:1
......................CCGUAGAUCCGAACUcGU............................................................ len:18 al:1
......................CCGUAGAUCCGAACUUGUG........................................................... len:19 al:83
......................CCGUAGAUCCGAACUUGUGGUUUGUAU................................................... len:27 al:1
.......................CGUAGAUCCGAACUUGUG........................................................... len:18 al:52
.......................uGUAGAUCCGAACUUGUG........................................................... len:18 al:1
.......................CGUAGAUCCGAACUUGUGc.......................................................... len:19 al:1
.......................CGUAGAUCCGAACUUG............................................................. len:16 al:1
.......................CGUAGAUCCGAACUUGUa........................................................... len:18 al:7
.......................CGUAGAUCCGAACUUGUGa.......................................................... len:19 al:23
.......................CGUAGAUCCGAACUUGUc........................................................... len:18 al:1
........................GUAGAUCCGAACUUGUGa.......................................................... len:18 al:7
........................GUAGAUCCGAACUUGUGu.......................................................... len:18 al:1
......................................................AUUCGCAAGCUCGUACCUACU......................... len:21 al:1
.......................................................UUCGCAAGCUCGUACCUACUGGUCU.................... len:25 al:1
.......................................................UUCGCAAGCUCGUACCUACUGG....................... len:22 al:2
........................................................UCGCAAGCUCGUACCUACUGGU...................... len:22 al:6
........................................................UCGCAAGCUCGUACCUACUGGUCUG................... len:25 al:1
........................................................UCGCAAGCUCGUACCUACUGGUu..................... len:23 al:2
........................................................UCGCAAGCUCGUACCUACUGGUC..................... len:23 al:1
..........................................................GCAAGCUCGUACCUACUGGUCU.................... len:22 al:1
..........................................................cCAAGCUCGUACCUACUGGUCUG................... len:23 al:1
...........................................................CAAGCUCGUACCUACUGGUCUGa.................. len:23 al:76
...........................................................CAuGCUCGUACCUACUGGUCUGU.................. len:23 al:1
...........................................................CgAGCUCGUACCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGUCUGUu................. len:24 al:2
...........................................................CAAGCUCGUACCUACUGGUuUGU.................. len:23 al:2
...........................................................CAAGCUCGUACCUAaUGGUCUG................... len:22 al:2
...........................................................CAcGCUCGUACCUACUGGUCUG................... len:22 al:2
...........................................................CAAGCUCGUACCUACUGaUCUG................... len:22 al:7
...........................................................CAAGCUCGcACCUACUGGUCU.................... len:21 al:2
...........................................................CAAGCUCGUACCUACUGGUCUGc.................. len:23 al:97
...........................................................CgAGCUCGUACCUACUGGUCUG................... len:22 al:14
...........................................................CAAGCUCGUACCUACUGGUCUGUAa................ len:25 al:2
...........................................................CAAGCUCGUACCUACUGGUC..................... len:20 al:5
...........................................................CAAGCUCGUACCUACUGGUCU.................... len:21 al:393
...........................................................CAAGCUCGUACCUACUGaUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACUaGUCUGU.................. len:23 al:1
...........................................................uAAGCUCGUACCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUAuUGGUCUG................... len:22 al:2
...........................................................CAAGCUCGUcCCUACUGGUCUGU.................. len:23 al:1
...........................................................CAAGCaCGUACCUACUGGUCUG................... len:22 al:6
...........................................................CAAGCUCGUACCUACcGGUCUG................... len:22 al:8
...........................................................CAAGCcCGUACCUACUGGUCUG................... len:22 al:14
...........................................................CuAGCUCGUACCUACUGGUCUGU.................. len:23 al:2
...........................................................CAAGCUCGUgCCUACUGGUCUGU.................. len:23 al:1
...........................................................uAAGCUCGUACCUACUGGUCUG................... len:22 al:14
...........................................................CAAGuUCGUACCUACUGGUCUG................... len:22 al:7
...........................................................CAAGCUCGUACCUACUGGUCc.................... len:21 al:61
...........................................................CAAGCUCGUACCUACUGGUuUG................... len:22 al:9
...........................................................CAAGCUCGUACCUACUGGUCUaU.................. len:23 al:1
...........................................................CAAGCUuGUACCUACUGGUCUG................... len:22 al:5
...........................................................CAAGCUCGUACCUAgUGGUCUG................... len:22 al:3
...........................................................CAAGCUCGUACCUACcGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGcCUG................... len:22 al:11
...........................................................CAAGCUCGUgCCUACUGGUCUG................... len:22 al:6
...........................................................CAAGCUCGUACCUACUGGUCUGg.................. len:23 al:9
...........................................................CAAGCUCGUACCUACUGGUCUG................... len:22 al:4063
...........................................................CcAGCUCGUACCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGUCg.................... len:21 al:5
...........................................................CAAGCUCGUACCaACUGGUCUG................... len:22 al:1
...........................................................CAAGCUCGUACCUACUGGUCcG................... len:22 al:19
...........................................................CAAGCUCGUACCUgCUGGUCUG................... len:22 al:11
...........................................................CAAGCUCGUACCUACUGGUCa.................... len:21 al:20
...........................................................CAAGCUCGUACCUAaUGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACaGGUCUG................... len:22 al:2
...........................................................CuAGCUCGUACCUACUGGUCUG................... len:22 al:3
...........................................................CAAGCUCGUACCUACUGGUCUGU.................. len:23 al:607
...........................................................CAAGCUCGUACCUACUGGUCcGU.................. len:23 al:2
...........................................................CAAGCUCGUACCcACUGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACUGGUCUGaA................. len:24 al:1
...........................................................CAAGCUCGUACuUACUGGUCUG................... len:22 al:2
...........................................................CAAGCUCGUACCUACUGGcCU.................... len:21 al:1
...........................................................CAAGCUCGUAaCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGUCUu................... len:22 al:70
...........................................................CAgGCUCGUACCUACUGGUCUG................... len:22 al:13
...........................................................CAAGCUCGUAuCUACUGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUAgUGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACUGGUuU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGUCgG................... len:22 al:11
...........................................................CAAGCUCGUACCUACUGaUC..................... len:20 al:1
...........................................................CAAGCUCGUACgUACUGGUCUG................... len:22 al:1
...........................................................CcAGCUCGUACCUACUGGUCUG................... len:22 al:4
...........................................................CAAGuUCGUACCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACaUACUGGUCUG................... len:22 al:1
...........................................................CAAGCUCGUACCUACUGGUaUG................... len:22 al:1
...........................................................CAAGCUCGUACCUAaUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUaGUCUG................... len:22 al:3
...........................................................CAAGCUCGUACCUgCUGGUCU.................... len:21 al:1
...........................................................CAAGCUCGUACCUACUGGUCUc................... len:22 al:10
...........................................................CgAGCUCGUACCUACUGGUCUGU.................. len:23 al:2
...........................................................CAAGCUCGUACCUgCUGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACUGGUCUa................... len:22 al:469
...........................................................CAAGCUCaUACCUACUGGUCU.................... len:21 al:1
...........................................................CAAGCUCaUACCUACUGGUCUG................... len:22 al:7
...........................................................CAAGCUCGUACCUACUGGUCaG................... len:22 al:8
...........................................................aAAGCUCGUACCUACUGGUCUG................... len:22 al:2
...........................................................CAAGCUCGUAuCUACUGGUCUG................... len:22 al:4
...........................................................CAAGCUCGUACCUACaGGUCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCcACUGGUCUG................... len:22 al:6
...........................................................CAAGCUCGUACCUACUGGU...................... len:19 al:1
...........................................................CAAGCUCGUACCUACUGGcCUGU.................. len:23 al:1
...........................................................CAAGCUCGUACCUACUGGgCUG................... len:22 al:3
...........................................................CAAGCUCGUACCUACcGGUCUGU.................. len:23 al:2
...........................................................CAAGCUCGcACCUACUGGUCUG................... len:22 al:11
...........................................................CAuGCUCGUACCUACUGGUCUG................... len:22 al:2
...........................................................CAAGaUCGUACCUACUGGUCUG................... len:22 al:1
............................................................AAGCUCGUACCUACUGGUCUGc.................. len:22 al:1
............................................................AAGCUCGUACCcACUGGUCUG................... len:21 al:1
............................................................AAGCUCGaACCUACUGGUCUG................... len:21 al:1
............................................................uAGCUCGUACCUACUGGUCUG................... len:21 al:1
............................................................AAGCUCGUACCUACUGGUCUu................... len:21 al:2
............................................................AAGCUCGUACuUACUGGUCUG................... len:21 al:1
............................................................AAGCUCGUACCUACUGGUCUa................... len:21 al:7
............................................................AAGCUCGUACCUACUGGUCUGU.................. len:22 al:8
............................................................AAGCUCGUACCUACUGGUCU.................... len:20 al:4
............................................................AAGCUCGUACCUACUGGUCUGa.................. len:22 al:1
............................................................AAGCUCGUACCUACUGGUCUG................... len:21 al:112
............................................................AAGCUCGcACCUACUGGUCUG................... len:21 al:1
.............................................................AGCUCGUACCUACUGGUCUGU.................. len:21 al:1
.............................................................AGCUCGUACCUACUGGUCUG................... len:20 al:9
...............................................................CUCGUACCUACUGGUCUa................... len:18 al:1